Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08191
- Subject:
- NR_147854.1
- Aligned Length:
- 3378
- Identities:
- 709
- Gaps:
- 2666
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGCCGCAGCGCGCATTTGGGCTCCGAGGAAGTTGACCGAGGCGGCTGCCGCAGGATCCCGGGCCCGGATCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACGAAGCCCGCGCGGCCGTCTCCTCCGCGCGCCACCCCTGCGCCTCCCGCGAGCTCCACTTCCCATCTGCTATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTTTCCGATTGTTTTCCGGTGGCGAGCCCGGCTCCGAAACTTACAAAGTGTTGGATGTCCCCCGTTCGAACTGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACTGCAGACCGCCTCTGGGTAGCTGGATGAAGCCCACCCCGTCCCCTTCTGGTACCAAAGTGCTTACTCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCAAAGTGCCGTGTCTGAACTGCCGCTGGGAAGAAGCGGCTCCTGAGACGCGCCCACACCTTTCACCTGCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCGCTTCCCCCTCCTCGGCCACCTTCCCGGCGGAAGCAGCGAGGAGGGAGCCCCCTTTGGCCGTCCTCCGTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACCGGTTTTCCGAGGCTGGCAAAAGCCGAGGCTGGATTTGGGGGAGGAATATTAGACTCGGAGGAGTCTGCGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTTTTCTCCTCCCCGCGCCTCCCGGTCGCCGCGGGTTCACCGCTCAGTCCCCGCGCTCGCTCCGCACCCCACC 592
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 593 CACTTCCTGTGCTCGCCCGGGGGGCGTGTGCCGTGCGGCTGCCGGAGTTCGGGGAAGTTGTGGCTGTCGAGAAT 666
Query 3 GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGGGGTCTGTGGGTACCTGTTCCTGCCCTGGAAGTGCCTCGTGGTCGTGTCTCTCAGGCTGCTGTTCCTTGTAC 740
Query 77 CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCAGGGG 814
Query 151 GAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCATCCT 224
|||||||||||||||
Sbjct 815 GAGAGCGCCACCCTC----------------------------------------------------------- 829
Query 225 CTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTACAGCA 298
Sbjct 830 -------------------------------------------------------------------------- 829
Query 299 TCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCCAAAG 372
Sbjct 830 -------------------------------------------------------------------------- 829
Query 373 ACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA 446
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 830 --------------------------AGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTAATGA 877
Query 447 AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 AGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATCTCTC 951
Query 521 CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCCGGGAGCAGTCAGGGGAC 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 952 CCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCAGGGAGCAGTCAGGGGAC 1025
Query 595 TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 TACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATCCACC 1099
Query 669 ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100 ATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCAGCAG 1173
Query 743 TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAAGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAA 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174 TCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAAGACTGATTGAAGGAAAGAAAGGGGTGAAAGTGGAA 1247
Query 817 AACAGACCTTTCCTCTCAAAACTCATCTTCTTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGC 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248 AACAGACCTTTCCTCTCAAAACTCATCTTCTTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCGTGGC 1321
Query 891 CTCCAACAAGCTGGGCCACACCAATGCCAGCATCATGCTATTTGGT---------------GAGACTGTGCTC- 948
