Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07865
- Subject:
- XM_017010594.1
- Aligned Length:
- 5378
- Identities:
- 1244
- Gaps:
- 4093
Alignment
Query 1 ----------------ATGGCGTCGGAGCTAGAGCCAGA---------GGT-------------GCAGGCC--- 33
||.||| ||.|..||.|||.|| ||| |||||||
Sbjct 1 ATGTTCGGCCGAGGAGATTGCG--GGGGTGAGTGCCGGAACCCGGGCGGGTGCGTCTGCCCCTCGCAGGCCGCG 72
Query 34 -------------ATCGA------------CCGGAG--------------CTTGCTGGAA-----TGT-TCGGC 62
|.||| |.|||| |||| .|||| ||| .||||
Sbjct 73 CCTGTGGGGAGGAACCGACTCCTGGACGTCCTGGAGCAGCCCGACCCAGACTTG-GGGAAACAGCTGTGCCGGC 145
Query 63 CGAGGAGATTGC----GGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCAC 132
| .|.|| .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 146 C------CTCGCCTTGTGGGAAATGGCTGCAAGCAACTGACCTCACTAGAGAAGTGTACCAGCATTTAGCCCAC 213
Query 133 TATGTACCCAAAATCTACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTT 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 214 TATGTACCCAAAATCTACTGCAGGGGTCCCAACCCTTTTCCACAGAAAGAAGACATGCTGGCACAGCATGTTTT 287
Query 207 GTTGGGACCAATGGAATGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACA 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 288 GTTGGGACCAATGGAATGGTACCTTTGTGGTGAAGATCCTGCATTTGGATTTCCAAAACTTGAGCAAGCAAACA 361
Query 281 AACCTTCTCATCTTTGTGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGAT 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 362 AACCTTCTCATCTTTGTGGTCGTGTTTTTAAAGTAGGAGAGCCTACATATTCTTGCAGAGACTGTGCAGTTGAT 435
Query 355 CCAACTTGTGTTTTGTGCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATC 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 436 CCAACTTGTGTTTTGTGCATGGAGTGCTTTTTGGGAAGTATTCACAGAGATCATCGATATAGGATGACAACATC 509
Query 429 AGGAGGTGGAGGTTTCTGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAAC 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 510 AGGAGGTGGAGGTTTCTGTGACTGTGGTGATACTGAAGCCTGGAAAGAGGGTCCTTACTGTCAAAAACATGAAC 583
Query 503 TTAACACCTCTGAAATTGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTAT 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 584 TTAACACCTCTGAAATTGAGGAAGAAGAGGATCCTCTTGTTCATTTATCAGAAGATGTGATAGCAAGAACTTAT 657
Query 577 AACATTTTTGCTATTACGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGA 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 AACATTTTTGCTATTACGTTTCGGTATGCAGTAGAAATATTAACCTGGGAAAAAGAAAGTGAATTGCCAGCAGA 731
Query 651 TTTAGAGATGGTAGAGAAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTACGAACAAG 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 732 TTTAGAGATGGTAGAGAAGAGTGACACCTACTATTGCATGCTGTTTAATGATGAGGTTCACACCTATGAACAAG 805
Query 725 TTATTTATACTCTTCAGAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGA 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 TTATTTATACTCTTCAGAAAGCTGTTAACTGTACACAAAAAGAAGCTATTGGTTTTGCAACTACAGTAGATCGA 879
Query 799 GATGGGCGTAGGTCTGTTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATAC 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 GATGGGCGTAGGTCTGTTCGATATGGAGATTTTCAGTATTGTGAGCAAGCAAAATCAGTAATTGTGAGAAATAC 953
Query 873 CAGTAGACAGACAAAGCCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGA 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 CAGTAGACAGACAAAGCCACTCAAAGTTCAAGTTATGCATTCGTCTATTGTCGCACATCAGAATTTTGGTTTGA 1027
Query 947 AACTTTTGTCTTGGCTGGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTA 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1028 AACTTTTGTCTTGGCTGGGAAGTATTATTGGATATTCAGATGGCCTTCGCCGGATTTTATGTCAAGTTGGTTTA 1101
Query 1021 CAAGAAGGGCCAGATGGTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGG 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102 CAAGAAGGGCCAGATGGTGAAAACTCTTCTCTAGTGGACAGACTGATGCTTAGTGATTCCAAATTATGGAAAGG 1175
Query 1095 TGCTAGGAGTGTATATCATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTG 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1176 TGCTAGGAGTGTATATCATCAGTTGTTCATGAGCAGTCTGCTTATGGATTTGAAATACAAGAAACTATTTGCTG 1249
Query 1169 TTCGATTTGCAAAAAACTATGAGCGTTTGCAGAGTGATTATGTGACAGATGACCACGACAGAG-AGTTTTCAGT 1241
||||||||||||||||.||..|||..||||||||.||||.|.||...|||||.|||||..||| ||| ||
Sbjct 1250 TTCGATTTGCAAAAAATTACCAGCAGTTGCAGAGAGATTTTATGGAGGATGATCACGAGCGAGCAGT-----GT 1318
Query 1242 CGCAGAC----CTCTCGGTTCAGATATTCACGGTTCCTTCACTTTTCTCTATCTCT-GCTGGGCGCAGTGGCTC 1310
||..||| ||.||.||.|||.|.|||||.| ||| ||| |||| ||| ||.| .||||
Sbjct 1319 CGGTGACTGCTCTATCTGTCCAGTTCTTCACCG------CAC------CTA-CTCTGGCT---CGAA--TGCTC 1374
Query 1311 ACCTCTG------------------------------------------------------------------- 1317
|.|.|.|
Sbjct 1375 ATCACAGAAGAAAACTTAATGAGCATTATCATTAAGACTTTTATGGATCATTTGAGACATCGAGATGCCCAGGG 1448
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1449 CAGATTTCAGTTTGAACGATACACTGCTTTACAAGCCTTCAAATTTAGGAGAGTACAGAGCCTTATTTTAGATC 1522
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1523 TCAAGTATGTGTTAATTAGCAAACCAACTGAATGGTCAGATGAGCTGAGGCAGAAGTTCCTAGAAGGGTTTGAT 1596
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1597 GCCTTTTTGGAATTACTAAAATGTATGCAGGGAATGGATCCAATTACACGTCAAGTAGGACAACATATTGAAAT 1670
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1671 GGAACCAGAGTGGGAAGCAGCCTTCACACTACAAATGAAATTAACACATGTCATTTCAATGATGCAGGACTGGT 1744
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1745 GTGCTTCAGATGAAAAAGTGTTAATCGAAGCTTACAAGAAATGTCTCGCTGTACTGATGCAGTGTCATGGTGGT 1818
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1819 TATACTGATGGTGAACAGCCAATCACACTAAGCATTTGTGGACATTCAGTGGAAACTATCAGATACTGTGTTTC 1892
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1893 CCAAGAAAAAGTTAGCATTCACCTCCCAGTTTCTCGCTTACTTGCAGGTTTACATGTATTATTAAGCAAAAGTG 1966
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 1967 AAGTGGCATATAAATTTCCAGAGCTCCTACCTCTAAGTGAACTTAGCCCACCCATGTTGATAGAACACCCTCTT 2040
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2041 AGATGTCTTGTTCTGTGTGCCCAAGTACATGCCGGAATGTGGAGAAGAAATGGGTTCTCTCTAGTAAACCAGAT 2114
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2115 TTATTACTACCATAATGTGAAATGCAGACGTGAGATGTTTGACAAGGATGTAGTAATGCTTCAGACAGGTGTCT 2188
