Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_08019
• Subject: XM_017024449.2
• Aligned Length: 1540
• Identities: 802
• Gaps: 719

Alignment

Query    1  ATGAAGTGTGAGCACTGCACGCGCAAGGAATGTAGTAAGAAAACAAAAACTGATGACCAAGAGAATGTGTCAGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CGATGCACCGAGTCCAGCCCAGGAAAATGGAGAGAAGGGAGAATTCCACAAGTTGGCTGATGCCAAGATATTTT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGAGCGACTGCCTGGCATGTGACAGCTGTATGACTGCAGAGGAAGGAGTCCAACTTTCCCAGCAAAATGCCAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GACTTCTTCCGCGTTCTGAACCTTAACAAGAAATGTGATACCTCAAAGCACAAAGTGCTGGTAGTGTCTGTGTG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TCCTCAATCTTTGCCTTATTTTGCTGCTAAATTCAACCTCAGTGTAACTGATGCATCCAGAAGACTCTGTGGTT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TCCTCAAAAGTCTTGGGGTGCACTATGTATTTGATACGACGATAGCTGCGGATTTTAGTATCCTGGAGAGTCAA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AAAGAATTCGTGCGTCGCTATCGCCAGCACAGTGAGGAGGAACGCACCCTGCCCATGCTGACCTCTGCCTG---  515
                                                 |.|..|.||.|||.|||  |.|    |||.||.|   
Sbjct    1  -------------------------------------ATGGGCTCAGCCTTCCC--GGT----TCTTCCAGGAG  31

Query  516  --TC--CTGGCTGGGTCCGATACGCCGAGCGGG---TGC-------TGGGTCG-CCCCATCACTGCCCACCTCT  574
              ||  |||||||||               |||   |||       ||||..| ||.||               
Sbjct   32  GCTCCACTGGCTGGG---------------GGGCTTTGCAGATGTTTGGGAGGACCACA---------------  75

Query  575  GCACCGCCAAGTCC------CCCCAGCAG---GTCATGG-------GCTCTTTGGTGAAGGATTATTTCGCCAG  632
                  ||.|||||      ...||||||   |.|||||       ||    |||||         .||     
Sbjct   76  ------CCCAGTCCTGAGGGAGGCAGCAGACAGACATGGATGGAGTGC----TGGTG---------CTC-----  125

Query  633  ACAGCAGAACCTGTCTCCAGAGAAGATTTTCCACGTCATTGTGGCCCCTTGTTATGACAAGAAGCTGGAGGCTC  706
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  126  ------GAACCTGTCTCCAGAGAAGATTTTCCACGTCATTGTGGCCCCTTGTTATGACAAGAAGCTGGAGGCTC  193

Query  707  TTCAGGAAAGCCTTCCCCCTGCTTTGCATGGCTCCCGGGGCGCTGACTGCGTGTTAACATCAGAAATTAGCCAG  780
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct  194  TTCAGGAAAGCCTTCCCCCTGCTTTGCATGGCTCCCGGGGCGCTGACTGCGTGTTAACATC-------------  254

Query  781  GCGTGGTGGTGCACACCTGTGATCACAGCTACTCGGGAGGCTGCGGCAAGAGAATCACTTGAACCCGGGAGGCA  854
                                                                                      
Sbjct  255  --------------------------------------------------------------------------  254

Query  855  GAGGTTACAGCGAGACAAGATTGCACCACTGGACTCCAGCCTGGGCGGCGGAGGTGAAATTGCTCAAATAATGG  928
                                                               |||||||||||||||||||||||
Sbjct  255  ---------------------------------------------------AGGTGAAATTGCTCAAATAATGG  277

Query  929  AGCAAGGTGACCTCTCAGTGAGAGATGCTGCCGTCGACACTCTGTTTGGAGACTTGAAGGAGGACAAAGTGACG  1002
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  278  AGCAAGGTGACCTCTCAGTGAGAGATGCTGCCGTCGACACTCTGTTTGGAGACTTGAAGGAGGACAAAGTGACG  351

Query 1003  CGTCATGATGGAGCCAGCTCAGACGGGCACCTGGCACACATCTTCAGACATGCGGCCAAGGAGCTGTTCAACGA  1076
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  352  CGTCATGATGGAGCCAGCTCAGACGGGCACCTGGCACACATCTTCAGACATGCGGCCAAGGAGCTGTTCAACGA  425

Query 1077  GGATGTGGAGGAGGTCACTTACCGAGCCCTGAGAAACAAAGACTTCCAAGAGGTCACCCTTGAGAAGAACGGAG  1150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  426  GGATGTGGAGGAGGTCACTTACCGAGCCCTGAGAAACAAAGACTTCCAAGAGGTCACCCTTGAGAAGAACGGAG  499

Query 1151  AGGTGGTGTTACGCTTTGCTGCAGCCTATGGCTTTCGAAACATCCAGAACATGATCCTGAAGCTTAAGAAGGGC  1224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  500  AGGTGGTGTTACGCTTTGCTGCAGCCTATGGCTTTCGAAACATCCAGAACATGATCCTGAAGCTTAAGAAGGGC  573

Query 1225  AAGTTCCCATTCCACTTTGTGGAGGTCCTCGCCTGTGCTGGAGGATGCTTAAATGGCAGAGGCCAAGCCCAGAC  1298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  574  AAGTTCCCATTCCACTTTGTGGAGGTCCTCGCCTGTGCTGGAGGATGCTTAAATGGCAGAGGCCAAGCCCAGAC  647

Query 1299  TCCAGACGGACATGCGGATAAGGCCCTGCTGCGGCAGATGGAAGGCATTTACGCTGACATCCCTGTGCGGCGTC  1372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  648  TCCAGACGGACATGCGGATAAGGCCCTGCTGCGGCAGATGGAAGGCATTTACGCTGACATCCCTGTGCGGCGTC  721

Query 1373  CGGAGTCCAGTGCACACGTGCAGGAGCTGTACCAGGAGTGGCTGGAGGGGATCAACTCCCCCAAGGCCCAAGAG  1446
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  722  CGGAGTCCAGTGCACACGTGCAGGAGCTGTACCAGGAGTGGCTGGAGGGGATCAACTCCCCCAAGGCCCGAGAG  795

Query 1447  GTGCTGCATACCACGTACCAGAGCCAGGAGCGTGGCACACACAGCCTGGACATCAAGTGG  1506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  796  GTGCTGCATACCACGTACCAGAGCCAGGAGCGTGGCACACACAGCCTGGACATCAAGTGG  855