Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08157
Subject:
NR_077061.1
Aligned Length:
1709
Identities:
1364
Gaps:
280

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTTCTGGTAGATATTTTTAAGTAACTTGATATAATAGATTAAAATGTATATATTTCAAAAGAGAAAAGGAA  74

Query    1  -------------------------------------ATGGCGGCAGGAGGCAGTGGCGTTGGTGGGAAGCGCA  37
                                                 ||||||||||||||||||||||||||||||||||.||
Sbjct   75  GCAGTAAGAAATAAGATAGAGGAGGGCCTTTGACAAGATGGCGGCAGGAGGCAGTGGCGTTGGTGGGAAGCACA  148

Query   38  GCTCGAAAAGCGATGCCGATTCTGGTTTCCTGGGGCTGCGGCCCACTTCGGTGGACCCAGCGCTGA---GGCGG  108
            ||||||||||||||..|||||||||||||||||||||||||||||.|||||.||||||||||||||   |||||
Sbjct  149  GCTCGAAAAGCGATAACGATTCTGGTTTCCTGGGGCTGCGGCCCATTTCGGCGGACCCAGCGCTGAGGCGGCGG  222

Query  109  CGGCGGCGAGGCCCAAGAAATAAGAAGCGGGGCTGGCGGCGGCTTGCTCAGGAGCCGCTGGGGCTGGAGGTTGA  182
            |||||||||||||||||||||||||||.|||.|||||||.|||||||.||||||||||||||||||||||||||
Sbjct  223  CGGCGGCGAGGCCCAAGAAATAAGAAGTGGGACTGGCGGAGGCTTGCGCAGGAGCCGCTGGGGCTGGAGGTTGA  296

Query  183  CCAGTTCCTGGAAGACGTGCGGCTACAGGAGCGCACGAGCGGTGGCTTGTTGTCAGAGGCCCCAAATGAAAAAC  256
            |||||||||||||||||||||||||||||.|||||.||||||||||||||||..||||||||||||||||||||
Sbjct  297  CCAGTTCCTGGAAGACGTGCGGCTACAGGGGCGCATGAGCGGTGGCTTGTTGAGAGAGGCCCCAAATGAAAAAC  370

Query  257  TCTTCTTCGTGGACACTGGCTCCAAGGAAAAAGGGCTGACAAAGAAGAGAACCAAAGTCCAGAAGAAGTCACTG  330
            ||||||||||||||||.||||||||||||||||||||    |||||||||||||||||||||||||||||||||
Sbjct  371  TCTTCTTCGTGGACACCGGCTCCAAGGAAAAAGGGCT----AAGAAGAGAACCAAAGTCCAGAAGAAGTCACTG  440

Query  331  CTTCTCAAGAAACCCCTTCGGGTTGACCTCATCCTCGAGAACACATCCAAAGTCCCTGCCCCCAAAGACGTCCT  404
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  441  CTTCTCAAGAAACCCCTTCGGGTTGACCTCATCCTCGAG-ACACATCCAAAGTCCCTGCCCCCAAAGACGTCCT  513

Query  405  CGCCCACCAGGTCCCCAACGCCAAGAAGCTCAGGCGGAAGGAGCAGCTATGGGAGAAGCTGGCCAAGCAGGGCG  478
            |||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  514  CGCCCACCAGGTCCCGAACGCCAAGAAGCTCAGGCGGAAGGAGCAGCTATGGGAGAATCTGGCCAAGCAGGGCG  587

Query  479  AGCTGCCCCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCCTTCTGCAACAAGGGCCAAGCCCGGGCCC  552
            |||||||||||||||||||||||||||||||||||||||||||||||.|..||.|..|||||||||||||||||
Sbjct  588  AGCTGCCCCGGGAGGTGCGCAGGGCCCAGGCCCGGCTCCTCAACCCTCCCACAGCCGGGGCCAAGCCCGGGCCC  661

Query  553  CAGGACACCGTAGAGCGGCCCTTCTACGACCTCTGGGCCTCAGACAACCCCCTGGACAGGCCGTTGGTTGGCCA  626
            |||||||||||.|||||||||||||||||.||||||||.||||||||||||||||||.||||.|||.|||||||
Sbjct  662  CAGGACACCGTGGAGCGGCCCTTCTACGAACTCTGGGCATCAGACAACCCCCTGGACTGGCCATTGTTTGGCCA  735

Query  627  GGATGAGTTTTTCCTGGAGCAGACCAAGAAGAAAGGAGTGAAGCGGCCAGCACGCCTGCACACCAAGCCGTCCC  700
            |||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  736  GGATGAGTTTTTCCTGGAGCAGACCAAGAAGAAAGGAGTGAAGCGGCCACCACGCCTGCACACCAAGCCGTCCC  809

Query  701  AGGCGCCCGCCGTGGAGGTGGCGCCTGCCGGAGCTTCCTACAATCCATCCTTTGAAGACCACCAGACCCTGCTC  774
            ||||.||||||||||||||||||||||||||||||||||||||.||.|.|||||||||||||||||||||||||
Sbjct  810  AGGCACCCGCCGTGGAGGTGGCGCCTGCCGGAGCTTCCTACAACCCGTACTTTGAAGACCACCAGACCCTGCTC  883

