Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08154
- Subject:
- NM_001197113.1
- Aligned Length:
- 1693
- Identities:
- 719
- Gaps:
- 965
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGTCTGGAAGAACTGAAAAGATTGCAGAATCCTCTAGAACAAGTTAATGATGGAAAATATTCATTTGAAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCACCAGCTGGCCATGGATGCAGAGAATAATATTGAAAAGTATCCCCTCAATCTACAGCCCTTGGAATCAAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAAAATCATTCAGCGAGCATGGCGAGAGTACCTGCAGCGGCAGGAGCCCCTGGGGAAGAGGAGCCCGTCCCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCTCTGTCTCCTCAGAGAAGCTGAGCAGCTCTGTCAGCATGAACACCTTCTCCGACAGCAGCACACCCGATTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGAGAGGATGGGATGGATCTAGGCAGTGACGCCGGCAGCAGCAGCAGCAGCAGCCGCGCCAGTTCACAGTCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTCCACCAAAGTGACCCCTTGCTCCGAGTGCAAATCTTCATCGTCGCCGGGGGGCAGCCTGGACTTGGTGTCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCCTGGAGGACTATGAGGAGCCCTTCCCGGTCTACCAGAAGAAGGTGATTGATGAGTGGGCGCCGGAGGAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGGGGAGGAGGAGGAAGAGGAGGACGAGCGCGACCAGCGAGGGTACCGGGATGACCGCTCTCCGGCCCGGGAAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGGGGGACGTAAGCGCCAGGACCCGCAGCGGCGGCGGCGGGGGCAGGAGCGCCACCACCGCCATGCCGCCCCCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTGCCCAACGGCAACCTCCACCAGCACGACCCCCAGGACCTCAGGCACAATGGCAACGTGGTGGTGGCTGGCCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCGAGCTGTTCCCGGGGCCCCCGCCGGGCGATCCAAAAGCCCCAGCCGGCTGGGGGCCGGCGCAGTGGCCGCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCCGGCGGCTGGGGGGCTCTGCCTTCAGCCCCCAGACGGCGGGACGTGCGTCCCCGAAGAGCCCCCGGTGCCA 888
Query 1 ----------------------------------------------------------ATGGTAC---ATCAGG 13
| ||||| |.||||
Sbjct 889 CCTATGGATTGGGAGGCGCTGGAGAAGCATCTGGCCGGGCTGCAGTTCCGGGAGCAGGA-GGTACGGAACCAGG 961
Query 14 ------------ATAACTGCTCGTATCAGGCACAGAAAAATGAGAGAGAGTCTATCAGACAGAAGTTGGCACTT 75
..||||.|.|.| ..|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 GCCAGGCGAGGACCAACTCCACCT---CCGCACAGAAAAATGAGAGAGAGTCTATCAGACAGAAGTTGGCACTT 1032
Query 76 GGAAGCTTCTTTGATGATGGCCCAGGAATTTATACCAGCTGTAGCAAAAGTGGGAAGCCAAGCCTTTCCTCCCG 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 GGAAGCTTCTTTGATGATGGCCCAGGAATTTATACCAGCTGTAGCAAAAGTGGGAAGCCAAGCCTTTCCTCCCG 1106
Query 150 ACTGCAGAGTGGGATGAACTTGCAGATATGCTTTGTCAACGACAGTGGCAGTGATAAGGACAGTGATGCTGATG 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 ACTGCAGAGTGGGATGAACTTGCAGATATGCTTTGTCAACGACAGTGGCAGTGATAAGGACAGTGATGCTGATG 1180
Query 224 ACAGTAAGACTGAAACCAGCTTGGACACCCCCTTGTCTCCCATGAGCAAACAGAGTTCTTCCTATTCTGATAGA 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 ACAGTAAGACTGAAACCAGCTTGGACACCCCCTTGTCTCCCATGAGCAAACAGAGTTCTTCCTATTCTGATAGA 1254
Query 298 GACACTACTGAAGAGGAGTCTGAATCCTTGGATGACATGGACTTCCTTACAAGGCAAAAGAAATTGCAAGCTGA 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 GACACTACTGAAGAGGAGTCTGAATCCTTGGATGACATGGACTTCCTTACAAGGCAAAAGAAATTGCAAGCTGA 1328
Query 372 AGCCAAAATGGCCCTTGCCATGGCCAAACCAATGGCCAAAATGCAAGTAGAAGTGGAGAAACAGAACAGGAAAA 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 AGCCAAAATGGCCCTTGCCATGGCCAAACCAATGGCCAAAATGCAAGTAGAAGTGGAGAAACAGAACAGGAAAA 1402
Query 446 AGTCTCCCGTCGCTGATCTTCTGCCACACATGCCTCATATAAGTGAATGCTTGATGAAAAGAAGTTTAAAACCC 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1403 AGTCTCCCGTCGCTGATCTTCTGCCACACATGCCTCATATAAGTGAATGCTTGATGAAAAGAAGTTTAAAACCC 1476
Query 520 ACCGACCTGAGAGACATGACTATTGGGCAGCTACAAGTGATAGTCAATGATCTCCATTCCCAGATAGAAAGCTT 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1477 ACCGACCTGAGAGACATGACTATTGGGCAGCTACAAGTGATAGTCAATGATCTCCATTCCCAGATAGAAAGCTT 1550
Query 594 GAATGAAGAGTTGGTCCAGCTGCTTCTCATCCGAGATGAGCTGCACACAGAGCAGGATGCCATGCTGGTGGACA 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1551 GAATGAAGAGTTGGTCCAGCTGCTTCTCATCCGAGATGAGCTGCACACAGAGCAGGATGCCATGCTGGTGGACA 1624
Query 668 TTGAAGACTTGACCAGACATGCTGAAAGTCAGCAGAAGCACATGGTAGAGAAAATGCCTGCAAAG 732
|||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1625 TTGAAGACTTGACCAGACATGCTGAAAGTCAGCAGAAGCACATGGCAGAGAAAATGCCTGCAAAG 1689