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2189 CCATGATGGATCCAAATCATTTCCTGATGATCATGCTCAGCCGCTTTGAACTTTATCAGATTTTCAGTACTCCA 2262
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2263 GACTATGGAAAAAGATTTAGTTCTGAGATTACCCATAAGGATGTTGTTCAGCAGAACAATACTCTAATAGAAGA 2336
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2337 AATGCTATACCTCATTATAATGCTTGTTGGAGAGAGATTTAGTCCTGGAGTTGGACAGGTAAATGCTACAGATG 2410
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2411 AAATCAAGCGAGAGATTATCCATCAGTTGAGTATCAAGCCTATGGCTCATAGTGAATTGGTAAAGTCTTTACCT 2484
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2485 GAAGATGAGAACAAGGAGACTGGCATGGAGAGTGTAATCGAAGCAGTTGCCCATTTCAAGAAACCTGGATTAAC 2558
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2559 AGGACGAGGCATGTATGAACTGAAACCAGAATGTGCCAAAGAGTTCAACTTGTATTTCTATCACTTTTCAAGGG 2632
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2633 CAGAACAGTCCAAGGCAGAAGAAGCGCAACGGAAATTGAAAAGACAAAATAGAGAAGATACAGCACTCCCACCT 2706
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2707 CCGGTGTTGCCTCCATTCTGCCCTCTGTTTGCAAGCCTGGTTAACATTTTGCAGTCAGATGTCATGTTGTGCAT 2780
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2781 CATGGGAACAATTCTGCAATGGGCTGTGGAACATAATGGATATGCCTGGTCAGAGTCCATGCTGCAAAGGGTGT 2854
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2855 TACATTTAATTGGCATGGCACTACAAGAAGAAAAACAACATTTAGAGAATGTCACGGAAGAGCATGTAGTAACA 2928
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 2929 TTTACCTTCACTCAGAAGATATCAAAACCTGGTGAAGCGCCAAAAAATTCTCCTAGCATACTAGCTATGCTGGA 3002
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3003 AACACTACAAAATGCTCCCTACCTAGAAGTCCACAAAGACATGATTCGGTGGATATTGAAGACTTTTAATGCTG 3076
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3077 TTAAAAAGATGAGGGAGAGTTCACCTACCAGTCCCGTGGCAGAGACAGAAGGAACCATAATGGAAGAGAGTTCA 3150
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3151 AGGGACAAAGACAAAGCTGAGAGGAAGAGAAAAGCAGAGATTGCCAGACTGCGCAGAGAAAAGATCATGGCTCA 3224
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3225 GATGTCTGAAATGCAGCGGCATTTTATTGATGAAAACAAAGAACTCTTTCAGCAGACATTAGAACTGGATGCCT 3298
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3299 CAACCTCTGCTGTTCTTGATCATAGCCCTGTGGCTTCAGATATGACACTTACAGCACTGGGCCCCGCACAAACT 3372
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3373 CAGGTTCCTGAACAAAGACAATTCGTTACATGTATATTGTGTCAAGAGGAGCAAGAAGTTAAAGTGGAAAGCAG 3446
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3447 GGCAATGGTCTTGGCAGCATTTGTTCAGAGATCAACTGTATTATCAAAAAACAGAAGTAAATTTATTCAAGATC 3520
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3521 CAGAAAAATATGATCCATTATTCATGCACCCTGATCTGTCTTGTGGAACACACACTAGTAGCTGTGGGCACATT 3594
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3595 ATGCATGCCCATTGTTGGCAAAGGTATTTTGATTCCGTTCAAGCTAAAGAACAGCGAAGGCAACAGAGATTACG 3668
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3669 CTTACATACGAGCTATGATGTAGAAAACGGAGAATTCCTTTGCCCCCTTTGTGAATGCTTGAGTAATACTGTTA 3742
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3743 TTCCTCTGCTGCTTCCTCCAAGAAATATTTTTAACAACAGGTTAAATTTTTCAGACCAACCAAATCTGACTCAG 3816
