Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07807
Subject:
NM_001146026.1
Aligned Length:
1299
Identities:
1091
Gaps:
81

Alignment

Query    1  ATGCGACCATGGGCTCTGGCAGTGACTAGGTGGCCACCCTCCGCCCCCGTGGGCCAGCGGCGATTCTCTGCGGG  74
            |||.||||||||.||.||||||||||||.|||||||||.||.|||||.|||||.||..|||||.|||||.|..|
Sbjct    1  ATGAGACCATGGACTTTGGCAGTGACTAAGTGGCCACCTTCTGCCCCTGTGGGTCACTGGCGAGTCTCTACAAG  74

Query   75  ACCTGGCAGCACCCCGGGCCAGCTCTGGGGAAGCCCTGGCCTCGAGGGCCCCCTGGCCAGCCCGCCTGCCCGGG  148
            .|.|.||||||..||.||||||||||||||||                                          
Sbjct   75  GCTTAGCAGCAGTCCAGGCCAGCTCTGGGGAA------------------------------------------  106

Query  149  ATGAGCGCTTACCCTCCCAGCAGCCGCCGTCCCGACCTCCACACCTCCCCGTAGAGGAGCGCCGAGCCTCGGCT  222
                                             ||||..||.|||||.|.||||||||||.|||||||||.|||
Sbjct  107  ---------------------------------GACCATCAAACCTCTCTGTAGAGGAGCACCGAGCCTCAGCT  147

Query  223  CCTGCCGGCGGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAGCA  296
            |||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  148  CCTGCCGGCAGGAGCCCCCGAATGCTGCACCCAGCCACCCAGCAGAGCCCGTTCATGGTTGATCTCCACGAACA  221

Query  297  GGTGCACCAGGGACCTGTCCCTCTGTCCTACACGGTCACCACAGTGACGACCCAAGGCTTCCCCTTGCCTACAG  370
            .|||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||.
Sbjct  222  AGTGCACCAGGGACCTGTCCCTCTGTCCTACACGGTCACCACAGTGACAACCCAAGGCTTCCCTTTGCCTACAA  295

Query  371  GCCAGCACATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCATTACCCC  444
            ||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  296  GCCAACACATCCCTGGCTGCAGTGCCCAGCAGCTCCCAGCATGCTCCGTGATGTTCAGTGGGCAGCACTACCCC  369

Query  445  CTCTGCTGCCTCCCGCCCCC---GCTTATCCAGGCGTGCACCATGCAGCAGCTGCCTGTGCCCTATCAGGCCTA  515
            ||||||||||||||.||.||   |||.||||||||||||||||||||||||||.||||.||||||.||..||||
Sbjct  370  CTCTGCTGCCTCCCACCTCCGCAGCTGATCCAGGCGTGCACCATGCAGCAGCTCCCTGGGCCCTACCACACCTA  443

Query  516  CCCCCACCTCATCTCCAGTGACCACTACATCCTGCACCCCCCACCACCGGCCCCACCCCCCCAGCCCACCCACA  589
            |||||||||||||||||||||||||||||||||.|||||.|||||.||.||||||||.||||||||.|||||||
Sbjct  444  CCCCCACCTCATCTCCAGTGACCACTACATCCTTCACCCACCACCGCCAGCCCCACCGCCCCAGCCTACCCACA  517

Query  590  TGGCGCCCCTGGGGCAGTTTGTGTCTCTGCAGACCCAGCACCCTCGGATGCCCCTCCAGCGGCTCGACAACGAC  663
            ||||.||.||.||||||||||||||.|||||||||||||||||.||.||||||||.||||||||.||.|||||.
Sbjct  518  TGGCACCGCTTGGGCAGTTTGTGTCCCTGCAGACCCAGCACCCACGTATGCCCCTGCAGCGGCTGGATAACGAG  591

