Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07729
Subject:
NR_103518.2
Aligned Length:
2735
Identities:
1204
Gaps:
1420

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTCAGCCTGGGCGGCACAGCCAGATGCGAGATGCGTCTCTGCTGATCTGAGTCTGCCTGCAGCATGGACCTGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCTTCCCTGAAGCATCTCCAGGGCTGGAGGGACGACTGCCATGCACCGAGGGCTCATCCATCCACAGAGCAGGG  148

Query    1  -----------------ATGACCTCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGCCTGGACCCCAGGACC  57
                             ||||||.||||||||||||||||||||||||||||||||||.||||.||||.|||||
Sbjct  149  CAGTGGGAGGAGACGCCATGACCCCCATCCTCACGGTCCTGATCTGTCTCGGGCTGAGTCTGGGCCCCCGGACC  222

Query   58  CACGTGCAGGCAGGGCCCCTCCCCAAGCCCACCCTCTGGGCTGAGCCAGGCTCTGTGATCACCCAAGGGAGTCC  131
            ||||||||||||||||.|||||||||||||||||||||||||||.||||||||||||||||||||.||||||||
Sbjct  223  CACGTGCAGGCAGGGCACCTCCCCAAGCCCACCCTCTGGGCTGAACCAGGCTCTGTGATCACCCAGGGGAGTCC  296

Query  132  TGTGACCCTCAGGTGTCAGGGGAGCCTGGAGACGCAGGAGTACCATCTATATAGAGAAAAGAAAACAGCACTCT  205
            ||||||||||||||||||||||.|||.||||||.||||||||||.||||||||||||||||||||||||||.||
Sbjct  297  TGTGACCCTCAGGTGTCAGGGGGGCCAGGAGACCCAGGAGTACCGTCTATATAGAGAAAAGAAAACAGCACCCT  370

Query  206  GGATTACACGGATCCCACAGGAGCTTGTGAAGAAGGGCCAGTTCCCCATCCTATCCATCACCTGGGAACATGCA  279
            |||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||..||
Sbjct  371  GGATTACACGGATCCCACAGGAGCTTGTGAAGAAGGGCCAGTTCCCCATCCCATCCATCACCTGGGAACACACA  444

Query  280  GGGCGGTATTGCTGTATCTATGGCAGCCACACTGTAGGCCTCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGT  353
            |||||||||.|||||..||||||.|||.||||||.|||||.|||||||||||||||||||||||||||||||||
Sbjct  445  GGGCGGTATCGCTGTTACTATGGTAGCGACACTGCAGGCCGCTCAGAGAGCAGTGACCCCCTGGAGCTGGTGGT  518

Query  354  GACAGGAGCCTACAGCAAACCCACCCTCTCAGCTCTGCCCAGCCCTGTGGTGACCTCAGGAGGGAATGTGACCA  427
            ||||||||||||||.||||||||||||||||||.|.|||||||||.|||||||.|||||||||||||||.|||.
Sbjct  519  GACAGGAGCCTACATCAAACCCACCCTCTCAGCCCAGCCCAGCCCCGTGGTGAACTCAGGAGGGAATGTAACCC  592

Query  428  TCCAGTGTGACTCACAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGC  501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCCAGTGTGACTCACAGGTGGCATTTGATGGCTTCATTCTGTGTAAGGAAGGAGAAGATGAACACCCACAATGC  666

Query  502  CTGAACTCCCATTCCCATGCCCGTGGGTCATCCCGGGCCATCTTCTCCGTGGGCCCCGTGAGCCCAAGTCGCAG  575
            |||||||||||..||||||||||||||||.|||||.|||||||||||||||||||||||||||||.||||||||
Sbjct  667  CTGAACTCCCAGCCCCATGCCCGTGGGTCGTCCCGCGCCATCTTCTCCGTGGGCCCCGTGAGCCCGAGTCGCAG  740

