Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_07481
• Subject: XM_006715275.2
• Aligned Length: 3156
• Identities: 1772
• Gaps: 1383

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGTGTTACCTTCGCGATTACACTGGATCAGAAACAGGCCATGGAGGGACAGGATCCGGAGGCGCCAGCTCAA  74

Query    1  ----------------------------ATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGA  46
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCGACTACCGACCAGACTCCCGGAAATCATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGA  148

Query   47  TCATTAGAAGCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAACTCCTTCATTGAA  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCATTAGAAGCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAACTCCTTCATTGAA  222

Query  121  AATTCCTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAAAATGCACAATTTAGGCCACAAAAACAACAATCC  194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AATTCCTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAAAATGCACAATTTAGGCCACAAAAACAACAATCC  296

Query  195  CCCCAAAGAGCCTCAGCCTAAAAGGGTGGAAGAAGTCTACAGGGCCTTGAAAAATGGACTTGATGAATATCTGG  268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCCCAAAGAGCCTCAGCCTAAAAGGGTGGAAGAAGTCTACAGGGCCTTGAAAAATGGACTTGATGAATATCTGG  370

Query  269  AGGTTCACCAGACGGAGCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAAAAGAAACTCTCGCCTGGGTGTA  342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGTTCACCAGACGGAGCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAAAAGAAACTCTCGCCTGGGTGTA  444

Query  343  CTGTATGACCTAGACAAGCAAATTAAAACAATTGAAAGATACATGAGACGCCTGGAGTTTCATATAAGTAAGGT  416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGTATGACCTAGACAAGCAAATTAAAACAATTGAAAGATACATGAGACGCCTGGAGTTTCATATAAGTAAGGT  518

Query  417  AGATGAACTCTATGAAGCTTATTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCG  490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGATGAACTCTATGAAGCTTATTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCG  592

Query  491  CAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGAGTACACAGAG  564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGAGTACACAGAG  666

Query  565  AATATGTGCACCATTGAAGTGGAGCTAGAGAATCTGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGCTGG  638
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AATATGTGCACCATTGAAGTGGAGCTAGAGAATCTGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGCTGG  740

Query  639  CTTTGCACGCCTCTGTCCTGGAGATCAATATGAAATTTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAAAG  712
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTTTGCACGCCTCTGTCCTGGAGATCAATATGAAATTTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAAAG  814

Query  713  GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGAAGAAACAGTTTTTCTGCCCCTGATAGTTGGGTTC  786
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGAAGAAACAGTTTTTCTGCCCCTGATAGTTGGGTTC  888

Query  787  ATCTCCATCAAGGTCACGGAGCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAA  860
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ATCTCCATCAAGGTCACGGAGCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAA  962

Query  861  AGAGCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGACATCAATGACCTTGGTACCATCAAACTGAACCTGG  934
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGAGCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGACATCAATGACCTTGGTACCATCAAACTGAACCTGG  1036

Query  935  AAATCACCTGGTATCCATTTGACGTGGAGGACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTT  1008
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AAATCACCTGGTATCCATTTGACGTGGAGGACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTT  1110

Query 1009  CAGAGGAGAATGTCCATGTACAGCCAGGGTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA  1082
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CAGAGGAGAATGTCCATGTACAGCCAGGGTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA  1184

Query 1083  TCTACCTGATGACATCTTTGAAAATGGAAAGGCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTCAGTGACC  1156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCTACCTGATGACATCTTTGAAAATGGAAAGGCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTCAGTGACC  1258

Query 1157  TGCCCAACGGGGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATTACC  1230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGCCCAACGGGGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATTACC  1332

Query 1231  ATCACCCCTGCGGAGTTTAACCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGATGACACCAGCTCAGCATC  1304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ATCACCCCTGCGGAGTTTAACCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGATGACACCAGCTCAGCATC  1406

Query 1305  TTCCAGGAACTCCCTGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAA  1378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TTCCAGGAACTCCCTGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAA  1480