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||..|
Sbjct 1322 CTCCAACAAGCTGGGCCACACCAATGCCAGCATCATGCTATTTGGTCCAGGCGCCGTCAGCGAG---GTGAGCA 1392
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1393 ACGGCACGTCGAGGAGGGCAGGCTGCGTCTGGCTGCTGCCTCTTCTGGTCTTGCACCTGCTTCTCAAATTTTGA 1466
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1467 TGTGAGTGCCACTTCCCCACCCGGGAAAGGCTGCCGCCACCACCACCACCAACACAACAGCAATGGCAACACCG 1540
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1541 ACAGCAACCAATCAGATATATACAAATGAAATTAGAAGAAACACAGCCTCATGGGACAGAAATTTGAGGGAGGG 1614
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1615 GAACAAAGAATACTTTGGGGGGAAAAAAGTTTTAAAAAAGAAATTGAAAATTGCCTTGCAGATATTTAGGTACA 1688
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1689 ATGGAGTTTTCTTTTCCCAAACGGGAAGAACACAGCACACCCGGCTTGGACCCACTGCAAGCTGCATCGTGCAA 1762
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1763 CCTCTTTGGTGCCAGTGTGGGCAAGGGCTCAGCCTCTCTGCCCACAGAGTGCCCCCACGTGGAACATTCTGGAG 1836
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1837 CTGGCCATCCCAAATTCAATCAGTCCATAGAGACGAACAGAATGAGACCTTCCGGCCCAAGCGTGGCGCTGCGG 1910
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1911 GCACTTTGGTAGACTGTGCCACCACGGCGTGTGTTGTGAAACGTGAAATAAAAAGAGCAAGAAAGAAAAAGGAA 1984
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1985 ACAAAATAAGACCGTCTGACAGCAACAACGGTCCCACAAACAAGTCACAAAAGATACCGTTAAACTTTTTTTTT 2058
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2059 TTTTTATCATTTTACTACATGAACATCATGGATAACAAGGGATTCTGATTCATTATTAATTTCATTAATTATAT 2132
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2133 TTTCTGATATGAGTCTAGAACTTACTGCAAAAACAAGACAAAACTAAAAAAATACAACTGAGAAGGGTGAAGAG 2206
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2207 AAGTATGTTTGTTAAACAGTAAAAATGAATAGTATACTTCTTAACTAGGTTTACAACTGGTGGACCACACACCA 2280
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2281 GGCACTAATCACCTGGTGAGGATTTGGCATATCCACCAAAAAATGCATCCGATTTAACCAACATCTCCACCAGC 2354
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2355 GCTACGGACTCCTCCCAATTCTGACATCTCTTGCAGACAATACTATGCTCTCTACACACTGTTTAGAAATGGAA 2428
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2429 AGGTGATCTGCACTGTATCTTGGGTTTGTTGGCTATGCTTCCTTTGATGACATATATTATACAGTATATATATA 2502
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2503 CATATATTTTTTTTGTTAGAGTTCTAGCCATTTTATTTCTCCGCAGGGTCCTTTCTCAGACATTACTGCATGCT 2576
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2577 GTATATGGCGTTAGCTGTGTGTTGATCTTCTAAAAGATGATAGAGTTTACTGGTAATTGTGTAATCAGCTCCTG 2650
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2651 CCTTTTTATTTTCTTGGGTTATTTACATGTCAGAGACATTTATAAAAAGTGAAAGGATAAAAAAAAAAAAAAAC 2724
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2725 AACTAATACCGGGCGCAGCATCTTTCCAGGTGTGGCTCTGCGCTAGGCCACCCCAGGTGGCCCCGCTTTCTCCA 2798
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2799 TTCTGCCCTGTGGCGTTAACAGACAGCAAGCAGCTGAACAAGCAGTACCGTCAGTACCCACTTGCTTTAGCCCA 2872
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2873 TTATGGGAATCTCTGATGCCTTTGTGACCACTGGAGAGTTTAATCCTCTTGGTTTATTTTATTTCCCACCTTTG 2946
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2947 TGTGAGTGTGTATGAAAGAGAAGAAAATGCAATTTTTAGGTAATCTTTTTTTTTTTTCCCCTCCCCTGAAAGTC 3020
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3021 TGGGAACCTGAGAGTCCTCGGGGAGGGGTCCTGGATGTGATGAGGGAAAGGGGGATTGGGGGATCCGGGAGGGT 3094
Query 949 ------------------------------------------------ 948
Sbjct 3095 GGGGTTGTCTCTGACTTGACATTAAAAAGTGTTCCATGTCCCTCTTCA 3142
