Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08087
Subject:
XR_001755170.2
Aligned Length:
2289
Identities:
518
Gaps:
1720

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTGCAGTGGCAGGAACTTGGCTCACTGCAACCTCCGCTTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGAGTAGCTGGGATTACAGGCGCACGTCACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAGGCGTGAGCCACCGTGCCCGGCCGGGAGGTCACTTTAAGGAGGGCTGTCCAACTGCAAGGAGCCGCAAGCA  296

Query    1  ------------------------------------------------------------------ATGAATCC  8
                                                                              ||||||||
Sbjct  297  GGAAGTGAAACCACAGCACTTCAAAAAAAGAGGGAGACTGGGACAAGCGTATCTAAGAGGCTGAACATGAATCC  370

Query    9  ACAGATCAGAAACCCGATGAAGGCAATGTATCCAGGCACATTCTACTTCCAATTTAAAAAC-----------CT  71
            ||||||||||||.||||||.||...|||||||.||.||||||||||..|.|.|||.|||||           ||
Sbjct  371  ACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACCCATCCTCT  444

Query   72  ATGG-------------------------GAAGCCAA-------------CGATC-----------GGGAC---  93
            ||||                         ||||..||             ||.||           |||||   
Sbjct  445  ATGGTCGGAGCTACACTTGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTTTGGGACACA  518

Query   94  --------------------------------------------------------------------------  93
                                                                                      
Sbjct  519  GGGGTCTTTCGAGGCCCGGTACTACCCAAACGTCAGTCGAATCACAGGCAGGAGGTGTATTTCCGGTTTGAGAA  592

Query   94  -------GAAA------------CTTGG--CTGTG--------CT-----------------------TCACC-  114
                   ||||            |||||  |||||        ||                       ||||| 
Sbjct  593  CCACGCAGAAATGTGCTTCTTATCTTGGTTCTGTGGCAACCGACTGCCTGCTAACAGGCGCTTCCAGATCACCT  666

Query  115  ------------------------------GTG----GAAGGT------AT-----------------AAAG--  129
                                          |||    ||||||      ||                 ||.|  
Sbjct  667  GGTTTGTATCATGGAACCCCTGCCTGCCCTGTGTGGTGAAGGTGACCAAATTCTTGGCTGAGCACCCCAATGTC  740

Query  130  ---------------------CGCCGCT-----------------------CAGT---TGTCTCCT--------  148
                                 ||||.||                       |.||   || |||||        
Sbjct  741  ACCCTGACCATCTCTGCCGCCCGCCTCTACTACTACCGGGATAGAGATTGGCGGTGGGTG-CTCCTCAGGCTGC  813

Query  149  ----------------------------------GGAAGAC-------------GGG-----------------  158
                                              .||||||             |||                 
Sbjct  814  ATAAGGCAGGGGCCCGTGTGAAGATCATGGACTATGAAGACTTTGCATACTGCTGGGAAAACTTTGTGTGCAAT  887

Query  159  ---CGTC-----TTC------------------------------------------------CGAAA------  170
               .|||     |||                                                |.|||      
Sbjct  888  GAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATCCCTGCACCGCACGCTAAAGGAGAT  961

Query  171  --CCAGGTGGATTCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGCGACGACATACTGTC  242
              .|||||||||.||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  962  TCTCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTCTCTTGGTTCTGTGACGACATACTGTC  1035

Query  243  TCCTAACACAAAGTACCAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGACTGTGCAGGGGAGGTGGCCG  316
            ||||||||||||.|||.|||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1036  TCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTGCCCAGAGTGTGCAGGGGAGGTGGCCG  1109

Query  317  AGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTACTACTTCCAGTATCCATGT  390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||..|.||.||..|
Sbjct 1110  AGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCCGCCTCTGCTACTTCTGGGATACAGAT  1183

Query  391  TACCAGGAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGTCGCTGTGGAGATCATGGACTATGAAGATTTTAAATA  464
            |||||||||||||||.|||||||||||||||||||||.|.|.|||.|||||||||.|||..||||||||..||.
Sbjct 1184  TACCAGGAGGGGCTCTGCAGCCTGAGTCAGGAAGGGGCCTCCGTGAAGATCATGGGCTACAAAGATTTTGTATC  1257

Query  465  TTGTTGGGAAAACTTTGTGTACAATGATAATGAGCCATTCAAGCCTTGGAAGGGATTAAAAACCAACTTTCGAC  538
            |||||||.|||||||||||||||.||||.||||||||||||||||||||||||||.||.|||||||||||||||
Sbjct 1258  TTGTTGGAAAAACTTTGTGTACAGTGATGATGAGCCATTCAAGCCTTGGAAGGGACTACAAACCAACTTTCGAC  1331

Query  539  TTCTGAAAAGAAGGCTACGGGAGAGTCTCCAG------------------------------------------  570
            ||||||||||||||||||||||||.|||||||                                          
Sbjct 1332  TTCTGAAAAGAAGGCTACGGGAGATTCTCCAGTGAGGGGTCTCCCTGGGCCTCATGGTCTGTCTCTTCTAGCCT  1405

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1406  CCTGCTCATGCTGCACGGGCCTCCCCTCCATCCTGCACCAGCTGTGCTTTTGCCTGGTCATCCTGAGCCCCTCC  1479

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1480  TGGCCTCAGGGCCATTCCATAGTGCCCCCCTGCCTCACCACCTCCTCCCCGCTCTCCCAGGCTCTTCTTGTAGA  1553

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1554  GGCTCTCCATCCACCTCCCCAGTCCTGTTCCCCCAGCCTGGGTGCCCCTAACTTGACTCTTCCCATCTCCCCAG  1627

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1628  CATAACCAAATCTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTGTCGCCCAGACTAGAGTGCAAT  1701

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1702  GGCTGGATCTCAGCTCACTGCAAACTCTGCTTACTGGGTTCAAGTGATTCTCCTGTCTCAGCTTCTGAGTAGCT  1775

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1776  GGGATTACAGATGCCTGCCACCACGCCCAGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTTAGTAG  1849

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1850  TGACTGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCCATCTCTGTCTCC  1923

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1924  CAAAGTGCTGGGATTACGGGCGTGAGCCACCCGGCTCGGCCGCACAACCAAATCTTATTAAACTCAATCTAGTC  1997

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 1998  TGGCCCTGGTGACTCACGCCTTTCGGAGGCAGAGGTGGGAGAATCGCTTGAGCCCAGAAGTTTGAGACCAGCCT  2071

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2072  GGGCCACACGACAAAGCCCCATTTCTACAAAAAAAAATACCAAAAAAAAGCCAGATGTGGTGGCATGCACCTGT  2145

Query  571  --------------------------------------------------------------------------  570
                                                                                      
Sbjct 2146  AGTTTAAGCTACTTGGGAGGATGAAGTGGGAGGACTGCTTGAGCCGGGGAGGTGGAGGCTGGAGTAAACTGAGA  2219

Query  571  ---------------------------------------------------------------------  570
                                                                                 
Sbjct 2220  TCGCGCCACAGAACTCCAGTTTGAGCAACAGATCAAGACCCTGCCTGAAAATAAATCAATAAATACACT  2288

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