Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07158
- Subject:
- NM_001256523.2
- Aligned Length:
- 1932
- Identities:
- 533
- Gaps:
- 1398
Alignment
Query 1 ATGGAGATCCCTGCCCCGGAGCCCGAGAAGACAGCTCTTTCCTCTCAGGATCCTGCTCTTTCCCTGAAAGAGAA 74
||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGATCCCTGCCCCGGAGCCCGAGAAGAC------------------------------------------ 32
Query 75 TCTCGAGGATATATCGGGTTGGGGTCTTCCCGAAGCCAGGTCCAAGGAATCGGTGAGTTTCAAGGATGTGGCTG 148
||||||||||||||||||||||||||||||
Sbjct 33 --------------------------------------------AGGAATCGGTGAGTTTCAAGGATGTGGCTG 62
Query 149 TGGACTTCACCCAGGAGGAGTGGGGTCAACTAGACTCCCCTCAGAGGGCCTTGTACCGGGATGTGATGTTGGAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 63 TGGACTTCACCCAGGAGGAGTGGGGTCAACTAGACTCCCCTCAGAGGGCCTTGTACCGGGATGTGATGTTGGAG 136
Query 223 AACTACCAGAACCTTCTTGCCCTAGGACCTCCACTGCACAAGCCAGATGTGATCTCTCATCTGGAACGAGGCGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 137 AACTACCAGAACCTTCTTGCCCTAGGACCTCCACTGCACAAGCCAGATGTGATCTCTCATCTGGAACGAGGCGA 210
Query 297 GGAGCCATGGAGCATGCAGAGGGAAGTCCCCAGAGGGCCCTGTCCAGAATGGGAGCTGAAGGCGGTGCCCTCTC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 211 GGAGCCATGGAGCATGCAGAGGGAAGTCCCCAGAGGGCCCTGTCCAGAATGGGAGCTGAAGGCGGTGCCCTCTC 284
Query 371 AACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAGCCCATCATGGAGCGGCCCCTCGGCGGGGCGCAGGCG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 285 AACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAGCCCATCATGGAGCGGCCCCTCGGCGGGGCGCAGGCG 358
Query 445 TGGGGGCGCCAGGCAGGTGCTCTGCAGAGGAGTCAGGCTGCGCCCTGGGCGCCCGCACCTGCCATGGCCTGGGA 518
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 359 TGGGGGCGCCAGGCAGGTGCTCTGCAGAGGAGTCAGGCTGCGCCCTGGGCGCCCGCACCTGCCATGGTCTGGGA 432
Query 519 CGTCCCTGTAGAGGAATTCCCCCTCAGGTGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGGGGGACCCTTGC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 433 CGTCCCTGTAGAGGAATTCCCCCTCAGGTGTCCCCTCTTCGCCCAGCAACGCGTTCCCGAGGGGGGACCCTTGC 506
Query 593 TGGACACACGCAAGAACGTCCAGGCCACTGAGGGCAGAACCAAGGCCCCCGCGAGACTGTGTGCAGGGGAAAAC 666
||||||||||||||||||||||||||||
Sbjct 507 TGGACACACGCAAGAACGTCCAGGCCAC---------------------------------------------- 534
Query 667 GCCTCCACGCCAAGTGAGCCAGAAAAGTTCCCCCAGGTGCGCCGGCAGCGCGGGGCGGGCGCCGGGGAGGGCGA 740
Sbjct 535 -------------------------------------------------------------------------- 534
Query 741 GTTCGTGTGCGGCGAGTGCGGGAAGGCGTTCCGCCAGAGCTCCTCCCTCACGCTGCACCGGCGCTGGCACAGCC 814
Sbjct 535 -------------------------------------------------------------------------- 534
Query 815 GGGAGAAGGCTTACAAGTGCGATGAATGCGGCAAGGCCTTCACCTGGAGCACCAACCTTCTGGAGCACCGGCGC 888
Sbjct 535 -------------------------------------------------------------------------- 534
Query 889 ATCCACACCGGCGAGAAGCCCTTCTTCTGCGGCGAGTGCGGGAAGGCCTTCAGCTGCCACTCGTCCCTCAACGT 962
Sbjct 535 -------------------------------------------------------------------------- 534
Query 963 GCACCAGCGCATCCACACGGGCGAGCGGCCCTACAAGTGCAGCGCCTGCGAGAAGGCCTTCAGCTGCAGCTCGC 1036
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1037 TGCTCAGCATGCACCTGCGGGTGCACACCGGCGAGAAGCCCTACCGGTGCGGCGAGTGCGGCAAGGCCTTCAAC 1110
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1111 CAGCGTACACACCTCACACGCCACCACCGCATCCACACGGGCGAGAAGCCCTACCAGTGCGGCTCCTGCGGCAA 1184
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1185 GGCCTTCACCTGCCACTCATCCCTCACCGTGCATGAGAAGATCCACAGCGGGGACAAGCCGTTCAAGTGCAGCG 1258
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1259 ACTGCGAGAAGGCCTTCAACAGCCGCTCGCGCCTCACCCTCCACCAGAGGACGCACACGGGCGAGAAGCCCTTC 1332
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1333 AAGTGCGCCGACTGCGGGAAGGGCTTCAGCTGCCACGCGTACCTGCTCGTGCACCGGCGCATCCACAGCGGCGA 1406
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1407 GAAGCCCTTCAAGTGCAACGAGTGCGGCAAAGCCTTCAGCTCCCACGCCTACCTCATCGTGCACCGGCGCATCC 1480
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1481 ACACAGGCGAGAAGCCCTTCGACTGCAGCCAGTGTTGGAAGGCCTTCAGCTGCCACTCGTCCCTCATCGTGCAC 1554
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1555 CAGCGCATCCACACCGGTGAGAAGCCCTACAAGTGCAGCGAGTGCGGCAGAGCCTTCAGCCAGAACCACTGTCT 1628
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1629 CATTAAACATCAGAAAATCCACTCCGGGGAGAAGTCGTTTAAGTGTGAGAAATGTGGGGAGATGTTCAACTGGA 1702
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1703 GCTCGCACCTCACTGAGCACCAGAGGCTGCACAGCGAGGGGAAGCCCTTGGCCATCCAGTTCAACAAACACCTG 1776
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1777 CTCAGCACATACTACGTGCCTGGCAGCCTGCTGGGTGCAGGGGATGCTGGACTGAGGGACGTGGATCCCATCGA 1850
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1851 CGCGCTGGATGTGGCAAAGCTCTTGTGCGTGGTTCCCCCCAGAGCTGGCAGGAATTTCTCCCTGGGGAGCAAAC 1924
Sbjct 535 -------------------------------------------------------------------------- 534
Query 1925 CTCGAAAC 1932
Sbjct 535 -------- 534
