Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07403
- Subject:
- XM_006515567.3
- Aligned Length:
- 1914
- Identities:
- 1189
- Gaps:
- 627
Alignment
Query 1 ATGCACCTGAGAATCCACGCGAGACGGAGCCCTCCTCGCCGGCCGGCCTGGACGCTTGGGATCTGGTTCCTGTT 74
||||||||||||||||||.|.||||||||||||||||||||||||||||||||||||||||||||||.|||.||
Sbjct 1 ATGCACCTGAGAATCCACCCAAGACGGAGCCCTCCTCGCCGGCCGGCCTGGACGCTTGGGATCTGGTCCCTCTT 74
Query 75 CTGGGGATGTATCGTCAGCTCTGTATGGAGTTCTTCTAATGTAGCTTCCTCCTCCTCCACCTCTTCCTCGCCGG 148
||||||||||||||||||||||||.||||||||||||||||||| ||||||||.||||||||||.||||
Sbjct 75 CTGGGGATGTATCGTCAGCTCTGTGTGGAGTTCTTCTAATGTAG------CCTCCTCCTCCTCTTCCTCTCCGG 142
Query 149 GGTCTCACTCTCAGCACGAGCACCATTTCCATGGCAGCAAGCATCACTCAGTGCCTATTTCTATCTATCGTTCC 222
|.||||||||||||||.||.|||||||||||.|||||||||||.|||||.||||||||||||||||||||.|||
Sbjct 143 GATCTCACTCTCAGCAGGAACACCATTTCCACGGCAGCAAGCACCACTCTGTGCCTATTTCTATCTATCGCTCC 216
Query 223 CCTGTTTCCCTTCGAGGAGGACACGCTGGCGCTACGTACATCTTTGGGAAAAGTGGTGGGCTTATCCTCTACAC 296
||||||||||||||||||||.||||||||.||.||.|||||||||||||||||.|||||.||.||||||||.||
Sbjct 217 CCTGTTTCCCTTCGAGGAGGGCACGCTGGTGCAACATACATCTTTGGGAAAAGCGGTGGCCTCATCCTCTATAC 290
Query 297 CTGGCCAGCCAATGACAGGCCCAGCACGCGGTCTGACCGCCTTGCCGTGGGCTTCAGCACCACTGTGAAGGATG 370
|||||||||.||||||||.||||||||.||.||||||||.||.|||||||||||||||||.|||||||||||||
Sbjct 291 CTGGCCAGCAAATGACAGACCCAGCACACGCTCTGACCGTCTCGCCGTGGGCTTCAGCACTACTGTGAAGGATG 364
Query 371 GCATCTTGGTCCGCATCGACAGTGCTCCAGGACTTGGTGACTTCCTCCAGCTTCACATAGAACAGGGGAAAATT 444
|.|||||.||.|||||.|||||.||.||.||||||||.||||||||||||||||||||||||||.|||||||||
Sbjct 365 GTATCTTAGTACGCATTGACAGCGCCCCTGGACTTGGCGACTTCCTCCAGCTTCACATAGAACAAGGGAAAATT 438
Query 445 GGAGTTGTCTTCAACATTGGCACAGTTGACATCTCCATCAAAGAGGAGAGAACCCCTGTAAATGACGGCAAATA 518
||||||||||||||.|||||||||||||||||||||||||||||.||||||||.|||||.|||||.||||||||
Sbjct 439 GGAGTTGTCTTCAATATTGGCACAGTTGACATCTCCATCAAAGAAGAGAGAACTCCTGTCAATGATGGCAAATA 512
Query 519 CCATGTGGTACGCTTCACCAGGAACGGCGGCAACGCCACCCTGCAGGTGGACAACTGGCCAGTGAATGAACATT 592
|||.||.||.||||||||||||||.||.||.||.||.||.||.||||||||||||||||||||||||||.||.|
Sbjct 513 CCACGTTGTGCGCTTCACCAGGAATGGGGGAAATGCTACACTTCAGGTGGACAACTGGCCAGTGAATGAGCACT 586
Query 593 ATCCTACAGGCCGGCAGTTAACCATCTTCAACACTCAGGCGCAAATAGCCATTGGTGGAAAGGACAAAGGACGC 666
|||||||||||||||||.||||||||||||||||.|||||||||||||||||.||.|||||||||||||||||.
