Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08111
- Subject:
- NR_102347.2
- Aligned Length:
- 4096
- Identities:
- 376
- Gaps:
- 3698
Alignment
Query 1 ----------------------------------------------ATGGAGGCGGTGGAGTTCGTCTTCTCTC 28
|||||||||||||.||||||||||||||
Sbjct 1 ATCCGAGCGGGTTTGACGGAAGGAGCGGCGGCGACGGAGGAGGAGGATGGAGGCGGTGGTGTTCGTCTTCTCTC 74
Query 29 TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCATAATTACATTGTCTGATTTAGAATGTGATTAC 102
|||||||||||||||||||||||||||||||||||||||||.|| .|.|||.|||| .|.|.|.||...|
Sbjct 75 TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCGTA---TCCTTGCCTGA---GGCAGGCGAACGC 142
Query 103 ATTAATGCTAGATCATGTTGCTCAAAATTAAACAAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCAC 176
.||...|...|| ||.| ||| .|.|||||||||||||||||||||||||||||||||||||||
Sbjct 143 CTTGCCGGGGGA-CACG--GCT----------GAGGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCAC 203
Query 177 TGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATC 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 204 TGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATC 277
Query 251 GATACATTATGGTGCCGAGTGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAG 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 278 GATACATTATGGTGCCGAGTGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAG 351
Query 325 TCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGAT 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 TCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGAT 425
Query 399 CTTAGCTTTGATAAATGAC------------------------------------------------------- 417
|||||||||||||||||||
Sbjct 426 CTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGG 499
Query 418 -------------------------------------------------------------------------- 417
Sbjct 500 AGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACT 573
Query 418 -------------------------------------------------------------------------- 417
Sbjct 574 ATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAA 647
Query 418 -------------------------------------------------------------------------- 417
Sbjct 648 CTTTAGCCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGA 721
Query 418 -------------------------------------------------------------------------- 417
Sbjct 722 ACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAG 795
Query 418 -------------------------------------------------------------------------- 417
Sbjct 796 CGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGA 869
Query 418 -------------------------------------------------------------------------- 417
Sbjct 870 AAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAA 943
Query 418 -------------------------------------------------------------------------- 417
Sbjct 944 AAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAAC 1017
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1018 CTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCAT 1091
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1092 TTAAAAGCTACTACCTCCACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGT 1165
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1166 ATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCA 1239
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1240 GATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAAC 1313
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1314 ACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATA 1387
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1388 TACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTC 1461
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1462 TGTTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCT 1535
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1536 ATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGT 1609
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1610 TGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTT 1683
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1684 GACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAG 1757
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1758 GCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGC 1831
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1832 CTCTTTGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGT 1905
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1906 AACAGACATTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTC 1979
Query 418 -------------------------------------------------------------------------- 417
Sbjct 1980 CCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCT 2053
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2054 GTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTT 2127
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2128 TGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTT 2201
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2202 CTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATTTT 2275
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2276 TGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGC 2349
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2350 CTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACC 2423
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2424 AAAATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGG 2497
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2498 GCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTC 2571
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2572 AAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCA 2645
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2646 AAGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCG 2719
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2720 CCCAAGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGC 2793
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2794 CTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTT 2867
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2868 GCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGG 2941
Query 418 -------------------------------------------------------------------------- 417
Sbjct 2942 ATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGG 3015
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3016 GATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGT 3089
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3090 TGTAGAGGACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAG 3163
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3164 GGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAA 3237
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3238 TGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGG 3311
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3312 GTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAAT 3385
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3386 GCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGG 3459
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3460 TGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATG 3533
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3534 CTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGG 3607
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3608 CCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTT 3681
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3682 CTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATC 3755
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3756 CAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGT 3829
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3830 AGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTT 3903
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3904 ACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAG 3977
Query 418 -------------------------------------------------------------------------- 417
Sbjct 3978 AATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAAT 4051
Query 418 -------------------------- 417
Sbjct 4052 AAATGATTGTTGAGTGAATAAGTAAA 4077
