Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07469
Subject:
XM_006539308.3
Aligned Length:
3579
Identities:
2622
Gaps:
747

Alignment

Query    1  ATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCA  74

Query   75  CCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAAC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct   75  CCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAGC  148

Query  149  CAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGT  222
            ||||||||||||||||||||||||||||.||.|||||||||||||||||||||||.||||||||||||||||||
Sbjct  149  CAGCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCCGT  222

Query  223  TCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGG  296

Query  297  AGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGGTGCGTT  370
            .||||||||||||||||.|||||||||||||||||||||.|||||||||||||||||||||||.|||||.||.|
Sbjct  297  TGGAGGCGGCTATAATACTAGCAAACATCGATGGCCTACAGGGGATAACATTCATGCAGAACACCAGGTACGCT  370

Query  371  CCATGGATGAACTGAATCATGATTTTCAAGCACTTGCTCTGGAGGGAAGAGCGATGGGAGAGCAGCTCTTGCCA  444
            |.|||||||||.|||||||||||||||||||||||||||||||.||.|||||.|||||.|              
Sbjct  371  CTATGGATGAATTGAATCATGATTTTCAAGCACTTGCTCTGGAAGGGAGAGCTATGGGCG--------------  430

Query  445  GGTAAAAAGTTTTGGGAAACAGATGAATCCAGCAAAGATGGACCAAAAGGAATATTCCTGGGTGATCAATGGCG  518
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  519  AGACAGTGCCTGGGGAACATCAGATCATTCAGTTTCCCAGCCAATCATGGTGCAGAGAAGACCTGGTCAGAGTT  592
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  593  TCCATGTGAACAGTGAGGTCAATTCTGTACTGTCCCCACGATCGGAGAGTGGGGGACTAGGCGTTAGCATGGTG  666
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  667  GAGTATGTGTTGAGCTCATCCCCGGGCGATTCCTGTCTAAGAAAAGGAGGATTTGGCCCAAGGGATGCAGACAG  740
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  741  TGATGAAAACGACAAAGGTGAAAAGAAGAACAAGGGTACGTTTGATGGAGATAAGCTAGGAGATTTGAAGGAGG  814
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  815  AGGGTGATGTGATGGACAAGACCAATGGTTTACCAGTGCAGAATGGGATTGATGCAGACGTCAAAGATTTTAGC  888
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  889  CGTACCCCTGGTAATTGCCAGAACTCTGCTAATGAAGTGGATCTTCTGGGTCCAAACCAGAATGGTTCTGAGGG  962
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  963  CTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAGTGTCC  1036
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query 1037  CCTTGGACCCCATGGAACATGTGGGCATGGAGCCTCTTCAGTTTGATTATTCAGGCACGCAGGTACCTGTGGAC  1110
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query 1111  TCAGCAGCAGCAACTGTGGGACTTTTTGACTACAATTCTCAACAACAGCTGTTCCAAAGACCTAATGCGCTTGC  1184
                                                          ||||.|||||||||||.|||||.|||||
Sbjct  431  ----------------------------------------------AGCTATTCCAAAGACCCAATGCACTTGC  458

Query 1185  TGTCCAGCAGTTGACAGCTGCTCAGCAGCAGCAGTATGCACTGGCAGCTGCTCATCAGCCGCACATC-------  1251
            |||.|||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||.||||||       
Sbjct  459  TGTTCAGCAGTTGACAGCTGCCCAGCAGCAGCAGTATGCACTTGCAGCAGCCCACCAGCCTCACATCGGTATGT  532

Query 1252  --------GGTTTAGCTCCCGCTGCGTTTGTCCCCAATCCATACATCATCAGCGCTGCTCCCCCAGGGACGGAC  1317
                    |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct  533  TTCCAGCAGGTTTAGCTCCCGCTGCGTTTGTCCCCAACCCATACATCATCAGCGCTGCTCCCCCAGGGACGGAC  606

Query 1318  CCCTACACAGCTGGATTGGCTGCAGCAGCGACACTAGGCCCAGCTGTGGTCCCTCACCAGTATTATGGAGTTAC  1391
            |||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||.||
Sbjct  607  CCCTACACAGCTGGATTGGCTGCAGCAGCGACACTCGGCCCAGCTGTGGTCCCTCACCAATATTATGGAGTCAC  680

