Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07403
- Subject:
- XM_006515559.2
- Aligned Length:
- 4507
- Identities:
- 1118
- Gaps:
- 3263
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTTTACCCTCCACTCAGTTTTCTTCACCTTGAAGGTGAGCATCTTTCTGGGCTCCCTGGTGGGGCTTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGGGTCTGGAGTTCATGGGCCTTCCTAACCAGTGGGCCCGCTACCTGCGTTGGGATGCAAGCACGCGCAGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCTGAGCTTCCAGTTCAAGACCAATGTTTCCACTGGGCTGCTCCTGTATTTGGATGATGGTGGTGTCTGTGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCCTCTGTCTCTCCCTGGTGGATGGCCGCGTTCAGCTCCGCTTTAGCATGGACTGTGCCGAGACCACTGTGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATCCAACAAGCAGGTGAACGACAGCAGTTGGCACTTCCTCATGGTGAGCCGTGATCGTGTGCGCACTGGGCTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGATTGATGGTGAGGGCCAGTCTGGAGAGCTACGGCCCCAGCGGCCTTATATGGATGTGGTCAGTGATTTGTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCGGTGGCGTCCCCGCTGACATTCGACCTTCTGCCCTGACCCTCGATGGAGTACAGAGCATGCCTGGCTTTAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGATTAATGCTGGATCTCAAGTATGGCAACTCGGAACCTCGGCTTCTGGGGAGCCAGAGCGTCCAGTTAGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGAGGGACCCTGTGGCGAGCGTCCCTGTGAAAATGGTGGGATCTGCTTCCTCTTGGATGGTCATCCCACCTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACTGTTCTACCACTGGCTATGGTGGCACACTCTGCTCAGAAGATGTCAGTCAAGGTCCAGGCCTCTCCCATCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATGATGAGTGAACAAGGTAGAAGTAAAGCACGAGAGGAGAACGTGGCCACCTTCCGAGGCTCAGAGTATCTGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTATGACCTGTCCCAGAACCCCATCCAGAGCAGCAGCGACGAAATCACCCTTTCCTTTAAGACCTGGCAACGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATGGGCTCATCCTCCACACTGGCAAGTCGGCCGACTATGTTAACCTGGCTCTGAAGGATGGTGCGGTCTCCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGTCATTAACCTGGGGTCCGGGGCCTTTGAGGCCATTGTGGAGCCAGTGAATGGGAAATTCAACGACAACGCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCATGATGTCAAAGTGACACGCAATCTTCGGCAGCACTCAGGCATCGGACACGCTATGGTGACAATCTCTGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATGGCATCCTAACCACAACGGGCTACACTCAAGAGGACTACACCATGCTGGGCTCAGATGACTTCTTCTATGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGGTGGAAGCCCAAGTACCGCAGACTTGCCAGGTTCACCTGTGAGCAACAACTTCATGGGCTGCCTTAAAGAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGTTTATAAGAATAATGACATCCGTCTAGAGCTGTCTCGCTTGGCCCGGATTGGAGACACCAAGATGAAAATC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATGGTGAAGTTGTGTTCAAGTGTGAGAACGTGGCCACACTGGATCCCATCAACTTTGAGACCCCAGAGGCTTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CATCAGCTTGCCCAAGTGGAACACCAAACGTATGGGCTCCATTTCCTTTGACTTTCGCACCACTGAGCCCAACG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCCTGATTCTCTTCACTCACGGGAAGCCTCAAGAAAGGAAAGATGTCCGGAGCCAAAAGAACACAAAAGTTGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTCTTTGCTGTGGAACTTCTTGATGGCAACCTGTATTTGCTGCTTGACATGGGCTCTGGCACCATCAAAGTGAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGCCACTCAGAAGAAGGCCAATGATGGGGAATGGTACCACGTGGATATTCAGCGTGATGGCAGATCAGGTACCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TATCTGTGAACAGCAGGCGCACGCCATTCACCGCCAGTGGGGAGAGTGAAATTCTCGACCTGGAGGGGGACATG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TATCTGGGCGGGCTGCCAGAGAACCGAGCTGGCCTCATCCTCCCCACGGAGCTCTGGACCGCCATGCTCAACTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CGGTTACGTGGGCTGCATCCGCGACCTGTTCATCGATGGGCGCAGCAAGAACATCCGGCAGCTGGCGGAGATGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGAACGCAGCAGGCGTCAAGTCCTCCTGTTCACGCATGAGCGCCAAGCAGTGTGACAGCTACCCCTGCAAGAAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AACGCGGTGTGCAAGGACGGCTGGAACCGCTTCATCTGCGACTGCACTGGCACCGGCTACTGGGGGAGAACCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CGAAAGAGAGGCATCTATCCTGAGCTATGACGGCAGCATGTACATGAAGGTCATCATGCCCATGGTGATGCACA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CGGAGGCAGAGGATGTGTCCTTCCGCTTCATGTCACAGCGAGCCTATGGGCTACTGGTAGCCACAACCTCCAGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GATTCTGCAGATACACTGCGTCTAGAGTTGGATGGTGGGCGTGTCAAGCTCATGGTTAACTTAGACTGTATCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GATAAACTGTAACTCCAGCAAAGGACCTGAGACCCTGTATGCAGGGCAGAAGCTCAATGACAATGAGTGGCACA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CCGTCCGGGTAGTGCGGAGAGGAAAAAGCCTTAAGCTAACAGTGGATGATGATGTGGCTGAGGGGACAATGGTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGCGACCACACCCGCCTGGAATTCCACAATATTGAAACTGGTATCATGACTGAGAAGCGTTACATCTCTGTGGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCCCTCCAGTTTCATTGGCCATCTACAGAGCCTCATGTTCAATGGCTTACTGTACATTGATTTGTGCAAAAATG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCGACATCGACTACTGTGAACTGAAGGCTCGCTTTGGACTGAGAAACATCATCGCCGACCCTGTCACTTTTAAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACCAAGAGCAGCTACCTGACCCTCGCCACCCTACAGGCTTACACCTCCATGCACCTCTTCTTCCAGTTCAAGAC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CACTTCAGCTGATGGCTTCATTCTCTTCAATAGCGGAGATGGCAATGATTTTATTGCAGTTGAGCTGGTCAAGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGTACATACACTATGTGTTTGATCTCGGCAATGGTCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCTGAAT 2886
Query 1 ---------------------------------------------ATGCAC---CTGA-----GAATCCACGCG 21
|..||| |||| ||..|||.|..
Sbjct 2887 GACAACCAGTGGCACAACGTGGTCATCACCAGGGACAGCAGTAACACCCACAGTCTGAAGGTGGACACCAAGGT 2960
Query 22 AG---------------ACGGAGCC------CT---------------CCTC------GCCGGC--------CG 45
|| |.||.||| || |||| ||.||| .|
Sbjct 2961 AGTCACTCAGGTCATCAATGGTGCCAAAAATCTGGATTTGAAAGGTGACCTCTATATGGCTGGCTTAGCCCAGG 3034
Query 46 GCCTGGAC--------------GCTTGGGATCTGGTTCCTGTTCTGGGGATGTATCGTCAG-----------CT 94
||.||.|| ||||| ||| || ||..||||||.|| .|||| ||
Sbjct 3035 GCATGTACAGCAACCTTCCCAAGCTTG-----TGG--CC---TCCAGGGATGGAT-TTCAGGGCTGCCTGGCCT 3097
Query 95 CTGTATGGAGTTCTTCTAATGTA--GCTTCCT--CCTCCTCCAC----CTCTTCC---------------TCG- 144
||| ||||.|| .||||.| .||.||| .|||.||.|| ||| ||| |||
Sbjct 3098 CTG--TGGACTT----GAATGGACGCCTGCCTGATCTCATCAACGATGCTC-TCCACAGGAGTGGACAGATCGA 3164
Query 145 ---------------------------------CCGG---GGTCTCA-------CTCTCAGCACGA-----GCA 170
||.| ||.|.|| ||.||||.|.|| ||.
Sbjct 3165 GCGAGGCTGTGAAGTTGCGTTGACCAAAGCTGACCTGCAAGGACCCAGTACAACCTGTCAGGAGGATTCATGCG 3238
Query 171 CCA---------TTTCCATGGCAGC-------AAGCATCACTCAGTGCCTATTTCTATCTATCGTTCC------ 222
||| |||.||| ||||| |.|..|||| |.|||.|| |.|||
Sbjct 3239 CCAACCAGGGAGTTTGCAT-GCAGCAGTGGGAAGGTTTCAC-CTGTGACT-------------GCTCCATGACA 3297
Query 223 -CCTGTTTCCCTTCGAGGAGGAC----------ACGCTGGCGCTACGTACATCTTTGGGAAAAGTGGTGGGCTT 285
|.|.|| || ||| .|| ||.||||.||.||.|||||||||||||||||.|||||.||.
