Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07202
- Subject:
- NM_001267625.1
- Aligned Length:
- 1189
- Identities:
- 914
- Gaps:
- 173
Alignment
Query 1 ATGGCGACTGTCATTCACAACCCCCTGAAAGCGCTCGGGGACCAGTTCTACAAGGAAGCCATTGAGCACTGCCG 74
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGACTGTCATTCACAACCCCCTGAAAGCGCTTGGGGACCAGTTCTACAAGGAAGCCATTGAGCACTGCCG 74
Query 75 GAGTTACAACTCACGGCTGTGTGCAGAGCGCAGCGTGCGTCTTCCCTTCCTGGACTCACAGACTGGGGTGGCCC 148
|||.||||||||..|||||||.||||||||.|||||||||||.||||||||||||||.||||||||||||||.|
Sbjct 75 GAGCTACAACTCGAGGCTGTGCGCAGAGCGGAGCGTGCGTCTCCCCTTCCTGGACTCGCAGACTGGGGTGGCTC 148
Query 149 AGAACAACTGCTACATCTGGATGGAGAAGAGGCACCGAGGCCCAGGCCTTGCCCCGGGCCAGCTGTATACATAC 222
|||||||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||.||||.||||||
Sbjct 149 AGAACAACTGCTACATCTGGATGGAGAAGAGGCACCGCGGCCCAGGCCTCGCTCCGGGCCAGTTGTACACATAC 222
Query 223 CCTGCCCGCTGCTGGCGCAAGAAGAGACGACTGCACCCACCTGAAGATCCAAAACTGCGGCTGCTGGAGATAAA 296
||||||||||||||||||||||||.|||||.||||||||||.||.||.||||||||.||.||.|||||.||.||
Sbjct 223 CCTGCCCGCTGCTGGCGCAAGAAGCGACGATTGCACCCACCAGAGGACCCAAAACTACGACTCCTGGAAATCAA 296
Query 297 ACCTGAAGTGGAGCTTCCCCTGAAGAAGGATGGGTTCACCTCAGAGAGCACCACGCTGGAAGCCTTGCTCCGTG 370
|||.|||||.||.||.|||||||||||.|||||.||.|||||.|||||.|||||.||||||||||||||.||.|
Sbjct 297 ACCCGAAGTAGAACTGCCCCTGAAGAAAGATGGATTTACCTCTGAGAGTACCACACTGGAAGCCTTGCTTCGCG 370
Query 371 GCGAGGGGGTTGAGAAGAAGGTGGATGCCAGGGAGGAGGAAAGCATCCAGGAAATACAGAGGGTTTTGGAAAAT 444
|||||||.||.||||||||||||||||||||.||.|||||||||||||||||.|||||||||||||||||||||
Sbjct 371 GCGAGGGAGTAGAGAAGAAGGTGGATGCCAGAGAAGAGGAAAGCATCCAGGAGATACAGAGGGTTTTGGAAAAT 444
Query 445 GATGAAAATGTAGAAGAAGGGAATGAAGAAGAGGATTTGGAAGAGGATATTCCCAAGCGAAAGAACAGGACTAG 518
||||||||.||||||||||||||||||||.||||||||||||||.|||.||||||||||.|||||||||||.||
Sbjct 445 GATGAAAACGTAGAAGAAGGGAATGAAGAGGAGGATTTGGAAGAAGATGTTCCCAAGCGCAAGAACAGGACCAG 518
Query 519 AGGACGGGCTCACGGCTCTGCAGGGGGCAGGAGGAGGCACGACGCCGCCTCTCAGGAAGACCACGACAAACCTT 592
|||||||||||.||||||||||||.||.|||||||||||.||.|||||||||||||||||||||||||||||.|
Sbjct 519 AGGACGGGCTCGCGGCTCTGCAGGCGGAAGGAGGAGGCATGATGCCGCCTCTCAGGAAGACCACGACAAACCCT 592
Query 593 ACGTCTGTGACATCTGTGGCAAGCGCTACAAGAACCGACCGGGGCTCAGCTACCACTATGCTCACACTCACCTG 666
|||||||.|||||||||||||||||||||||||||||.||.||.||||||||||||||.|||||.|||||||||
Sbjct 593 ACGTCTGCGACATCTGTGGCAAGCGCTACAAGAACCGGCCAGGACTCAGCTACCACTACGCTCATACTCACCTG 666
Query 667 GCCAGCGAGGAGGGGGATGAAGCTCAAGACCAGGAGACTCGGTCCCCACCCAACCACAGAAATGAGAACCACAG 740
||||||||||||||.||.|||||.||||||||||||||.||.||||||||||||||||||||||||||||||||
Sbjct 667 GCCAGCGAGGAGGGAGACGAAGCCCAAGACCAGGAGACCCGATCCCCACCCAACCACAGAAATGAGAACCACAG 740
Query 741 GCCCCAGAAAGGACCGGATGGAACAGTCATTCCCAATAACTACTGTGACTTCTGCTTGGGGGGCTCCAACATGA 814
.||||||||||||||.||.||.|||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCCCAGAAAGGACCAGACGGGACAGTCATTCCTAATAACTACTGTGACTTCTGCTTGGGGGGCTCCAACATGA 814
Query 815 ACAAGAAGAGTGGGCGGCCTGAAGAGCTGGTGTCCTGCGCAGACTGTGGACGCTCTGCTCAT-----TTG---G 880
||||||||||||||.||||||||||||||||||||||.|||||||||||||||||||.|||| ||| |
Sbjct 815 ACAAGAAGAGTGGGAGGCCTGAAGAGCTGGTGTCCTGTGCAGACTGTGGACGCTCTGGTCATCCAACTTGCCTG 888
Query 881 GAG--------GA----GA---AGGCAGGAAGGAGA-----AGGAGGCAGCGGCCGCAGCACGTACCACGGAGG 934
.|| || || ||||||..| ||| |.|.|||||.| ||..|||
Sbjct 889 CAGTTCACTCTGAACATGACTGAGGCAGTTA--AGACCTACAAGTGGCAGTG--------------CATAGAG- 945
Query 935 ACTT----ATTCGGT-TCC--------ACGTC--AGAAAGTGACACGTCAA------CTTTCCGCGGCTTTGAT 987
| ||.|.|| ||| ||.|| ||||.| |||.|.| ||| ||.||||
Sbjct 946 ---TGTAAATCCTGTATCCTGTGTGGGACCTCGGAGAACG----ACGACCAGCTACTCTT-------CTGTGAT 1005
Query 988 GAGGACGAT-TTGGAAGAGCCTCGCTCCTGTCGAGGAC---------GCCGCAGTGGCCGGGGTTCGCCCACAG 1051
||...|||| .||| ||..|.|.||| || .||.||||||| |..||||.|||
Sbjct 1006 GACTGCGATCGTGG------CTATCACATGT-----ACTGTTTAAATCCCCCAGTGGC-----TGAGCCCCCAG 1063
Query 1052 CAGATAAAAAGG-----GCAGTTGC------------------------------------------------- 1071
|||| |.||.|||
Sbjct 1064 --------AAGGAAGCTGGAGCTGCCATTTATGCTGGGAGCTGCTCAAAGAGAAAGCATCAGCCTTTGGCTGCC 1129
Query 1072 ----- 1071
Sbjct 1130 AGGCC 1134