Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_07959
- Subject:
- XM_017000962.1
- Aligned Length:
- 2893
- Identities:
- 1538
- Gaps:
- 1334
Alignment
Query 1 ATGGCGTCAAACTCAACTAAGTCTTTCCTGGCAGATGCCGGCTATGGCGAACAGGAACTGGATGCCAACTCTGC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGTCAAACTCAACTAAGTCTTTCCTGGCAGATGCCGGCTATGGCGAACAGGAACTGGATGCCAACTCTGC 74
Query 75 CCTTATGGAATTGGACAAAGGCCTAAGATCTGGCAAACTTGGTGAACAGTGTGAAGCAGTTGTTCGCTTTCCCA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCTTATGGAATTGGACAAAGGCCTAAGATCTGGCAAACTTGGTGAACAGTGTGAAGCAGTTGTTCGCTTTCCCA 148
Query 149 GACTTTTTCAGAAGTATCCATTCCCTATTCTTATCAATTCTGCATTCCTAAAGTTAGCTGATGTTTTCAGAGTT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GACTTTTTCAGAAGTATCCATTCCCTATTCTTATCAATTCTGCATTCCTAAAGTTAGCTGATGTTTTCAGAGTT 222
Query 223 GGAAATAATTTCCTGAGGCTATGTGTTCTTAAAGTTACCCAACAAAGTGAGAAACATTTGGAGAAGATTCTAAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGAAATAATTTCCTGAGGCTATGTGTTCTTAAAGTTACCCAACAAAGTGAGAAACATTTGGAGAAGATTCTAAA 296
Query 297 TGTGGATGAATTTGTGAAGAGAATTTTTTCTGTGATTCATAGTAATGATCCTGTGGCAAGAGCCATCACCCTCC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGTGGATGAATTTGTGAAGAGAATTTTTTCTGTGATTCATAGTAATGATCCTGTGGCAAGAGCCATCACCCTCC 370
Query 371 GGATGTTGGGAAGTCTGGCATCAATAATTCCTGAGAGGAAGAATGCTCATCATAGTATTCGTCAGAGTTTAGAT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGATGTTGGGAAGTCTGGCATCAATAATTCCTGAGAGGAAGAATGCTCATCATAGTATTCGTCAGAGTTTAGAT 444
Query 445 TCACATGATAATGTAGAAGTTGAAGCTGCTGTTTTTGCTGCTGCAAACTTCTCTGCACAGTCAAAGGATTTTGC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCACATGATAATGTAGAAGTTGAAGCTGCTGTTTTTGCTGCTGCAAACTTCTCTGCACAGTCAAAGGATTTTGC 518
Query 519 TGTAGGAATCTGTAACAAAATCAGTGAAATGATTCAAGGTTTAGCGACACCAGTAGACTTGAAGCTAAAATTGA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGTAGGAATCTGTAACAAAATCAGTGAAATGATTCAAGGTTTAGCGACACCAGTAGACTTGAAGCTAAAATTGA 592
Query 593 TACCCATTCTACAGCACATGCACCATGATGCAATCTTGGCTTCCAGTGCTCGTCAGCTTTTACAACAGCTGGTC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TACCCATTCTACAGCACATGCACCATGATGCAATCTTGGCTTCCAGTGCTCGTCAGCTTTTACAACAGCTGGTC 666
Query 667 ACATCCTATCCGTCCACCAAAATGGTGATTGTGTCTTTGCACACTTTCACTCTGCTTGCAGCGTCATCTTTGGT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACATCCTATCCGTCCACCAAAATGGTGATTGTGTCTTTGCACACTTTCACTCTGCTTGCAGCGTCATCTTTGGT 740
Query 741 TGATACACCTAAGCAGATTCAGCTTCTGTTGCAGTATTTGAAGAATGATCCCAGGAAGGCAGTAAAGAGACTTG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGATACACCTAAGCAGATTCAGCTTCTGTTGCAGTATTTGAAGAATGATCCCAGGAAGGCAGTAAAGAGACTTG 814
Query 815 CTATTCAAGATCTGAAATTACTTGCTAATAAAACACCACATACTTGGAGTAGGGAGAATATTCAGGCACTTTGT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTATTCAAGATCTGAAATTACTTGCTAATAAAACACCACATACTTGGAGTAGGGAGAATATTCAGGCACTTTGT 888
Query 889 GAGTGTGCCCTCCAGACTCCTTATGACAGCTTAAAACTAGGGATGTTGTCTGTCCTTTCCACACTATCAGGGAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAGTGTGCCCTCCAGACTCCTTATGACAGCTTAAAACTAGGGATGTTGTCTGTCCTTTCCACACTATCAGGGAC 962
Query 963 CATCGCCATCAAACATTACTTCAGTATAGTTCCAGGAAATGTGAGTTCTTCTCCCAGATCTTCTGATTTAGTCA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CATCGCCATCAAACATTACTTCAGTATAGTTCCAGGAAATGTGAGTTCTTCTCCCAGATCTTCTGATTTAGTCA 1036
Query 1037 AATTAGCCCAAGAGTGCTGTTACCATAATAACAGGGGCATTGCAGCTCATGGAGTTAGAGTCCTAACTAATATA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AATTAGCCCAAGAGTGCTGTTACCATAATAACAGGGGCATTGCAGCTCATGGAGTTAGAGTCCTAACTAATATA 1110
Query 1111 ACTGTTTCTTGTCAAGAAAAGGATCTTTTGGCACTGGAACAAGATGCTGTCTTTGGCCTGGAATCCCTACTGGT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACTGTTTCTTGTCAAGAAAAGGATCTTTTGGCACTGGAACAAGATGCTGTCTTTGGCCTGGAATCCCTACTGGT 1184
Query 1185 ACTTTGTAGTCAAGATGATAGTCCAGGTGCTCAGGCCACTTTAAAGATTGCTCTAAACTGTATGGTGAAGTTGG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACTTTGTAGTCAAGATGATAGTCCAGGTGCTCAGGCCACTTTAAAGATTGCTCTAAACTGTATGGTGAAGTTGG 1258
