Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07388
- Subject:
- XM_017313494.1
- Aligned Length:
- 1746
- Identities:
- 1212
- Gaps:
- 354
Alignment
Query 1 ATGGCGGTGGCTGGGGCGGTGTCCGGGGAGCCGCTGGTGCACTGGTGCACCCAGCAGTTGCGGAAGACTTTCGG 74
|||||||||||||||||||.||.|.||||||||||.||.|||||||||||.||||||||||..||.|||||||.
Sbjct 1 ATGGCGGTGGCTGGGGCGGCGTACCGGGAGCCGCTAGTACACTGGTGCACACAGCAGTTGCAAAAAACTTTCGC 74
Query 75 CCTGGATGTCAGCGAGGAGATCATTCAGTACGTTTTGTCAATTGAGAGTGCTGAAGAGATACGAGAATATGTTA 148
||||||||||||||||||.|||||.||.||.||||||||||||||||.|||||||||.||||||||||||||.|
Sbjct 75 CCTGGATGTCAGCGAGGAAATCATACAATATGTTTTGTCAATTGAGAATGCTGAAGAAATACGAGAATATGTGA 148
Query 149 CTGATCTCCTCCAGGGAAATGAAGGCAAAAAAGGTCAATTCATAGAAGAACTTATAACCAAATGGCAAAAGAAT 222
|.||.||.||||||||||||||.||||||||.|||||||||||||||||.||||||||||||||||||||||||
Sbjct 149 CAGACCTTCTCCAGGGAAATGAGGGCAAAAAGGGTCAATTCATAGAAGATCTTATAACCAAATGGCAAAAGAAT 222
Query 223 GATCAGGAGTTGATTTCGGA-TCCTTTGCAGCAGTGCTTCAAAAAAGATGAAATTTTAGATGGGCAGAAATCAG 295
|||||.|||||.||.||.|| |||||| ||.||||||||.|.|||||||||||||||||||||.||||.|||||
Sbjct 223 GATCAAGAGTTCATCTCTGATTCCTTT-CAACAGTGCTTGAGAAAAGATGAAATTTTAGATGGACAGAGATCAG 295
Query 296 GCGACCATCTAAAGCGGGGTAGGAAGAAAGGGAGAAACAGACAGGAAGTTCCTGCATTTACTGAACCTGACACG 369
..|||||.|||||||||.||||||.||||||..||||||.|||||||||||||||||||.|||||||||||...
Sbjct 296 TGGACCAGCTAAAGCGGAGTAGGAGGAAAGGACGAAACAAACAGGAAGTTCCTGCATTTCCTGAACCTGACGTA 369
Query 370 ACTGCAGAGGTTAAAACACCTTTTGATTTGGCCAAGGCACAAGAGAACAGCAACTCCGTAAAGAAGAAGACAAA 443
.|||..|||||.|||||||||||.||||||||.|||||||||||.|.||.|||||||||||||||||||||||.
Sbjct 370 GCTGTGGAGGTCAAAACACCTTTAGATTTGGCTAAGGCACAAGAAAGCAACAACTCCGTAAAGAAGAAGACAAG 443
Query 444 GTTTGTCAATTTATACACAAGAGAGGGACAGGACAGGCTTGCAGTCCTGCTCCCTGGTCGTCACCCTTGTGATT 517
.||||||||||||||.|||||||||||||||||||..||||||||||||||.||||||||||||||.|||||||
Sbjct 444 ATTTGTCAATTTATATACAAGAGAGGGACAGGACAAACTTGCAGTCCTGCTTCCTGGTCGTCACCCGTGTGATT 517
Query 518 GCCTGGGCCAGAAGCACAAGCTCATCAATAACTGTCTGATCTGTGGGCGCATTGTCTGTGAACAAGAAGGCTCA 591
|||||||||||||||||||.||||||||||||||||||.||||||||||.||.||.|||||.||.||.||.|||
Sbjct 518 GCCTGGGCCAGAAGCACAAACTCATCAATAACTGTCTGGTCTGTGGGCGGATCGTTTGTGAGCAGGAGGGTTCA 591
Query 592 GGCCCTTGCTTATTCTGTGGCACTCTGGTGTGTACTCATGAGGAACAAGATATTTTACAGCGTGACTCAAACAA 665
|||||.|||||.|||||||||.||.|||||||||||.||||.|||||.||||||||||||||.|||||||||||
Sbjct 592 GGCCCCTGCTTGTTCTGTGGCTCTTTGGTGTGTACTAATGAAGAACAGGATATTTTACAGCGGGACTCAAACAA 665
Query 666 GAGCCAGAAACTGCTAAAGAAACTCATGTCAGGAGTGGAGAATTCTGGAAAGGTGGACATCTCTACCAAGGACC 739
.||.|||||||||||.|||||.|||||||||||.|..||||.||||||||||||||||.|||||||||||||||
Sbjct 666 AAGTCAGAAACTGCTGAAGAAGCTCATGTCAGGGGCAGAGACTTCTGGAAAGGTGGACGTCTCTACCAAGGACC 739
Query 740 TTCTTCCTCATCAAGAATTGCGAATTAAGTCTGGTCTGGAGAAGGCTATCAAGCATAAAGACAAACTGTTAGAG 813
|.||||||||||||||||..|||||.|||||||||.||||||||||||||||||||||.||.||||||||||||
Sbjct 740 TACTTCCTCATCAAGAATCCCGAATGAAGTCTGGTTTGGAGAAGGCTATCAAGCATAAGGAAAAACTGTTAGAG 813
Query 814 TTTGACAGAACTAGTATTCGAAGGACCCAAGTCATTGATGATGAGTCAGATTACTTTGCCAGTGATTCTAACCA 887
||.||||||||.|||||.||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||||
Sbjct 814 TTCGACAGAACGAGTATCCGAAGGACCCAAGTTATTGACGATGAATCAGATTACTTTGCCAGTGATTCTAACCA 887
Query 888 ATGGTTGTCCAAACTTGAGCGGGAAACCTTGCAGAAGCGAGAGGAGGAGCTGAGAGAACTTCGACACGCCTCTC 961
.|||.||||||||.|||||||.||||...|||||||.|||||||||||||||||||||||.|||||.|||||..