Sbjct 587 ATCCTACAGGCCGGCAGCTAACCATCTTCAACACCCAGGCGCAAATAGCCATCGGAGGAAAGGACAAAGGACGT 660
Query 667 CTCTTCCAAGGCCAACTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGGCGGCTGAGAACAACCC 740
|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 661 CTCTTCCAAGGTCAACTCTCTGGGCTCTATTATGATGGTTTGAAAGTACTGAACATGGCAGCTGAGAACAACCC 734
Query 741 CAATATTAAAATCAATGGAAGTGTTCGGCTGGTTGGAGAAGTCCCATCAATTTTGGGAACAACACAGACGACCT 814
.|||||||||||||||||||||||.|||||.||.|||||||||||||||.|.|..||||||||||||||.||.|
Sbjct 735 TAATATTAAAATCAATGGAAGTGTCCGGCTAGTGGGAGAAGTCCCATCAGTCTCAGGAACAACACAGACAACGT 808
Query 815 CCATGCCACCAGAAATGTCTACTACTGTCATGGAAACCACTACTACAATGGCGACTACCACAACCCGTAAGAAT 888
||||||||||.|||||||||||.||.||||||||||||||.||.||.|||||.||.|||||.|||||.|||||.
Sbjct 809 CCATGCCACCTGAAATGTCTACCACCGTCATGGAAACCACCACCACCATGGCTACGACCACCACCCGAAAGAAC 882
Query 889 CGCTCTACAGCCAGCATTCAGCCAACATCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGA 962
|||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 CGCTCTACAGCCAGCATTCAGCCCACGTCAGATGATCTTGTTTCATCTGCTGAATGTTCAAGTGATGATGAAGA 956
Query 963 CTTTGTTGAATGTGAGCCGAGTACAGGTAGGT------------------------------------------ 994
||||||.||||||||.||.|||||||| ||||
Sbjct 957 CTTTGTCGAATGTGAACCAAGTACAGG-AGGTGAATTAGTTATTCCTCTTCTGGTAGAAGACCCTTTAGCTACC 1029
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1030 CCTCCTATTGCTACTCGTGTACCCTCCATTACACTCCCCCCTACCTTCCGCCCCCTCCTCACCATTATTGAGAC 1103
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1104 CACCAAAGATTCCCTGTCCATGACCTCTGAGGCGGGGTTACCTTGCTTGTCGGACCAAGGCAGCGATGGTTGTG 1177
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1178 ATGATGATGGCTTGGTGATATCTGGGTATGGCTCAGGGGAAACCTTTGACTCTAACCTGCCCCCTACTGATGAT 1251
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1252 GAAGATTTTTACACCACCTTCTCCTTGGTAACAGATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAA 1325
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1326 AGCACATGCGCCCAAGTGGGAATCCAAGGACTTTAGACCTAACAAAGTCTCGGAAACTAGTAGAACTACAACCA 1399
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1400 CCTCTTTGTCCCCTGAGCTGATCCGCTTCACAGCGTCCTCCTCGTCTGGGATGGTGCCCAAATTGCCAGCTGGC 1473
Query 995 -------------------------------------------------------------------------- 994
Sbjct 1474 AAAATGAATAACCGTGATCTCAAACCCCAGCCTGATATAGTCTTGCTTCCGTTGCCCACTGCCTATGAGCTAGA 1547
Query 995 --------------------------------------------------------CAGCAAACCCCACGGAGC 1012
||||||||||||||||||
Sbjct 1548 CAGCACCAAACTGAAGAGCCCACTAATTACTTCCCCCATGTTCCGTAATGTGCCCACAGCAAACCCCACGGAGC 1621
Query 1013 CGGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCGAGCAGCACAACAGGGATGGTCGTCGGC 1086
|.||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||
Sbjct 1622 CAGGAATCAGACGGGTTCCGGGGGCCTCAGAGGTGATCCGGGAGTCCAGCAGTACAACAGGGATGGTCGTCGGC 1695
Query 1087 ATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGG 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1696 ATTGTGGCTGCTGCCGCCCTCTGCATCTTGATCCTCCTGTACGCCATGTACAAGTACAGGAACAGGGACGAGGG 1769
Query 1161 GTCCTATCAAGTGGACGAGACGCGGAACTACATCAGCAACTCCGCCCAGAGCAACGGCACGCTCATGAAGGAGA 1234
||||||||||||||||||||||.|||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 1770 GTCCTATCAAGTGGACGAGACGAGGAACTACATCAGCAACTCGGCCCAGAGCAACGGCACGCTCATGAAGGAGA 1843
Query 1235 AGCAGCAG--AGCTCGAAGAGCGGCCACAAGAAACAGAAAAACAAGGACAGGGAGCATTACGTG 1296
|||| || |||||.|||||||||||.||||||||||||||||||||||.||||.||||.|||
Sbjct 1844 AGCA--AGCCAGCTCCAAGAGCGGCCATAAGAAACAGAAAAACAAGGACAAGGAGTATTATGTG 1905