Query 1259 CCAAGGGCAGGCCCCGTCTTAGCCAGTCAGTAGTTGAGACCTTGTTGACTCAATTGCACAGTGCTCAAGACGCT 1332
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCAAGGGCAGGCCCCATCTTAGCCAGTCAGTAGTTGAGACCTTGTTGACTCAATTGCACAGTGCTCAAGACGCT 1332
Query 1333 GCCCGGATTTTGATGTGCCATTGCCTGGCAGCCATTGCCATGCAACTGCCGGTGCTGGGTGATGGGATGCTTGG 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCCCGGATTTTGATGTGCCATTGCCTGGCAGCCATTGCCATGCAACTGCCGGTGCTGGGTGATGGGATGCTTGG 1406
Query 1407 TGACCTCATGGAGCTGTACAAGGTGATTGGACGATCAGCCACAGACAAGCAACAAGAACTTCTGGTGAGTTTGG 1480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGACCTCATGGAGCTGTACAAGGTGATTGGACGATCAGCCACAGACAAGCAACAAGAACTTCT----------- 1469
Query 1481 CTACTGTGATTTTTGTTGCAAGTCAGAAGGCATTGTCTGTGGAAAGTAAGGCAGTAATTAAGCAGCAGCTTGAA 1554
||.||.||||| |||| ||
Sbjct 1470 -------------------------GAGGGAATTGT---------GTAA------AA----------------- 1486
Query 1555 AGTGTCTCCAATGGATGGACTGTATACCGT-ATTGCCAGACAGGCTTCCAGAATGGGTAATCATGACATGGCCA 1627
|||.|||...||.||.| ||| .|||.||||||..|||.|.|.|| |||.|||
Sbjct 1487 -------------GATTGACCCCATCCCATCATT--------TGCTGCCAGAAAAGGTTACCTTG--ATGACCA 1537
Query 1628 AA------GAGCTTTATCAGAGTTTGCTGACTCAGGTTGCCTCAGAACATTTCTACTTCTGGCTAAATAGTTTG 1695
|| ||.|||||| .|||.||||.||
Sbjct 1538 AATGTATGGATCTTTAT---------ATGAATCAGCTT------------------------------------ 1566
Query 1696 AAGGAGTTTTCACATGCAGAACAGTGTCTCACTGGGTTGCAAGAGGAAAATTATAGTTCAGCACTTTCTTGCAT 1769
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 1770 TGCTGAATCTTTAAAATTCTATCACAAAGGGATTGCTTCCTTAACAGCAGCTAGTACACCACTGAATCCTTTAA 1843
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 1844 GCTTTCAGTGTGAATTTGTAAAACTCAGGATTGACCTTTTACAAGCCTTCTCTCAACTTATCTGTACTTGTAAT 1917
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 1918 AGCCTGAAGACAAGCCCACCACCTGCAATTGCCACAACAATTGCCATGACCTTAGGAAATGACCTCCAGAGGTG 1991
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 1992 TGGTCGCATCTCCAATCAGATGAAACAGTCCATGGAAGAATTTCGAAGCCTTGCTTCTCGATATGGAGATCTTT 2065
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2066 ACCAGGCATCTTTTGATGCTGACTCAGCAACTTTGAGGAATGTTGAACTACAGCAGCAGAGCTGTTTACTGATA 2139
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2140 TCTCATGCAATAGAAGCCCTGATTTTGGATCCAGAATCAGCAAGTTTCCAGGAATATGGATCTACTGGAACAGC 2213
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2214 CCATGCTGATAGTGAATATGAAAGAAGAATGATGTCTGTATATAATCATGTCTTGGAGGAGGTAGAATCACTCA 2287
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2288 ATCGGAAATATACCCCTGTTTCTTATATGCACACAGCATGCCTCTGCAATGCCATCATTGCTTTGCTGAAAGTT 2361
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2362 CCCCTTTCTTTCCAGAGATATTTTTTCCAGAAACTACAGTCTACCAGCATCAAGCTTGCTCTGTCACCATCGCC 2435
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2436 CCGGAATCCTGCAGAGCCCATTGCTGTCCAGAATAACCAGCAGCTGGCGCTAAAGGTAGAGGGAGTGGTTCAGC 2509
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2510 ACGGATCTAAACCAGGACTCTTCCGCAAAATTCAGTCTGTCTGTCTGAATGTTTCTTCCACACTGCAGAGTAAA 2583
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2584 TCTGGACAAGACTACAAGATACCCATTGACAACATGACCAATGAGATGGAGCAAAGGGTTGAACCTCATAATGA 2657
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2658 TTACTTCAGTACTCAATTTCTGTTGAACTTTGCTATCCTTGGAACACACAACATTACAGTGGAATCTTCTGTGA 2731
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2732 AAGATGCCAATGGTATAGTATGGAAGACTGGTCCCAGAACTACCATATTTGTAAAATCCCTGGAAGACCCTTAT 2805
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2806 TCCCAGCAAATTCGCTTACAACAGCAGCAAGCCCAGCAGCCATTACAGCAGCAGCAGCAACGCAATGCCTACAC 2879
Sbjct 1567 -------------------------------------------------------------------------- 1566
Query 2880 ACGGTTT 2886
Sbjct 1567 ------- 1566