Query 1392  TCCCTGGGGAGTCTACCCTGCCAGTCTTTTCCAGCAGCAAGCTGCCGCTGCCGCTGCAGCAACTAATTCAGCTA  1465
            .||.|||||.|||||||||||||||||.|||||||||||.||.||.||.||.||.|||||.||.||.||.||||
Sbjct  681  GCCATGGGGTGTCTACCCTGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGCTGCAGCAGCTACAAACTCTGCTA  754

Query 1466  ATCAACAGACCACCCCACAGGCTCAGCAAGGACAGCAGCAGGTTCTCCGTGGAGGAGCCAGCCAACGTCCTTTG  1539
            .|||.||||.|.|.||.|||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||||
Sbjct  755  CTCAGCAGAGCGCTCCGCAGGCCCAGCAGGGACAGCAGCAGGTTCTTCGTGGAGGAGCTAGCCAACGTCCTTTG  828

Query 1540  ACCCCAAACCAGAACCAGCAGGGACAGCAAACGGATCCCCTTGTGGCAGCTGCAGCAGTGAATTCTGCCCTTGC  1613
            ||||||||.|||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||.|||||
Sbjct  829  ACCCCAAATCAGAACCAGCAGGGACAACAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTTGC  902

Query 1614  ATTTGGACAAGGTCTGGCAGCAGGCATGCCAGGTTATCCGGTGTTGGCTCCTGCTGCTTACTATGACCAAACTG  1687
            .|||||||||||..||||.|||||.||||||||||||||.||.|||||.|||||||||||||||||||||||||
Sbjct  903  CTTTGGACAAGGATTGGCTGCAGGTATGCCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTATGACCAAACTG  976

Query 1688  GTGCCCTTGTAGTGAATGCAGGCGCGAGAAATGGTCTTGGAGCTCCTGTTCGACTTGTAGCTCCTGCCCCAGTC  1761
            ||||||||||.|||||||||||.||.||||||||.||.||||||||.||.||.|||||.|||||.|||||||||
Sbjct  977  GTGCCCTTGTGGTGAATGCAGGGGCAAGAAATGGCCTCGGAGCTCCAGTCCGGCTTGTTGCTCCAGCCCCAGTC  1050

Query 1762  ATCATTAGTTCCTCAGCTGCACAAGCAGCTGTTGCAGCAGCCGCAGCTTCAGCAAATGGAGCAGCTGGTGGTCT  1835
            ||||||||.|||||||||||||||||||||||||||||.||.|||||.||||||||.|||||||||||||||||
Sbjct 1051  ATCATTAGCTCCTCAGCTGCACAAGCAGCTGTTGCAGCGGCTGCAGCGTCAGCAAACGGAGCAGCTGGTGGTCT  1124

Query 1836  TGCTGGAACAACAAATGGACCATTTCGCCCTTTAGGAACACAGCAGCCTCAGCCCCAGCCCCAGCAGCAGCCCA  1909
            |||.|||||.|||||||||||||||||.||||||||.||.||||||||.|||||||||||.|||||||||||||
Sbjct 1125  TGCCGGAACTACAAATGGACCATTTCGACCTTTAGGCACCCAGCAGCCCCAGCCCCAGCCTCAGCAGCAGCCCA  1198

Query 1910  ATAACAACCTGGCATCCAGTTCTTTCTACGGCAACAACTCTCTGAACAGCAATTCACAGAGCAGCTCCCTCTTC  1983
            .||||||.|||||.|||||.||||||||.||||||||||||||||.|||.||.||.||||||||||||||||||
Sbjct 1199  GTAACAATCTGGCTTCCAGCTCTTTCTATGGCAACAACTCTCTGAGCAGTAACTCCCAGAGCAGCTCCCTCTTC  1272

Query 1984  TCCCAGGGCTCTGCCCAGCCTGCCAACACATCCTTGGGATTCGGAAGTAGCAGTTCTCTCGGCGCCACCCTGGG  2057
            ||.|||||||||||.||||||||||||||.|||||||||||||||||.||||||||.||.||.|||||||||||
Sbjct 1273  TCTCAGGGCTCTGCACAGCCTGCCAACACGTCCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCACCCTGGG  1346

Query 2058  ATCCGCCCTTGGAGGGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGA  2131
            |||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1347  ATCGGCCCTTGGAGGGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGA  1420

