Construct: ORF ccsbBroadEn_07496

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010229.1_s300c1, BRDN0000394842
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ELMO1 (9844)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9844 ELMO1 engulfment and cell motility 1 NM_001206480.2 99.9% 100% 399G>A
2 human 9844 ELMO1 engulfment and cell motility 1 NM_001206482.1 99.9% 100% 399G>A
3 human 9844 ELMO1 engulfment and cell motility 1 NM_014800.10 99.9% 100% 399G>A
4 human 9844 ELMO1 engulfment and cell motility 1 XM_005249919.3 99.9% 100% 399G>A
5 human 9844 ELMO1 engulfment and cell motility 1 XM_006715805.1 99.9% 100% 399G>A
6 human 9844 ELMO1 engulfment and cell motility 1 XM_011515654.2 99.9% 100% 399G>A
7 human 9844 ELMO1 engulfment and cell motility 1 XM_017012839.1 99.9% 100% 399G>A
8 human 9844 ELMO1 engulfment and cell motility 1 XM_024447008.1 99.9% 100% 399G>A
9 human 9844 ELMO1 engulfment and cell motility 1 XR_001744894.2 55.5% (many diffs)
10 human 9844 ELMO1 engulfment and cell motility 1 NM_001039459.2 33.9% 33.9% 0_1ins1440
11 human 9844 ELMO1 engulfment and cell motility 1 NM_130442.3 33.9% 33.9% 0_1ins1440
12 mouse 140580 Elmo1 engulfment and cell motility 1 NM_080288.2 90.8% 99.5% (many diffs)
13 mouse 140580 Elmo1 engulfment and cell motility 1 XM_006516547.3 90.8% 99.5% (many diffs)
14 mouse 140580 Elmo1 engulfment and cell motility 1 XM_006516544.3 89% 97.5% (many diffs)
15 mouse 140580 Elmo1 engulfment and cell motility 1 XM_006516545.3 89% 97.5% (many diffs)
16 mouse 140580 Elmo1 engulfment and cell motility 1 XM_006516546.3 89% 97.5% (many diffs)
17 mouse 140580 Elmo1 engulfment and cell motility 1 XM_017315380.1 78.7% 86.5% (many diffs)
18 mouse 140580 Elmo1 engulfment and cell motility 1 NM_198093.3 31.5% 33.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2250
ORF length:
2181
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCCGCCACCC GCGGACATCG TCAAGGTGGC CATAGAATGG CCGGGCGCCT
121ACCCCAAACT CATGGAAATT GATCAGAAAA AACCACTGTC TGCAATAATA AAGGAAGTCT
181GTGATGGGTG GTCTCTTGCC AACCATGAAT ATTTTGCACT CCAGCATGCC GATAGTTCAA
241ACTTCTATAT CACAGAAAAG AACCGCAATG AGATAAAAAA TGGCACTATC CTTCGATTAA
301CCACATCTCC AGCTCAGAAC GCCCAGCAGC TCCATGAACG AATCCAGTCC TCGAGTATGG
361ATGCCAAGCT GGAAGCCCTG AAGGACTTGG CCAGCCTCTC CCGGGATGTC ACGTTTGCCC
421AGGAGTTTAT AAACCTGGAC GGTATCTCTC TCCTCACGCA GATGGTAGAG AGCGGCACTG
481AGCGATACCA GAAATTGCAG AAGATCATGA AGCCTTGCTT TGGAGACATG CTGTCCTTCA
541CCCTGACGGC CTTCGTTGAG CTGATGGACC ATGGCATAGT GTCCTGGGAT ACATTTTCGG
601TGGCGTTCAT TAAGAAGATA GCAAGTTTTG TGAACAAGTC AGCCATAGAC ATCTCGATCC
661TGCAGCGGTC CTTGGCCATT TTGGAGTCGA TGGTGCTCAA TAGCCATGAC CTCTACCAGA
721AAGTGGCGCA GGAGATCACC ATCGGCCAGC TCATTCCACA CCTGCAAGGG TCAGATCAAG
781AAATCCAAAC CTATACTATT GCAGTGATTA ATGCGCTTTT CCTGAAGGCT CCTGATGAGA
841GGAGGCAGGA GATGGCGAAT ATTTTGGCTC AGAAGCAACT GCGTTCCATC ATTTTAACAC
901ATGTCATCCG AGCCCAGCGG GCCATCAACA ATGAGATGGC GCACCAGCTG TATGTTCTAC
961AAGTGCTCAC CTTTAACCTC CTGGAAGACA GGATGATGAC CAAAATGGAC CCCCAGGACC
1021AGGCTCAGAG GGACATCATA TTTGAACTTC GAAGAATTGC TTTTGATGCT GAGTCTGAAC
1081CTAACAACAG CAGTGGCAGC ATGGAGAAAC GCAAGTCCAT GTACACGCGA GATTATAAGA
1141AGCTTGGGTT CATTAATCAT GTCAACCCTG CCATGGACTT CACGCAGACT CCACCTGGGA
1201TGTTGGCTCT GGACAACATG CTGTACTTTG CCAAGCACCA CCAAGATGCC TACATCCGGA
1261TTGTGCTTGA GAACAGTAGT CGAGAAGACA AGCATGAATG TCCCTTTGGC CGCAGTAGTA
1321TAGAGCTGAC CAAGATGCTA TGTGAGATCT TGAAAGTGGG CGAGTTGCCT AGTGAGACCT
1381GCAACGACTT CCACCCGATG TTCTTCACCC ACGACAGATC CTTTGAGGAG TTTTTCTGCA
1441TCTGTATCCA GCTCCTGAAC AAGACATGGA AGGAAATGAG GGCAACTTCT GAAGACTTCA
1501ACAAGGTAAT GCAGGTGGTG AAGGAGCAGG TTATGAGAGC ACTTACAACC AAGCCTAGCT
1561CCCTGGACCA GTTCAAGAGC AAACTGCAGA ACCTGAGCTA CACTGAGATC CTGAAAATCC
1621GCCAGTCCGA GAGGATGAAC CAGGAAGATT TCCAGTCCCG CCCGATTTTG GAACTAAAGG
1681AGAAGATTCA GCCAGAAATC TTAGAGCTGA TCAAACAGCA ACGCCTGAAC CGCCTTGTGG
1741AAGGGACCTG CTTTAGGAAA CTCAATGCCC GGCGGAGGCA AGACAAGTTT TGGTATTGTC
1801GGCTTTCGCC AAATCACAAA GTCCTGCATT ACGGAGACTT AGAAGAGAGT CCTCAGGGAG
1861AAGTGCCCCA CGATTCCTTG CAGGACAAAC TGCCGGTGGC AGATATCAAA GCCGTGGTGA
1921CGGGAAAGGA CTGCCCTCAT ATGAAAGAGA AAGGTGCCCT TAAACAAAAC AAGGAGGTGC
1981TTGAACTCGC TTTCTCCATC TTGTATGACT CAAACTGCCA ACTGAACTTC ATCGCTCCTG
2041ACAAGCATGA GTACTGTATC TGGACGGATG GACTGAATGC GCTACTCGGG AAGGACATGA
2101TGAGCGACCT GACGCGGAAT GACCTGGACA CCCTGCTCAG CATGGAAATC AAGCTCCGCC
2161TCCTGGACCT GGAAAACATC CAGATCCCTG ACGCACCTCC GCCGATTCCC AAGGAGCCCA
2221GCAACTATGA CTTCGTCTAT GACTGTAACT TGCCAACTTT CTTGTACAAA GTtggcatta
2281taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)