Query  664  GTGGACCTGCGTGGGGACCAGCCCTCCCTGGGCAGCTTCACCTACTCCACCTCTGCGCCTGGCCCAGCCCTTTC  737
            .|||||||.||.||.|||||||.|.||.||||.||||||||.||||||||||||||..|||||||||||.|.||
Sbjct  592  ATGGACCTTCGAGGAGACCAGCACCCCTTGGGTAGCTTCACTTACTCCACCTCTGCCACTGGCCCAGCCTTGTC  665

Query  738  CCCGTCGGTGCCCCTGCACTACCTGCCCCACGATCCGCTGCACCAGGAGCTGTCCTTTGGTGTGCCATATTCTC  811
            .||.||.||||||||.||||||||.|||||.|||||.|||||||||||||||||||||||||||||||||||.|
Sbjct  666  GCCCTCAGTGCCCCTTCACTACCTACCCCATGATCCACTGCACCAGGAGCTGTCCTTTGGTGTGCCATATTCCC  739

Query  812  ACATGATGCCACGGAGACTGAGCACCCAGAGATACCGCCTGCAGCAGCCACTGCCCCCGCCGCCCCCACCCCCA  885
            |||||||||||||.|||||||||||.|||||||||||||||||.|||||.|||   ||.||.||||||||.||.
Sbjct  740  ACATGATGCCACGAAGACTGAGCACACAGAGATACCGCCTGCAACAGCCGCTG---CCACCACCCCCACCGCCG  810

Query  886  CCCCCACCTCCCTACTACCCCAGCTTCCTGCCCTACTTCCTCTCGATGCTGCCAATGTCACCAACAGCAATGGG  959
            ||.|||||..|.||||||||.||||||||.|||||||||||.||.|||||||||||||||||.||..|..||||
Sbjct  811  CCGCCACCATCTTACTACCCAAGCTTCCTACCCTACTTCCTTTCAATGCTGCCAATGTCACCGACCACCGTGGG  884

Query  960  GCCCACCATCAGCCTGGACCTGGACGTGGATGATGTGGAGATGGAGAACTATGAGGCCCTCCTGAACCTGGCCG  1033
            .||||||||||||.|||||||||||||||||||.||.||||||||||||||||||||.||||||||||||||.|
Sbjct  885  CCCCACCATCAGCTTGGACCTGGACGTGGATGACGTAGAGATGGAGAACTATGAGGCTCTCCTGAACCTGGCTG  958

Query 1034  AGCGGCTGGGAGATGCCAAGCCCCGGGGTCTCACCAAAGCAGACATAGAGCAGCTCCCGTCGTACCGCTTTAAC  1107
            |||||||||||||.||||||||||||||.|||||||||||||||||.||.||.||.||||||||.|||||||||
Sbjct  959  AGCGGCTGGGAGACGCCAAGCCCCGGGGCCTCACCAAAGCAGACATCGAACAACTGCCGTCGTATCGCTTTAAC  1032

Query 1108  CCGGACAGCCATCAGTCGGAGCAGACGCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGCGCGGCAGCTGCTCCG  1181
            ||.||||||||||||||.||||||||.|||||||||||||||||||||||||||||||.||||||.||||||||
Sbjct 1033  CCTGACAGCCATCAGTCTGAGCAGACTCTGTGTGTGGTCTGCTTCAGTGACTTCGAGGTGCGGCAACTGCTCCG  1106

Query 1182  AGTCCTCCCCTGCAACCATGAGTTCCACACCAAGTGTGTTGACAAGTGGTTGAAGGCCAACCGGACGTGTCCCA  1255
            ||||||||||||||||||.||||||||..|||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1107  AGTCCTCCCCTGCAACCACGAGTTCCATGCCAAGTGTGTTGACAAGTGGTTGAAGGCCAACCGGACCTGTCCCA  1180

Query 1256  TCTGCCGGGCCGACGCCTCCGAGGTGCCCAGGGAGGCTGAG  1296
            |.||||||||.||.|||||||||||||||||||||||.|||
Sbjct 1181  TTTGCCGGGCGGATGCCTCCGAGGTGCCCAGGGAGGCCGAG  1221

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