Query 2132  CTGGCAGCAGTGACCTTTATAAGAGGACATCGAGCAGCTTGACCCCCATTGGACACAGTTTTTATAACGGCCTT  2205
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||.|.|||||
Sbjct 1421  CTGGCAGCAGTGACCTTTATAAGAGGACATCGAGCAGCTTGGCCCCCATTGGACACAGTTTTTATAGCAGCCTT  1494

Query 2206  AGCTTTTCCTCCTCTCCTGGACCCGTGGGCATGCCTCTCCCTAGTCAGGGACCAGGACATTCACAGACACCACC  2279
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1495  AGCTATTCCTCCTCTCCTGGACCCGTGGGCATGCCTCTCCCTAGTCAGGGACCAGGACATTCACAGACACCACC  1568

Query 2280  TCCTTCCCTCTCTTCACATGGATCCTCTTCAAGCTTAAACCTGGGAGGACTCACGAACGGCAGTGGAAGATACA  2353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1569  TCCTTCCCTCTCTTCACATGGATCCTCTTCAAGCTTAAACCTGGGAGGACTCACAAACGGCAGTGGAAGATACA  1642

Query 2354  TCTCTGCTGCTCCAGGCGCTGAAGCCAAGTACCGCAGTGCAAGCAGCGCCTCCAGCCTCTTCAGCCCGAGCAGC  2427
            |||||||||||||.||.||.||||||||||||||||||||||||||.|||||||||||.||||||||.||||||
Sbjct 1643  TCTCTGCTGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCCTTTTCAGCCCCAGCAGC  1716

Query 2428  ACTCTTTTCTCTTCCTCTCGTTTGCGATATGGAATGTCTGATGTCATGCCTTCTGGCAGGAGCAGGCTTTTGGA  2501
            ||.|||||.|||||||||||||||||||||||||||||||||||.|||||.||||||||||||||.|||.||||
Sbjct 1717  ACCCTTTTTTCTTCCTCTCGTTTGCGATATGGAATGTCTGATGTTATGCCCTCTGGCAGGAGCAGACTTCTGGA  1790

Query 2502  AGATTTTCGAAACAACCGGTACCCCAATTTACAACTGCGGGAGATTGCTGGACATATAATGGAATTTTCCCAAG  2575
            ||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||.||||
Sbjct 1791  AGATTTTCGAAACAACCGGTACCCTAATTTACAACTGCGGGAGATTGCTGGGCATATAATGGAATTTTCTCAAG  1864

Query 2576  ACCAGCATGGGTCCAGATTCATTCAGCTGAAACTGGAGCGTGCCACACCAGCTGAGCGCCAGCTTGTCTTCAAT  2649
            ||||||||||.||.||||||||||||||||||||.||||||||||||.||||||||||||||||||||||||||
Sbjct 1865  ACCAGCATGGCTCTAGATTCATTCAGCTGAAACTAGAGCGTGCCACAGCAGCTGAGCGCCAGCTTGTCTTCAAT  1938

Query 2650  GAAATCCTCCAGGCTGCCTACCAACTCATGGTGGATGTGTTTGGTAATTACGTCATTCAGAAGTTCTTTGAATT  2723
            |||||||||||||||||.||||||||.|||||||||||||||||.||||||||||||||||||||.||||||||
Sbjct 1939  GAAATCCTCCAGGCTGCGTACCAACTTATGGTGGATGTGTTTGGAAATTACGTCATTCAGAAGTTTTTTGAATT  2012

Query 2724  TGGCAGTCTTGAACAGAAGCTGGCTTTGGCAGAACGGATTCGAGGCCACGTCCTGTCATTGGCACTACAGATGT  2797
            ||||||||.||||||||||||||||.||||.|||||||||||||||||.|||||.|||||||||||.|||||||
Sbjct 2013  TGGCAGTCATGAACAGAAGCTGGCTCTGGCTGAACGGATTCGAGGCCATGTCCTATCATTGGCACTGCAGATGT  2086

Query 2798  ATGGCTGCCGTGTTATCCAGAAAGCTCTTGAGTTTATTCCTTCAGACCAGCAG------AATGAGATGGTTCGG  2865
            |.||||||||.||.||||||||||||.|.|||||||||||.||||||||||||      ||.||||||||.|||
Sbjct 2087  ACGGCTGCCGAGTCATCCAGAAAGCTTTGGAGTTTATTCCCTCAGACCAGCAGGTAATTAACGAGATGGTGCGG  2160

