Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07167
- Subject:
- XM_017027260.2
- Aligned Length:
- 1614
- Identities:
- 1031
- Gaps:
- 423
Alignment
Query 1 ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGGGACAGCAACCCAAAGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGAGTCTGTTCCAGAAGCAGGAGCACATGAAGAGTGGTC 296
.||.||.||.||||||||||||||.|||||||||.||||||
Sbjct 1 ---------------------------------ATGAAGACTTTTCCAGAAGCAGGACCACATGAAGGGTGGTC 41
Query 297 CTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAACCAGGTCTCAGGACTCTATCATAAATAACTCTCAGT 370
|||||||||.|||||||||.|||||||||..||.|||||||||.||||.|||||||.||||||.|.||||||||
Sbjct 42 CTGCCAGCAGATCTGGGAAGAAATTGCAAGTGATTTAACCAGGCCTCAAGACTCTACCATAAAGAGCTCTCAGT 115
Query 371 TCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCAGGACTACCCACAATTCATACAGGACAGAAACCTTCC 444
||||||||.|.|||||||.||.||||||||||||.|.|||||||.|.|.|||.||.||||||||||||||||||
Sbjct 116 TCTTTGAACAGGGTGATGCCCACTCCCAGGTTGAGGAAGGACTATCTATAATGCACACAGGACAGAAACCTTCC 189
Query 445 CAGGGTGGGAAGTGTAAACAGTCCTTCAGTGATGTTCCCATCTTTGATCTTCCTCAGCAGTTATACTCAGAAGA 518
.|..||||||||||||||||.||||||||||||.|..||||||||||||||||||||||..||..|||||.|||
Sbjct 190 AATTGTGGGAAGTGTAAACAATCCTTCAGTGATATGTCCATCTTTGATCTTCCTCAGCAAATACGCTCAGCAGA 263
Query 519 GAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATCTGTTACATCTCAGCTCTTCATGTTCATCAGAGAGTCC 592
|||||||.||.|.|||||||||||||||||||||.||||||||||||||||.||||||.|||||||||||||||
Sbjct 264 GAAGTCTCATTCCTGTGATGAGTGTGGAAAAAGCTTCTGTTACATCTCAGCGCTTCATATTCATCAGAGAGTCC 337
Query 593 ACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGGCAAGGAATTTAGTCAAAGCTCACATCTGCAAACTCAT 666
||.||||||||||||||||||.||||||.||||||||.||||||||.|||||.||.|.||||||||||||||||
Sbjct 338 ACCTGGGAGAGAAACTCTTTAAGTGTGACGTGTGTGGTAAGGAATTCAGTCAGAGTTTACATCTGCAAACTCAT 411
Query 667 CAGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAGCACT 740
|||||||||||.||||||||||||||.|||||||||||.||||||||||.|||.|||||..|||||||||||||
Sbjct 412 CAGAGAGTCCATACTGGAGAGAAACCTTTCAAATGTGAACAATGTGGGAGAGGCTTCAGATGTAGATCAGCACT 485
Query 741 TAATGTTCATCATAAATTACACACAGGAGAGAAACCTTACATTTGTGAGGCATGTGGGAAGGCCTTCATTCATG 814
||..||||||...||||||||||..||||||||||.|||.|.|||||||||||||||||.||||||||||||||
Sbjct 486 TACAGTTCATTGCAAATTACACATGGGAGAGAAACATTATAATTGTGAGGCATGTGGGAGGGCCTTCATTCATG 559
Query 815 ATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGGGGAGAAACCATTCAAATGTGATATATGTGGTAAGACC 888
|||.|||||||.||.|||||.|||||||.||.||.||||||||.||||||||||||||.||||||.||..||.|
Sbjct 560 ATTTCCAGCTTCAGAAACATCAGAGAATTCACACAGGGGAGAAGCCATTCAAATGTGAGATATGTAGTGTGAGC 633
Query 889 TTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGGTTCACACAGGAGAAAAACCATTTAGGTGTGATACATG 962
|||..|.||||||||||
Sbjct 634 TTCCGTCTTAGGTCAAG--------------------------------------------------------- 650
Query 963 TGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGGCATTGCATGGTCCACACAGGAGAGAAACCGTACAGAT 1036
.||||||||||||||..||||||||||||||.|||||||..||||..
Sbjct 651 ---------------------------TCTTAATAGGCATTGTGTGGTCCACACAGGAAAGAAACCAAACAGCA 697
Query 1037 GTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGATTTTTATAAGCATCAGGTGGTCCACACAGGAGAGAAA 1110
.||.|.|.|.||||||||||||.|||.|||||||.|||||.|.||||||||||..|.|||||||||||||||||
Sbjct 698 CTGGGGAATATGGAAAAGGCTTCATTCGTAGGCTGGATTTGTGTAAGCATCAGACGATCCACACAGGAGAGAAA 771
Query 1111 CCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCATGCCTTTTGAACCATCAGCGAGTCCACAG 1184
||||||||||||||||||||||||||||||||||||.|||||||.|..|||||||.|||||||||||||||||.
Sbjct 772 CCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGACGGTCCTCCTATCTTTTGATCCATCAGCGAGTCCACAC 845
Query 1185 TGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACAACTGTCTTCCCATCAGA 1258
||||
Sbjct 846 TGGA---------------------------------------------------------------------- 849
Query 1259 GATCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAGTGTGGGAAGGGCTATGTTACTAAGTTTAATCTTGAC 1332
|||||||||||.||||||||..|||||||||||.||||..|||||||||....|||||||
Sbjct 850 --------------GAAAAGCCATACAAATGTGACAAGTGTGGGAAGAGCTACATTACTAAGTCAGGTCTTGAC 909
Query 1333 TTGCACCAGAGGGTCCACACGGGAGAGAGACCTTATAATTGTAAGGAATGTGGGAAGAACTTTAGCCGGGCCTC 1406
||||||||.||.|.||||||.|||||||||||||||||.|||.|.||.||||||||||.||||||.|.||||||
Sbjct 910 TTGCACCATAGAGCCCACACAGGAGAGAGACCTTATAACTGTGATGACTGTGGGAAGAGCTTTAGACAGGCCTC 983
Query 1407 AAGTATTTTGAATCATAAGAGACTCCACTGCCAGAAAAAACCATTCAAATGTGAGGACTGTGGAAAGAGGCTTG 1480
|||||||||||||||||||||||||||.||||..|||||||||||||||||||||||.||||||||||.|||||
Sbjct 984 AAGTATTTTGAATCATAAGAGACTCCATTGCCGAAAAAAACCATTCAAATGTGAGGATTGTGGAAAGAAGCTTG 1057
Query 1481 TACACAGGACATACCGTAAAGACCAGCCGAGAGACTATAGTGGGGAAAACCCATCCAAATGTGAGGATTGTGGG 1554
||.||.||.||||||||||||||||.|..|.|.||.|.|||||.|||||.||||||||||||||.||.||||||
Sbjct 1058 TATACCGGTCATACCGTAAAGACCAACAAAAAAACCACAGTGGAGAAAATCCATCCAAATGTGAAGACTGTGGG 1131
Query 1555 AGACGCTACAAGAGGCGCTTGAATCTGGATATACTTTTATCATTATTTCTAAATGACACA 1614
|..|||||||||||||||||||||||.||||||.||||||||||||||.||||||||||.
Sbjct 1132 AAGCGCTACAAGAGGCGCTTGAATCTTGATATAATTTTATCATTATTTTTAAATGACACG 1191