Sbjct 888 GTGGCTGTCCAAAGTTGAGCGAGAAATGCTGCAGAAACGAGAGGAGGAGCTGAGAGAACTCCGACATGCCTCCA 961
Query 962 GACTTTCTAAGAAGGTCACCATTGACTTTGCAGGAAGGAAGATCCTGGAAGAAGAAAATTCACTAGCAGAGTAT 1035
|||||||||||||.||.|||||||||||.||.||..||||||||||.|||||.||||||.||||||||||||||
Sbjct 962 GACTTTCTAAGAAAGTGACCATTGACTTCGCGGGGCGGAAGATCCTAGAAGATGAAAATCCACTAGCAGAGTAT 1035
Query 1036 CATAGCAGACTAGATGAGACAATACAGGCCATTGCCAATGGAACCTTGAACCAGCCACTGACCAAATTGGATAG 1109
||.|||||||||||||||||||||||.||||||||||.|||.||.|||||||||.|||||..||..||||||||
Sbjct 1036 CACAGCAGACTAGATGAGACAATACAAGCCATTGCCAGTGGGACTTTGAACCAGTCACTGGTCACGTTGGATAG 1109
Query 1110 ATCTTCTGAAGAGCCTTTGGGAGTTCTGGTAAATCCCAACATGTACCAGTCCCCTCCCCAGTGGGTTGACCACA 1183
|||||.|||||||||||||||||||||||||||.||.||||||||||||.||.||||.||||||||||||.|||
Sbjct 1110 ATCTTGTGAAGAGCCTTTGGGAGTTCTGGTAAACCCTAACATGTACCAGGCCTCTCCTCAGTGGGTTGACAACA 1183
Query 1184 CAGGTGCAGCCTCACAGAAGAAGGCTTTCCGTTCTTCAGGATTTGGACTAGAGTTCAACTCATTTCAGCACCAG 1257
|.||..||.||.|||||||||||.|||..|..||..|||||....||||||||..||..|.|..||||||||||
Sbjct 1184 CTGGCTCAACCCCACAGAAGAAGACTTCACTCTCGGCAGGACCAAGACTAGAGCCCAGTTTACATCAGCACCAG 1257
Query 1258 CTGCGAATCCAGGATCAAGAATTTCAGGAAGGCTTTGATGGTGGCTGGTGCCTCTCTGTACATCAGCCCTGGGC 1331
||||||||||||||.||||||||.|||||||||||||||||.|||||||||||.|||.|.||||||||||||||
Sbjct 1258 CTGCGAATCCAGGACCAAGAATTCCAGGAAGGCTTTGATGGCGGCTGGTGCCTGTCTATGCATCAGCCCTGGGC 1331
Query 1332 TTCTCTGCTTGTCAGAGGGATTAAAAG-GGTGGAGGGCAGATCCTGGTACACCCCCCACAGAGGACGACTTTG- 1403
|||||||||||||||.||||||||||| |.|.||...||.||.| .|||| ||..|.||
Sbjct 1332 TTCTCTGCTTGTCAGGGGGATTAAAAGTGCTAGACATCAAATTC--------------AAGAG--CGTGTCTGT 1389
Query 1404 GATAGCAGCCACAGCTAAAAAACCCTCCCCTCAAGAAGTCTCAGAACTCCAGGCTACATATCGTCTTCTTCGTG 1477
|.|||.
Sbjct 1390 GCTAGA-------------------------------------------------------------------- 1395
Query 1478 GGAAAGATGTGGAATTTCCTAATGACTATCCGTCAGGTTGTCTTCTGGGCTGTGTGGACCTAATTGACTGCTTG 1551
Sbjct 1396 -------------------------------------------------------------------------- 1395
Query 1552 TCCCAGAAGCAATTTAAGGAGCAGTTTCCAGACATCAGTCAAGAATCTGATTCTCCATTTGTTTTCATCTGCAA 1625
Sbjct 1396 -------------------------------------------------------------------------- 1395
Query 1626 AAATCCTCAGGAAATGGTTGTGAAGTTTCCTATTAAAGGAAATCCAAAAATCTGGAAATTGGATTCCAAGATCC 1699
Sbjct 1396 -------------------------------------------------------------------------- 1395
Query 1700 ATCAAGGAGCAAAGAAGGGGTTAATGAAGCAGAATAAAGCTGTC 1743
Sbjct 1396 -------------------------------------------- 1395