Query 2866  GAACTAGATGGCCATGTCTTGAAGTGTGTGAAAGATCAGAATGGCAATCACGTGGTTCAGAAATGCATTGAATG  2939
            ||.|||||||||||||||.||||||||||||||||.|||||.|||||.||.|||||||||||.||||||||.||
Sbjct 2161  GAGCTAGATGGCCATGTCCTGAAGTGTGTGAAAGACCAGAACGGCAACCATGTGGTTCAGAAGTGCATTGAGTG  2234

Query 2940  TGTACAGCCCCAGTCTTTGCAATTTATCATCGATGCGTTTAAGGGACAGGTATTTGCCTTATCCACACATCCTT  3013
            |||||||||||||||||||||.||||||||||||||.||.|||||.|||||.|||||.||.||.||.||.||.|
Sbjct 2235  TGTACAGCCCCAGTCTTTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGCTTTGTCTACGCACCCGT  2308

Query 3014  ATGGCTGCCGAGTGATTCAGAGAATCCTGGAGCACTGTCTCCCTGACCAGACACTCCCTATTTTAGAGGAGCTT  3087
            |.|||||..|.|||||.|||||.|||||.|||||||||||||||||||||||.|||||.||..|.|||||||||
Sbjct 2309  ACGGCTGTAGGGTGATCCAGAGGATCCTAGAGCACTGTCTCCCTGACCAGACCCTCCCCATCCTGGAGGAGCTT  2382

Query 3088  CACCAGCACACAGAGCAGCTTGTACAGGATCAATATGGAAATTATGTAATCCAACATGTACTGGAGCACGGTCG  3161
            |||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||.|||||
Sbjct 2383  CACCAGCACACAGAGCAGCTTGTGCAGGATCAGTATGGAAATTATGTAATCCAACATGTACTGGAGCATGGTCG  2456

Query 3162  TCCTGAGGATAAAAGCAAAATTGTAGCAGAAATCCGAGGCAATGTACTTGTATTGAGTCAGCACAAATTTGCAA  3235
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||
Sbjct 2457  TCCTGAGGATAAAAGCAAAATTGTAGCAGAGATCCGAGGCAATGTACTTGTATTGAGTCAGCACAAGTTTGCAA  2530

Query 3236  GCAATGTTGTGGAGAAGTGTGTTACTCACGCCTCACGTACGGAGCGCGCTGTGCTCATCGATGAGGTGTGCACC  3309
            ||||||||||||||||||||||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||
Sbjct 2531  GCAATGTTGTGGAGAAGTGTGTTACTCACGCCTCACGTACAGAGCGTGCTGTGCTCATTGATGAGGTGTGCACC  2604

Query 3310  ATGAACGACGGTCCCCACAGTGCCTTATACACCATGATGAAGGACCAGTATGCCAACTACGTGGTCCAGAAGAT  3383
            ||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||.||||||||||||||
Sbjct 2605  ATGAACGACGGTCCCCACAGTGCCTTATACACCATGATGAAGGATCAGTATGCTAACTATGTGGTCCAGAAGAT  2678

Query 3384  GATTGACGTGGCGGAGCCAGGCCAGCGGAAGATCGTCATGCATAAGATCCGGCCCCACATCGCAACTCTTCGTA  3457
            |||.||.|||||.|||||.||.|||||||||||.||||||||.|||||||||||.|||||.||.||.|||||.|
Sbjct 2679  GATCGATGTGGCTGAGCCGGGTCAGCGGAAGATTGTCATGCACAAGATCCGGCCACACATTGCGACGCTTCGAA  2752

Query 3458  AGTACACCTATGGCAAGCACATTCTGGCCAAGCTGGAGAAGTACTACATGAAGAACGGTGTTGACTTAGGGCCC  3531
            ||||||||||||||||||||||.|||||||||||.||||||||||||||||||||.||.||.|||||.||||||
Sbjct 2753  AGTACACCTATGGCAAGCACATCCTGGCCAAGCTCGAGAAGTACTACATGAAGAATGGCGTGGACTTGGGGCCC  2826

Query 3532  ATCTGTGGCCCCCCTAATGGTATCATC  3558
            ||.|||||.||||||||||||||||||
Sbjct 2827  ATTTGTGGTCCCCCTAATGGTATCATC  2853

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