Query 1379  AACCTGCCTCGGCCCCATCTGAGGCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAG  1452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AACCTGCCTCGGCCCCATCTGAGGCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAG  1554

Query 1453  AATGATGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACACTTC  1526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AATGATGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACACTTC  1628

Query 1527  GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCCACAGACAGGCTGC  1600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCCACAGACAGGCTGC  1702

Query 1601  TCTCTGAGGGTTCTGTTGGTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATGGAAGCTTAGAGGATGCTTTT  1674
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TCTCTGAGGGTTCTGTTGGTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATGGAAGCTTAGAGGATGCTTTT  1776

Query 1675  AATGGGCTTTTACTTGCATTAGAACCACATAAAGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGAAGTCAT  1748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AATGGGCTTTTACTTGCATTAGAACCACATAAAGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGAAGTCAT  1850

Query 1749  GAATTTGGANGATATTCTAAAA---AAG----------------------------------------------  1773
            |||||||||.||||||||||||   |||                                              
Sbjct 1851  GAATTTGGATGATATTCTAAAATGCAAGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTTTAAGTCTCACAGTTG  1924

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 1925  AAAGTGCTTTAGAAAGCTTTGATTTCCTGAACACCTCTGATTTTGACGAGGAGGAGGATGGTGATGAGGTTTGT  1998

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 1999  AATGTTGGCGGAGGTGCTGACTCAGTATTTTCAGACACTGAGACTGAGAAACACAGTTACAGGTCGGTTCACCC  2072

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2073  AGAAGCCAGGGGGCATCTCAGTGAAGCGCTCACTGAAGACACAGGAGTTGGGACCAGTGTGGCAGGAAGTCCTC  2146

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2147  TCCCACTGACCACAGGCAACGAGAGCCTGGACATCACCATCGTCAGGCACCTCCAGTACTGCACCCAACTCGTG  2220

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2221  CAGCAAATTGTTTTCTCAAGCAAAACCCCATTTGTGGCAAGAAGTCTCTTAGAGAAGCTTTCTAGGCAGATCCA  2294

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2295  AGTGATGGAGAAACTCGCAGCTGTCAGTGATGAGAACATAGGAAATATCAGTTCTGTTGTGGAAGCCATACCAG  2368

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2369  AATTTCACAAAAAGCTGTCTTTGCTGTCATTCTGGACCAAGTGCTGCAGCCCTGTTGGTGTCTACCACAGCCCA  2442

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2443  GCGGACAGAGTGATGAAGCAGCTGGAGGCCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCAGA  2516

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2517  CCCAGTGTTTCGAACCCTGGTGTCCCAAATTCTGGACCGGGCTGAGCCTCTGCTTTCCTCCAGCCTGTCCTCGG  2590

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2591  AAGTCGTCACTGTTTTCCAGTATTACAGTTACTTCACCAGCCACGGCGTCAGTGACCTGGAGAGTTACCTGAGC  2664

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2665  CAGCTGGCCAGGCAAGTTTCCATGGTTCAGACTCTGCAATCACTAAGAGATGAAAAACTGCTACAAACCATGAG  2738

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2739  TGACCTTGCTCCCAGCAACCTCCTGGCCCAGCAGGAAGTACTCAGGACTCTGGCTCTGCTATTAACCAGAGAGG  2812

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2813  ACAACGAAGTTAGTGAGGCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAATCAGCATTTCAGGGAAAAGGCC  2886

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2887  TTGCTCTATTACTGTGAAGCACTAACAAAGACAAACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTGAAAAT  2960

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2961  CCTTGAGGCTACTGAAAGCATTAAAATGCTGGTGACATTGTGTCAATCTGATACTGAAGAAATCAGAAATGTGG  3034

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 3035  CCTCAGAAACCCTCTTGTCTCTGGGAGAAGATGGGCGGCTGGCATATGAACAATTGGACAAATTTCCTCGAGAC  3108

Query 1774  ------------------------------------------------  1773
                                                            
Sbjct 3109  TGTGTTAAAGTCGGAGGTCGTCATGGAACTGAAGTTGCCACAGCCTTT  3156