Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08154
- Subject:
- NM_001113421.1
- Aligned Length:
- 1456
- Identities:
- 664
- Gaps:
- 728
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGAGGTCTGAGCAGCGCGTAAGGGCCGCGTGGGACTGCGACCCAGGCAAGCAAGCTGACAGAGATTACCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGGATGGGATGGATCTAGGCAGTGACGCCGGCAGCAGCAGCAGCAGCCGCGCCAGCTCACAATCCAACTCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAAAGTGACCCCTTGCTCCGAGTGCAAATCCTCATCGTCGCCGGGGGGTAGCTTGGACTTGGTGTCTGCTCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAGACTATGAAGAGCCCTTCCCGGTCTACCAGAAGAAGGTGATTGATGAGTGGGCTCCGGAGGAGGACGGGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGGAGGAAGAGGAGGACGATCGAGGGTATCGGGATGACGGCTGTCCGGCCCGGGAGCCGGGGGACGTGAGCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCAGGATCGGCAGCAGCGGCAGCGGGAGCAGGAGCGCCGCCACCACCATGCCGTCCCCGATGCCTAACGGCAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCCATCCGCACGACCCTCAAGACCTCAGGCACAATGGCAACGTGGTGGTAGCTGGCCGGCCGAACGCCTCTCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTTCCCCGGCGACCCATCCAGAAGACCCAGCCTCCAGGGAGCCGGCGCGGAGGCCGAAACCGGGCATCTGGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCTCTGCCTTCAGCCACCGGACGGCGGGACGCGGGTCCCGGAAGAACCCCCTGCGCCCCCAATGGACTGGGAG 666
Query 1 -------------------------------------------ATGGT---ACATCAGGAT------------A 16
| ||| |.|.||||.| |
Sbjct 667 GCATTGGAAAAGCATCTGGCCGGGCTGCAGTTCCGGGAGCAGGA-GGTGCGAAACCAGGGTCAGGCGAGGACCA 739
Query 17 ACTGCTCGTATCAGGCACAGAAAAATGAGAGAGAGTCTATCAGACAGAAGTTGGCACTTGGAAGCTTCTTTGAT 90
|||.|.|.|.| ||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||.
Sbjct 740 ACTCCACCTCT---GCACAGAAGAATGAGAGAGAGTCTATCAGACAGAAGTTGGCACTCGGAAGCTTCTTTGAC 810
Query 91 GATGGCCCAGGAATTTATACCAGCTGTAGCAAAAGTGGGAAGCCAAGCCTTTCCTCCCGACTGCAGAGTGGGAT 164
||||||||||||||.|||||||||||.||||||||||||||||||||||||||..|..||||.|||||.|||||
Sbjct 811 GATGGCCCAGGAATCTATACCAGCTGCAGCAAAAGTGGGAAGCCAAGCCTTTCTGCAAGACTACAGAGCGGGAT 884
Query 165 GAACTTGCAGATATGCTTTGTCAACGACAGTGGCAGTGATAAGGACAGTGATGCTGATGACAGTAAGACTGAAA 238
||||.|.|||||||||||||||||.|||||.||||||||.||||||||.|||||.||||||||||||||.||||
Sbjct 885 GAACCTCCAGATATGCTTTGTCAATGACAGCGGCAGTGACAAGGACAGCGATGCAGATGACAGTAAGACGGAAA 958
Query 239 CCAGCTTGGACACCCCCTTGTCTCCCATGAGCAAACAGAGTTCTTCCTATTCTGATAGAGACACTACTGAAGAG 312
|||||||||||||.||||||||.|||||||||||.|||||||||||||||||.|||||||||||.|||||.|||
Sbjct 959 CCAGCTTGGACACGCCCTTGTCCCCCATGAGCAAGCAGAGTTCTTCCTATTCGGATAGAGACACAACTGAGGAG 1032
Query 313 GAGTCTGAATCCTTGGATGACATGGACTTCCTTACAAGGCAAAAGAAATTGCAAGCTGAAGCCAAAATGGCCCT 386
||||||||||||.|||||||||||||||||||.||||||||||||||..|.||||||||||||||||||||.||
Sbjct 1033 GAGTCTGAATCCCTGGATGACATGGACTTCCTCACAAGGCAAAAGAAGCTACAAGCTGAAGCCAAAATGGCTCT 1106
Query 387 TGCCATGGCCAAACCAATGGCCAAAATGCAAGTAGAAGTGGAGAAACAGAACAGGAAAAAGTCTCCCGTCGCTG 460
.|||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 1107 GGCCATGGCCAAACCAATGGCCAAAATGCAAGTAGAAGTGGAAAAACAGAACAGGAAAAAGTCTCCCGTCGCTG 1180
Query 461 ATCTTCTGCCACACATGCCTCATATAAGTGAATGCTTGATGAAAAGAAGTTTAAAACCCACCGACCTGAGAGAC 534
|||||||.||||||||||||||.|||||.|||||.||||||||||||||.|||||.||||||||||||||||||
Sbjct 1181 ATCTTCTCCCACACATGCCTCACATAAGCGAATGTTTGATGAAAAGAAGCTTAAAGCCCACCGACCTGAGAGAC 1254
Query 535 ATGACTATTGGGCAGCTACAAGTGATAGTCAATGATCTCCATTCCCAGATAGAAAGCTTGAATGAAGAGTTGGT 608
||||||||.|||||||||||||||||.||||||||.|||||.||||||||.|||||.|||||||||||||||||
Sbjct 1255 ATGACTATCGGGCAGCTACAAGTGATCGTCAATGACCTCCACTCCCAGATTGAAAGTTTGAATGAAGAGTTGGT 1328
Query 609 CCAGCTGCTTCTCATCCGAGATGAGCTGCACACAGAGCAGGATGCCATGCTGGTGGACATTGAAGACTTGACCA 682
|||||||||.||.||.||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.|
Sbjct 1329 CCAGCTGCTCCTTATTCGAGATGAGCTGCACACAGAACAAGATGCCATGCTGGTGGACATTGAAGACTTGACTA 1402
Query 683 GACATGCTGAAAGTCAGCAGAAGCACATGGTAGAGAAAATGCCTGCAAAG 732
||||.|||||.|||||||||||||||||||..|||||||||||.||.|||
Sbjct 1403 GACACGCTGAGAGTCAGCAGAAGCACATGGCTGAGAAAATGCCCGCGAAG 1452