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3817 TGGATTAGAACAATATCTCAGCAAATAAAAGCATTACAGTTTCTTAGGAAAGAAGAAAGTACTCCTAATAATGC 3890
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3891 CTCTACAAAGAATTCAGAAAATGTGGATGAATTACAGCTCCCTGAAGGGTTCAGGCCTGATTTTCGTCCTAAGA 3964
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 3965 TCCCTTATTCTGAGAGCATAAAAGAAATGCTAACGACATTTGGAACTGCTACCTACAAGGTGGGACTAAAGGTT 4038
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4039 CATCCCAATGAAGAGGATCCTCGTGTTCCCATAATGTGTTGGGGTAGCTGCGCGTACACCATCCAAAGCATAGA 4112
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4113 AAGAATTTTGAGTGATGAAGATAAACCATTGTTTGGTCCTTTACCTTGCAGACTGGATGACTGTCTTAGGTCAT 4186
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4187 TGACGAGATTTGCCGCAGCACACTGGACAGTGGCATCAGTTTCAGTGGTGCAAGGACATTTTTGTAAACTTTTT 4260
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4261 GCATCACTGGTGCCTAATGACAGCCATGAGGAACTTCCATGCATATTAGATATTGACATGTTTCATTTATTGGT 4334
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4335 GGGCTTGGTGCTTGCATTTCCTGCGTTGCAGTGTCAGGATTTTTCAGGGATCAGCCTTGGCACTGGAGACCTTC 4408
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4409 ACATTTTCCATCTGGTTACTATGGCACACATCATACAGATCTTACTTACCTCATGTACAGAAGAGAATGGCATG 4482
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4483 GATCAAGAAAATCCCCCTTGTGAAGAAGAATCAGCAGTTCTTGCTTTGTATAAAACACTTCACCAGTATACGGG 4556
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4557 AAGTGCCTTGAAAGAAATACCATCCGGCTGGCATCTGTGGAGGAGTGTCAGAGCTGGAATCATGCCTTTCCTGA 4630
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4631 AGTGTTCTGCTTTATTTTTTCATTACTTAAATGGAGTTCCTTCCCCACCCGACATTCAAGTTCCTGGAACAAGC 4704
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4705 CATTTTGAACATTTATGTAGCTATCTTTCCCTACCAAACAACCTCATTTGCCTTTTTCAAGAAAATAGTGAGAT 4778
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4779 AATGAATTCACTGATTGAAAGTTGGTGCCGTAACAGTGAAGTTAAAAGATATCTAGAAGGTGAAAGAGATGCTA 4852
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4853 TAAGATATCCAAGAGAATCTAACAAATTAATAAACCTTCCAGAGGATTACAGCAGCCTCATTAATCAAGCATCC 4926
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 4927 AATTTCTCGTGCCCGAAATCAGGTGGTGATAAGAGCAGAGCCCCAACTCTGTGCCTTGTGTGCGGATCTCTGCT 5000
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5001 GTGCTCCCAGAGTTACTGCTGCCAGACTGAACTGGAAGGGGAGGATGTAGGAGCCTGCACAGCTCACACCTACT 5074
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5075 CCTGTGGCTCTGGAGTGGGCATCTTCCTGAGAGTACGGGAATGTCAGGTGCTATTTTTAGCTGGCAAAACCAAA 5148
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5149 GGCTGTTTTTATTCTCCTCCTTACCTTGATGACTATGGGGAGACCGACCAGGGACTCAGACGGGGAAATCCTTT 5222
Query 1318 -------------------------------------------------------------------------- 1317
Sbjct 5223 ACATTTATGCAAAGAGCGATTCAAGAAGATTCAGAAGCTCTGGCACCAACACAGTGTCACAGAGGAAATTGGAC 5296
Query 1318 -------------------------------------------------- 1317
Sbjct 5297 ATGCACAGGAAGCCAATCAGACACTGGTTGGCATTGACTGGCAACATTTA 5346