Query  576  GTGGTCGTACAGGTGCTATGGTTATGACTCGCGCGCTCCCTATGTGTGGTCTCTACCCAGTGATCTCCTGGGGC  649
            |||||.||||||||||||||.||||||||||..|.|||||||||.||||||||||||||||||||||||||.||
Sbjct  741  GTGGTGGTACAGGTGCTATGCTTATGACTCGAACTCTCCCTATGAGTGGTCTCTACCCAGTGATCTCCTGGAGC  814

Query  650  TCCTGGTCCCAGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCGGGTCCTGTCGTGGCCCCTGGGGAGAAG  723
            |||||||||.||||||||||||||||||||||||||||||||||||.||||||.||||||||||||.|||||..
Sbjct  815  TCCTGGTCCTAGGTGTTTCTAAGAAGCCATCACTCTCAGTGCAGCCAGGTCCTATCGTGGCCCCTGAGGAGACC  888

Query  724  CTGACCTTCCAGTGTGGCTCTGATGCCGGCTACGACAGATTTGTTCTGTACAAGGAGTGGGGACGTGACTTCCT  797
            |||||..|.|||||||||||||||||.||||||.||||||||||||||||.|||||..|||.||||||||||||
Sbjct  889  CTGACTCTGCAGTGTGGCTCTGATGCTGGCTACAACAGATTTGTTCTGTATAAGGACGGGGAACGTGACTTCCT  962

Query  798  CCAGCGCCCTGGCCGGCAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCT  871
            .||||.|.|||||...||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCAGCTCGCTGGCGCACAGCCCCAGGCTGGGCTCTCCCAGGCCAACTTCACCCTGGGCCCTGTGAGCCGCTCCT  1036

Query  872  ACGGGGGCCAGTACACATGCTCCGGTGCATACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGAC  945
            |||||||||||||||.|||||.|||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ACGGGGGCCAGTACAGATGCTACGGTGCACACAACCTCTCCTCCGAGTGGTCGGCCCCCAGCGACCCCCTGGAC  1110

Query  946  ATCCTGATCACAGGACAGATCCGTGCCAGACCCTTCCTCTCCGTGCGGCCGGGCCCCACAGTGGCCTCAGGAGA  1019
            |||||||||.||||||||.||..||.||||..||.||||||.||||.||||||||||||.||||||||||||||
Sbjct 1111  ATCCTGATCGCAGGACAGTTCTATGACAGAGTCTCCCTCTCGGTGCAGCCGGGCCCCACGGTGGCCTCAGGAGA  1184

Query 1020  GAACGTGACCCTGCTGTGTCAGTCACAGGGAGGGATGCACACTTTCCTTTTGACCAAGGAGGGGGCAGCTGATT  1093
            |||||||||||||||||||||||||||||||.|||||||.|||||||||.|||||||||||||||||||||||.
Sbjct 1185  GAACGTGACCCTGCTGTGTCAGTCACAGGGATGGATGCAAACTTTCCTTCTGACCAAGGAGGGGGCAGCTGATG  1258

Query 1094  CCCCGCTGCGTCTAAAATCAAAGCGCCAATCTCATAAGTACCAGGCTGAATTCCCCATGAGTCCTGTGACCTCG  1167
            .|||...||||||||.|||||.|..|||||||||.||.|||||||||||||||||||||.|||||||||||||.
Sbjct 1259  ACCCATGGCGTCTAAGATCAACGTACCAATCTCAAAAATACCAGGCTGAATTCCCCATGGGTCCTGTGACCTCA  1332

Query 1168  GCCCACGCGGGGACCTACAGGTGCTACGGCTCACTCAGCTCCAACCCCTACCTGCTGACTCACCCCAGTGACCC  1241
            |||||.||||||||||||||||||||||||||||..||||||||.|||||||||||||||||||||||||||||
Sbjct 1333  GCCCATGCGGGGACCTACAGGTGCTACGGCTCACAGAGCTCCAAACCCTACCTGCTGACTCACCCCAGTGACCC  1406