Query  775  TCAGCGGCCCACGAGGTGGAGTTGCAGCGGCAGAAGGAGGCGGAGAAGCTGGAGCGGCAGCTGGCCCTGCCCGC  848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  884  TCAGCGGCCCACGAGGTGGAGTTGCAGCGGCAGAAGGAGGCGGAGAAGCTGGAGCGGCAGCTGGCCCTGCCCGC  957

Query  849  CACGGAGCAGGCCGCCACCCAGGAGTCCACATTCCAGG-AGCTGTGCGAGGGGCTGCTGGAGGAGTCGGATGGT  921
            |||.||||||||||||||||||||||||||.||||||| |||.||||||||||||||||||||||||.||.|||
Sbjct  958  CACAGAGCAGGCCGCCACCCAGGAGTCCACGTTCCAGGTAGCCGTGCGAGGGGCTGCTGGAGGAGTCAGAGGGT  1031

Query  922  GAGGGGGAGCCAGGCCAGGGCGAGGGGCCGGAGGCTGGGGATGCCGAGGTCTGTCCCACGCCCGCCCGCCTGGC  995
            ..|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1032  CCGGGGGAGCCAGGCCAGGGCGAGGGGCCGGAGGCTGGGGATGCCGAGGTCTGTCCCACGCCCACCCGCCTGGC  1105

Query  996  CACCACAGAGAAGAAGACGGAGCAGCAGCGGCGGCGGGAGAAGGCTGTGCACAGGCTGCGGGTACAGCAGGCCG  1069
            |.|||||||||||.|||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||
Sbjct 1106  CGCCACAGAGAAGGAGACGGAGCAGCAGCGGCGGCGGGAGAAGGCTGCGCGCAGGCTGCGGGTACAGCAGGCCG  1179

Query 1070  CGTTGCGGGCCGC------CCGGCTCCGGCACCAGGAGCTGTTCCGGCTGCGCGGGATCAAGGCCCAGGTGGCC  1137
            ||||||||.|.||      |||||.||||||||.||||.||||||.||||||||||||||||||||||||||||
Sbjct 1180  CGTTGCGGACTGCCAGGCTCCGGCCCCGGCACCGGGAGGTGTTCCTGCTGCGCGGGATCAAGGCCCAGGTGGCC  1253

Query 1138  CTGAGGCTGGCGGAGCTGGCGCGGCGGCGGAGGCGGCGGCAGGCGCGGCGGGAGGCTGAGGCTGACAAGCCCCG  1211
            ||||||||||||||||||||||||||||||||||.|||||||||.||||||.||||.|||||||||||||||||
Sbjct 1254  CTGAGGCTGGCGGAGCTGGCGCGGCGGCGGAGGCAGCGGCAGGCACGGCGGAAGGCCGAGGCTGACAAGCCCCG  1327

Query 1212  AAGGCTGGGACGGCTCAAGTACCAGGCACCTGACATCGACGTGCAGCTGAGCTCGGAGCTGACAGACTCGCTCA  1285
            |||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1328  AAGGCTGGGGCGGCTCAAGTACCAGGCACCTGACATCGACGTGCAGCTGAGCTCGGAGCTGGCAGACTCGCTCA  1401

Query 1286  GGACCCTGAAGCCCGAGGGCAACATCCTTCGAGACCGGTTCAAGAGCTTCCAGAGGAGGAATATGATCGAGCCT  1359
            ||||||||||||||||||||.||||||||||||.||||||||||||||||||||||||||||||||||.|||||
Sbjct 1402  GGACCCTGAAGCCCGAGGGCGACATCCTTCGAGGCCGGTTCAAGAGCTTCCAGAGGAGGAATATGATCCAGCCT  1475

Query 1360  CGAGAGAGAGCCAAGTTCAAACGCAAGTACAAGGTGAAGCTGGTGGAGAAGCGGGCGTTCCGTGAGATCCAGTT  1433
            |||.||||||||||||||||||.||.|||||||||||||||||.||||||||||||||||||.|||||||||||
Sbjct 1476  CGACAGAGAGCCAAGTTCAAACCCAGGTACAAGGTGAAGCTGGGGGAGAAGCGGGCGTTCCGCGAGATCCAGTT  1549

Query 1434  G-------------------------------------------------------------------------  1434
            |                                                                         
Sbjct 1550  GTAGCTCCCATCAGAGGCCGGAGCCTCGCCTTTCAATAAAAAGTCCCTTCTAGCTAAAAAAAAAAAAAAAAAAA  1623

Query 1435  --------------------------------------------------------------------------  1434
                                                                                      
Sbjct 1624  AAGAGGAGGAAGAATTGCAAATAAAATGGCAGGCATAGTTCTAAGTGCTTTACATATGTATTCACAGTAAACCT  1697

Query 1435  -------  1434
                   
Sbjct 1698  TCGAAAA  1704

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