Sbjct 3298 TCATATT---CT----GGA-AACCAGTGCAATGACCCTGGTGCAACATACATCTTTGGGAAAAGCGGTGGCCTC 3363
Query 286 ATCCTCTACACCTGGCCAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGGCTTCAGCACCAC 359
||||||||.|||||||||||.||||||||.||||||||.||.||||||||.||.|||||||||||||||||.||
Sbjct 3364 ATCCTCTATACCTGGCCAGCAAATGACAGACCCAGCACACGCTCTGACCGTCTCGCCGTGGGCTTCAGCACTAC 3437
Query 360 TGTGAAGGATGGCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGAAC 433
||||||||||||.|||||.||.|||||.|||||.||.||.||||||||.|||||||||||||||||||||||||
Sbjct 3438 TGTGAAGGATGGTATCTTAGTACGCATTGACAGCGCCCCTGGACTTGGCGACTTCCTCCAGCTTCACATAGAAC 3511
Query 434 AGGGGAAAATTGGAGTTGTCTTCAACATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGAACCCCTGTAAAT 507
|.|||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.|||||.|||
Sbjct 3512 AAGGGAAAATTGGAGTTGTCTTCAATATTGGCACAGTTGACATCTCCATCAAAGAAGAGAGAACTCCTGTCAAT 3585
Query 508 GACGGCAAATACCATGTGGTACGCTTCACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGACAACTGGCCAGT 581
||.|||||||||||.||.||.||||||||||||||.||.||.||.||.||.||.||||||||||||||||||||
Sbjct 3586 GATGGCAAATACCACGTTGTGCGCTTCACCAGGAATGGGGGAAATGCTACACTTCAGGTGGACAACTGGCCAGT 3659
Query 582 GAATGAACATTATCCTAC-------------------------------------------------------- 599
||||||.||.||||||||
Sbjct 3660 GAATGAGCACTATCCTACAGGCAACACTGATAATGAACGCCTCCAAATGGTAAAACAGAAAATCCCCTTCAAAT 3733
Query 600 ----------------------------------AGGCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAATA 639
||||||||||.||||||||||||||||.||||||||||||
Sbjct 3734 ATAACCGGCCCGTAGAGGAGTGGCTGCAGGAAAAAGGCCGGCAGCTAACCATCTTCAACACCCAGGCGCAAATA 3807
Query 640 GCCATTGGTGGAAAGGACAAAGGACGCCTCTTCCAAGGCCAACTCTCTGGGCTCTATTATGATGGTTTGAAAGT 713
|||||.||.|||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 3808 GCCATCGGAGGAAAGGACAAAGGACGTCTCTTCCAAGGTCAACTCTCTGGGCTCTATTATGATGGTTTGAAAGT 3881
Query 714 ACTGAACATGGCGGCTGAGAACAACCCCAATATTAAAATCAATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCAT 787
||||||||||||.||||||||||||||.|||||||||||||||||||||||.|||||.||.|||||||||||||
Sbjct 3882 ACTGAACATGGCAGCTGAGAACAACCCTAATATTAAAATCAATGGAAGTGTCCGGCTAGTGGGAGAAGTCCCAT 3955
Query 788 CAATTTTGGGAACAACACAGACGACCTCCATGCCACCAGAAATGTCTACTACTGTCATGGAAACCACTACTACA 861
||.|.|..||||||||||||||.||.|||||||||||.|||||||||||.||.||||||||||||||.||.||.
Sbjct 3956 CAGTCTCAGGAACAACACAGACAACGTCCATGCCACCTGAAATGTCTACCACCGTCATGGAAACCACCACCACC 4029
Query 862 ATGGCGACTACCACAACCCGTAAGAATCGCTCTACAGCCAGCATTCAGCCAACATCAGATGATCTTGTTTCATC 935
|||||.||.|||||.|||||.|||||.|||||||||||||||||||||||.||.||||||||||||||||||||
Sbjct 4030 ATGGCTACGACCACCACCCGAAAGAACCGCTCTACAGCCAGCATTCAGCCCACGTCAGATGATCTTGTTTCATC 4103
Query 936 TGCTGAATGTTCAAGTGATGATGAAGACTTTGTTGAATGTGAGCCGAGTACAGGTAGGTCAGCAAACCCCACGG 1009
|||||||||||||||||||||||||||||||||.||||||||.||.|||| |||||||||||||||
Sbjct 4104 TGCTGAATGTTCAAGTGATGATGAAGACTTTGTCGAATGTGAACCAAGTA---------CAGCAAACCCCACGG 4168
Query 1010 AGCCGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTC 1083
||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||
Sbjct 4169 AGCCAGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCCAGCAGTACAACAGGGATGGTCGTC 4242
Query 1084 GGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGA 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4243 GGCATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGA 4316
Query 1158 GGGGTCCTATCAAGTGGACGAGACGCGGAACTACATCAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGG 1231
|||||||||||||||||||||||||.|||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 4317 GGGGTCCTATCAAGTGGACGAGACGAGGAACTACATCAGCAACTCGGCCCAGAGCAACGGCACGCTCATGAAGG 4390
Query 1232 AGAAGCAGCAG--AGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAAGGACAGGGAGCATTACGTG 1296
||||||| || |||||.|||||||||||.||||||||||||||||||||||.||||.||||.|||
Sbjct 4391 AGAAGCA--AGCCAGCTCCAAGAGCGGCCATAAGAAACAGAAAAACAAGGACAAGGAGTATTATGTG 4455
