Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07496
Subject:
NM_130442.3
Aligned Length:
2181
Identities:
741
Gaps:
1440

Alignment

Query    1  ATGCCGCCACCCGCGGACATCGTCAAGGTGGCCATAGAATGGCCGGGCGCCTACCCCAAACTCATGGAAATTGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TCAGAAAAAACCACTGTCTGCAATAATAAAGGAAGTCTGTGATGGGTGGTCTCTTGCCAACCATGAATATTTTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CACTCCAGCATGCCGATAGTTCAAACTTCTATATCACAGAAAAGAACCGCAATGAGATAAAAAATGGCACTATC  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CTTCGATTAACCACATCTCCAGCTCAGAACGCCCAGCAGCTCCATGAACGAATCCAGTCCTCGAGTATGGATGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAAGCTGGAAGCCCTGAAGGACTTGGCCAGCCTCTCCCGGGATGTCACGTTTGCCCAGGAGTTTATAAACCTGG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ACGGTATCTCTCTCCTCACGCAGATGGTAGAGAGCGGCACTGAGCGATACCAGAAATTGCAGAAGATCATGAAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CCTTGCTTTGGAGACATGCTGTCCTTCACCCTGACGGCCTTCGTTGAGCTGATGGACCATGGCATAGTGTCCTG  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  GGATACATTTTCGGTGGCGTTCATTAAGAAGATAGCAAGTTTTGTGAACAAGTCAGCCATAGACATCTCGATCC  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  TGCAGCGGTCCTTGGCCATTTTGGAGTCGATGGTGCTCAATAGCCATGACCTCTACCAGAAAGTGGCGCAGGAG  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  ATCACCATCGGCCAGCTCATTCCACACCTGCAAGGGTCAGATCAAGAAATCCAAACCTATACTATTGCAGTGAT  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  TAATGCGCTTTTCCTGAAGGCTCCTGATGAGAGGAGGCAGGAGATGGCGAATATTTTGGCTCAGAAGCAACTGC  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  GTTCCATCATTTTAACACATGTCATCCGAGCCCAGCGGGCCATCAACAATGAGATGGCGCACCAGCTGTATGTT  888
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  889  CTACAAGTGCTCACCTTTAACCTCCTGGAAGACAGGATGATGACCAAAATGGACCCCCAGGACCAGGCTCAGAG  962
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  963  GGACATCATATTTGAACTTCGAAGAATTGCTTTTGATGCTGAGTCTGAACCTAACAACAGCAGTGGCAGCATGG  1036
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1037  AGAAACGCAAGTCCATGTACACGCGAGATTATAAGAAGCTTGGGTTCATTAATCATGTCAACCCTGCCATGGAC  1110
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1111  TTCACGCAGACTCCACCTGGGATGTTGGCTCTGGACAACATGCTGTACTTTGCCAAGCACCACCAAGATGCCTA  1184
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1185  CATCCGGATTGTGCTTGAGAACAGTAGTCGAGAAGACAAGCATGAATGTCCCTTTGGCCGCAGTAGTATAGAGC  1258
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1259  TGACCAAGATGCTATGTGAGATCTTGAAAGTGGGCGAGTTGCCTAGTGAGACCTGCAACGACTTCCACCCGATG  1332
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1333  TTCTTCACCCACGACAGATCCTTTGAGGAGTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGACATGGAAGGA  1406
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query 1407  AATGAGGGCAACTTCTGAAGACTTCAACAAGGTAATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACTTACAA  1480
                                              ||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ----------------------------------ATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACTTACAA  40

Query 1481  CCAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACTGCAGAACCTGAGCTACACTGAGATCCTGAAAATCCGC  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   41  CCAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACTGCAGAACCTGAGCTACACTGAGATCCTGAAAATCCGC  114

Query 1555  CAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGCCCGATTTTGGAACTAAAGGAGAAGATTCAGCCAGA  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  115  CAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGCCCGATTTTGGAACTAAAGGAGAAGATTCAGCCAGA  188

Query 1629  AATCTTAGAGCTGATCAAACAGCAACGCCTGAACCGCCTTGTGGAAGGGACCTGCTTTAGGAAACTCAATGCCC  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  189  AATCTTAGAGCTGATCAAACAGCAACGCCTGAACCGCCTTGTGGAAGGGACCTGCTTTAGGAAACTCAATGCCC  262

Query 1703  GGCGGAGGCAAGACAAGTTTTGGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGCATTACGGAGACTTAGAA  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  263  GGCGGAGGCAAGACAAGTTTTGGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGCATTACGGAGACTTAGAA  336

Query 1777  GAGAGTCCTCAGGGAGAAGTGCCCCACGATTCCTTGCAGGACAAACTGCCGGTGGCAGATATCAAAGCCGTGGT  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  337  GAGAGTCCTCAGGGAGAAGTGCCCCACGATTCCTTGCAGGACAAACTGCCGGTGGCAGATATCAAAGCCGTGGT  410

Query 1851  GACGGGAAAGGACTGCCCTCATATGAAAGAGAAAGGTGCCCTTAAACAAAACAAGGAGGTGCTTGAACTCGCTT  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  411  GACGGGAAAGGACTGCCCTCATATGAAAGAGAAAGGTGCCCTTAAACAAAACAAGGAGGTGCTTGAACTCGCTT  484

Query 1925  TCTCCATCTTGTATGACTCAAACTGCCAACTGAACTTCATCGCTCCTGACAAGCATGAGTACTGTATCTGGACG  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  485  TCTCCATCTTGTATGACTCAAACTGCCAACTGAACTTCATCGCTCCTGACAAGCATGAGTACTGTATCTGGACG  558

Query 1999  GATGGACTGAATGCGCTACTCGGGAAGGACATGATGAGCGACCTGACGCGGAATGACCTGGACACCCTGCTCAG  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  559  GATGGACTGAATGCGCTACTCGGGAAGGACATGATGAGCGACCTGACGCGGAATGACCTGGACACCCTGCTCAG  632

Query 2073  CATGGAAATCAAGCTCCGCCTCCTGGACCTGGAAAACATCCAGATCCCTGACGCACCTCCGCCGATTCCCAAGG  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  633  CATGGAAATCAAGCTCCGCCTCCTGGACCTGGAAAACATCCAGATCCCTGACGCACCTCCGCCGATTCCCAAGG  706

Query 2147  AGCCCAGCAACTATGACTTCGTCTATGACTGTAAC  2181
            |||||||||||||||||||||||||||||||||||
Sbjct  707  AGCCCAGCAACTATGACTTCGTCTATGACTGTAAC  741

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