Query 1242  CCTGGAGCTCGTGGTCTCAGGAGCAGCTGAGACCCTCAGC-CCACCACAAAACAAGTCCGA-CTCCAAGGCTGG  1313
            ||||||||||||||||||||||.|..|||.|..||.|||| ||.|.||  ||||.|.||.| |||||...||||
Sbjct 1407  CCTGGAGCTCGTGGTCTCAGGACCGTCTGGGGGCCCCAGCTCCCCGAC--AACAGGCCCCACCTCCACATCTGG  1478

Query 1314  ---TGAG-------------------------------------------------------------------  1317
               ||||                                                                   
Sbjct 1479  CCCTGAGGACCAGCCCCTCACCCCCACCGGGTCGGATCCCCAGAGTGGTCTGGGAAGGCACCTGGGGGTTGTGA  1552

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1553  TCGGCATCTTGGTGGCCGTCATCCTACTGCTCCTCCTCCTCCTCCTCCTCTTCCTCATCCTCCGACATCGACGT  1626

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1627  CAGGGCAAACACTGGACATCGAGTCCAGCCCAGCTGCCGATGCCCAGGAAGAAAACCTCTATGCTGCCGTGAAG  1700

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1701  CACACACAGCCTGAGGATGGGGTGGAGATGGACACTCGGAGCCCACACGATGAAGACCCCCAGGCAGTGACGTA  1774

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1775  TGCCGAGGTGAAACACTCCAGACCTAGGAGAGAAATGGCCTCTCCTCCTTCCCCACTGTCTGGGGAATTCCTGG  1848

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1849  ACACAAAGGACAGACAGGCGGAAGAGGACAGGCAGATGGACACTGAGGCTGCTGCATCTGAAGCCCCCCAGGAT  1922

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1923  GTGACCTACGCCCAGCTGCACAGCTTGACCCTCAGACGGGAGGCAACTGAGCCTCCTCCATCCCAGGAAGGGCC  1996

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 1997  CTCTCCAGCTGTGCCCAGCATCTACGCCACTCTGGCCATCCACTAGCCCAGGGGGGGACGCAGACCCCACACTC  2070

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2071  CATGGAGTCTGGAATGCATGGGAGCTGCCCCCCCAGTGGACACCATTGGACCCCACCCAGCCTGGATCTACCCC  2144

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2145  AGGAGACTCTGGGAACTTTTAGGGGTCACTCAATTCTGCAGTATAAATAACTAATGTCTCTACAATTTTGAAAT  2218

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2219  AAAGCAACAGACTTCTCAATAATCAATGAAGTAGCTGAGAAAACTAAGTCAGAAAGTGCATTAAACTGAATCAC  2292

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2293  AATGTAAATATTACACATCAAGCGATGAAACTGGAAAACTACAAGCCACGAATGAATGAATTAGGAAAGAAAAA  2366

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2367  AAGTAGGAAATGAATGATCTTGGCTTTCCTATAAGAAATTTAGGGCAGGGCACGGTGGCTCACGCCTGTAATTC  2440

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2441  CAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGTTCAGGAGATCGAGACCATCTTGGCCAACATGGTGAAA  2514

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2515  CCCTGTCTCTCCTAAAAATACAAAAATTAGCTGGATGTGGTGGCAGTGCCTGTAATCCCAGCTATTTGGGAGGC  2588

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2589  TGAGGCAGGAGAATCGCTTGAACCAGGGAGTCAGAGGTTTCAGTGAGCCAAGATCGCACCACTGCTCTCCAGCC  2662

Query 1318  -----------------------------------------------------------------------  1317
                                                                                   
Sbjct 2663  TGGCGACAGAGGGAGACTCCATCTCAAATTAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAAAAAAAA  2733

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