Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07117
- Subject:
- XM_017015107.1
- Aligned Length:
- 1194
- Identities:
- 670
- Gaps:
- 489
Alignment
Query 1 ATGGCGCTGCTGGATCTGGCCTTGGAGGGAATGGCCGTCTTCGGGTTCGTCCTCTTCTTGGTGCTGTGGCTGAT 74
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGCTGCTGGACCTGGCCTTGGAGGGAATGGCCGTCTTCGGGTTCGTCCTCTTCTTGGTGCTGTGGCTGAT 74
Query 75 GCATTTCATGGCTATCATCTACACCCGATTACACCTCAACAAGAAGGCAACTGACAAACAGCCTTATAGCAAGC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCATTTCATGGCTATCATCTACACCCGATTACACCTCAACAAGAAGGCAACTGACAAACAGCCTTATAGCAAGC 148
Query 149 TCCCAGGTGTCTCTCTTCTGAAACCACTGAAAGGGGTAGATCCTAACTTAATCAACAACCTGGAAACATTCTTT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCCCAGGTGTCTCTCTTCTGAAACCACTGAAAGGGGTAGATCCTAACTTAATCAACAACCTGGAAACATTCTTT 222
Query 223 GAATTGGATTATCCCAAATATGAAGTGCTCCTTTGTGTACAAGATCATGATGATCCAGCCATTGATGTATGTAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAATTGGATTATCCCAAATATGAAGTGCTCCTTTGTGTACAAGATCATGATGATCCAGCCATTGATGTATGTAA 296
Query 297 GAAGCTTCTTGGAAAATATCCAAATGTTGATGCTAGATTGTTTATAGGTGGCAAAAAAGTTGGCATTAATCCTA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAAGCTTCTTGGAAAATATCCAAATGTTGATGCTAGATTGTTTATAGGTGGCAAAAAAGTTGGCATTAATCCTA 370
Query 371 AAATTAATAATTTAATGCCAGGATATGAAGTTGCAAAGTATGATCTTATATGGATTTGTGATAGTGGAATAAGA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAATTAATAATTTAATGCCAGGATATGAAGTTGCAAAGTATGATCTTATATGGATTTGTGATAGTGGAATAAGA 444
Query 445 GTAATTCCAGATACACTTACTGACATGGTGAATCAAATGACAGAAAAAGTAGGCTTGGTTCACGGGCTGCCTTA 518
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTAATTCCAGATACGCTTACTGACATGGTGAATCAAATGACAGAAAAAGTAGGCTTGGTTCACGGGCTGCCTTA 518
Query 519 CGTAGCAGACAGACAGGGCTTTGCTGCCACCTTAGAGCAGGTATATTTTGGAACTTCACATCCAAGATACTATA 592
||||||||||||||||||||||||||||||||||||||||.|
Sbjct 519 CGTAGCAGACAGACAGGGCTTTGCTGCCACCTTAGAGCAGAT-------------------------------- 560
Query 593 TCTCTGCCAATGTAACTGGTTTCAAATGTGTGACAGGAATGTCTTGTTTAATGAGAAAAGATGTGTTGGATCAA 666
Sbjct 561 -------------------------------------------------------------------------- 560
Query 667 GCAGGAGGACTTATAGCTTTTGCTCAGTACATTGCCGAAGATTACTTTATGGCCAAAGCGATAGCTGACCGAGG 740
|||| |.|.|||| ||.|| ||.|||
Sbjct 561 ---GGAG----------TCTCGCTC-------TGTCG-------------------------------CCCAGG 583
Query 741 TTGGAGGTTTGCAATGTCCACTCAAGTTGCAATGCAAAACTCTGGCTCATATTCAATTTCTCAGTTTCAATCCA 814
.||||| ||||.||.| ||.|| ||| |||||| .|.||| .|||.|..|| ||.
Sbjct 584 CTGGAG---TGCAGTGGC----------GCGAT------CTC-GGCTCA-CTGCAA--GCTCCGCCTC---CCG 631
Query 815 GAATGATCAGGTGGACCAAACTACGAATTAACATGCTTCCTGCTACAATAATTTGTGAGCCAATTTCAGAATGC 888
| |.|||.| |||..| |||||| .||||..|.|
Sbjct 632 G---GTTCACG----CCATTC----------------TCCTGC---------------------CTCAGCCTCC 661
Query 889 TTTGTTGCCAGTTTAATTATTGGATGGG----CAG------CCCACCATGTGTTCAGATGGGATA--TTATGGT 950
|..||.|| |||| ||| .||||||||..| ||.|| ||.|.||
Sbjct 662 TGAGTAGC----------------TGGGACTACAGGTGCCCGCCACCATGCCT-------GGCTAATTTTTTGT 712
Query 951 ATTTTTCATGTGTCATTGCCTGGCATGGTTTATATTTGACTACATTCAACTCAGGGGTGTCCAGGGTGGCACAC 1024
|||||
Sbjct 713 ATTTT--------------------------------------------------------------------- 717
Query 1025 TGTGTTTTTCAAAACTTGATTATGCAGTCGCCTGGTTCATCCGCGAATCCATGACAATATACATTTTTTTGTCT 1098
Sbjct 718 -------------------------------------------------------------------------- 717
Query 1099 GCATTATGGGACCCAACTATAAGCTGGAGAACTGGTCGCTACAGATTACGCTGTGGGGGTACAGCAGAGGAAAT 1172
Sbjct 718 -------------------------------------------------------------------------- 717
Query 1173 CCTAGATGTA 1182
Sbjct 718 ---------- 717