Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08111
Subject:
NR_102347.2
Aligned Length:
4096
Identities:
376
Gaps:
3698

Alignment

Query    1  ----------------------------------------------ATGGAGGCGGTGGAGTTCGTCTTCTCTC  28
                                                          |||||||||||||.||||||||||||||
Sbjct    1  ATCCGAGCGGGTTTGACGGAAGGAGCGGCGGCGACGGAGGAGGAGGATGGAGGCGGTGGTGTTCGTCTTCTCTC  74

Query   29  TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCATAATTACATTGTCTGATTTAGAATGTGATTAC  102
            |||||||||||||||||||||||||||||||||||||||||.||   .|.|||.||||   .|.|.|.||...|
Sbjct   75  TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCGTA---TCCTTGCCTGA---GGCAGGCGAACGC  142

Query  103  ATTAATGCTAGATCATGTTGCTCAAAATTAAACAAGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCAC  176
            .||...|...|| ||.|  |||          .|.|||||||||||||||||||||||||||||||||||||||
Sbjct  143  CTTGCCGGGGGA-CACG--GCT----------GAGGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCAC  203

Query  177  TGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATC  250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  204  TGTATTACTGCTCATGTCATTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATC  277

Query  251  GATACATTATGGTGCCGAGTGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAG  324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  278  GATACATTATGGTGCCGAGTGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAG  351

Query  325  TCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGAT  398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  352  TCACACATGAAAGAAGCCATGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGAT  425

Query  399  CTTAGCTTTGATAAATGAC-------------------------------------------------------  417
            |||||||||||||||||||                                                       
Sbjct  426  CTTAGCTTTGATAAATGACTGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGG  499

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  500  AGCCAGAGACTTCTTAAATCATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACT  573

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  574  ATTTTTGCTGTATTTTTACCATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAA  647

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  648  CTTTAGCCTGAACGCCAACACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGA  721

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  722  ACAGGACTGCCATCCCAGCTTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAG  795

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  796  CGAGCAAAGGTGCCCTTCAGGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGA  869

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  870  AAAATTACCCTTTTTGCTTGTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAA  943

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct  944  AAGTCTTTTCACAAGAATGTCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAAC  1017

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1018  CTTATAAGCCATTTTCCCCAGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCAT  1091

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1092  TTAAAAGCTACTACCTCCACAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGT  1165

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1166  ATTGCAGTTATTCCAATTGTATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCA  1239

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1240  GATTAGAAGCAGGAATAGTTATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAAC  1313

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1314  ACTTCTATCCCTCTGCACTGACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATA  1387

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1388  TACAACCAAACTCTGTTCCTTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTC  1461

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1462  TGTTTGCCAGCTCTTACAGGGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCT  1535

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1536  ATCTTAAGCACTGGCATTTGGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGT  1609

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1610  TGAGATAGAATTGGGTGGCTAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTT  1683

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1684  GACCAGGTCTAGCCTTGGCAGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAG  1757

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1758  GCTGGAAGTAGTGCCCTGGCAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGC  1831

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1832  CTCTTTGGGGTCACAGAAATTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGT  1905

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1906  AACAGACATTACTTTGCTTGCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTC  1979

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 1980  CCTTCACTCTGCCTTTCCTCCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCT  2053

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2054  GTTGGAGAACTTAAATCCTTGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTT  2127

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2128  TGAGATGGGGTCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTGCTTT  2201

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2202  CTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACGGCTAGCTACTCCTGGCTAATTTT  2275

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2276  TGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGC  2349

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2350  CTGCCTTGGTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACC  2423

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2424  AAAATGTTTCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGG  2497

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2498  GCTGTCAGTTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTC  2571

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2572  AAAGCTCCTTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCA  2645

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2646  AAGCCAGGAAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCG  2719

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2720  CCCAAGCTGGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGC  2793

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2794  CTCAGCTTCCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTT  2867

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2868  GCTATGTTGCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGG  2941

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 2942  ATTACTGGTGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGG  3015

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3016  GATAAAAGCACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGT  3089

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3090  TGTAGAGGACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAG  3163

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3164  GGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAA  3237

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3238  TGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGG  3311

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3312  GTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAAT  3385

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3386  GCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGG  3459

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3460  TGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATG  3533

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3534  CTGAGGCTTAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGG  3607

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3608  CCCGGTCCATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTT  3681

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3682  CTATCCTTTCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATC  3755

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3756  CAAGATGCAGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGT  3829

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3830  AGGACAAAACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTT  3903

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3904  ACCACATTCTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAG  3977

Query  418  --------------------------------------------------------------------------  417
                                                                                      
Sbjct 3978  AATATGCCCATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAAT  4051

Query  418  --------------------------  417
                                      
Sbjct 4052  AAATGATTGTTGAGTGAATAAGTAAA  4077

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