Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08191
- Subject:
- XR_001747894.2
- Aligned Length:
- 5606
- Identities:
- 908
- Gaps:
- 4679
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCAGGGAATGCCAGGGGGAAAGGGATTTTCTGATACTCAGAAGACTCAGAGACTGTCAGTTTAAAAAATGAAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAATATAGAAGGGGCAAAGTGGCATTTATCATTCTATCTCTCCAGGCTCCTGTCTCTTTAATCAGCTAGCCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTGCCCAGTAAATGATTCCTGAGAGTGTGTGTGCGTGTGTGTGTGTGTGTGTGCCCGCGCGCGTGTGTTGTAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCTGTCAATCCTTGGATTAGAACCAATGATTGCAGCTTGTAGGAGGGCTGTCCAGGGCCAGATTGTACAATGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTCTCAGTGCCAGAGTATGAGTGGAGATAATTACGGAGAAGTCATACTCTCTCACACCCTCGGCTTTCTTGTTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTCCTTCAGCAAAACAGTGGATTTAAATCTCCTTGCACAAGCTTGAGAGCAACACAATCTATCAGGAAAGAAA 444
Query 1 -------------------------------------------------------ATGGGGGTCTGTGGGTACC 19
| ||...|||
Sbjct 445 GAAAGAAAAAAACCGAACCTGACAAAAAAGAAGAAAAAGAAGAAGAAAAAAAATCA----------TGAAAACC 508
Query 20 TGTTCCTGCCCTGGAAGTGC----------CTCGTGGTCGTGTCTCTCA-------GGCTGC----TGTTCCTT 72
.|||.||| ..||.||| |||.|||.| ..||| ||| |||||| |||..|||
Sbjct 509 --ATCCAGCC--AAAAATGCACAATTCTATCTCTTGGGC-AATCT-TCACGGGGCTGGCTGCTCTGTGTCTCTT 576
Query 73 GTACCCACAGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCA 146
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 577 ----CCA-AGGAGTGCCCGTGCGCAGCGGAGATGCCACCTTCCCCAAAGCTATGGACAACGTGACGGTCCGGCA 645
Query 147 GGGGGAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCA 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 646 GGGGGAGAGCGCCACCCTCAGGTGCACTATTGACAACCGGGTCACCCGGGTGGCCTGGCTAAACCGCAGCACCA 719
Query 221 TCCTCTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTAC 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TCCTCTATGCTGGGAATGACAAGTGGTGCCTGGATCCTCGCGTGGTCCTTCTGAGCAACACCCAAACGCAGTAC 793
Query 295 AGCATCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCC 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 794 AGCATCGAGATCCAGAACGTGGATGTGTATGACGAGGGCCCTTACACCTGCTCGGTGCAGACAGACAACCACCC 867
Query 369 AAAGACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTA 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 868 AAAGACCTCTAGGGTCCACCTCATTGTGCAAGTATCTCCCAAAATTGTAGAGATTTCTTCAGATATCTCCATTA 941
Query 443 ATGAAGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATC 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 ATGAAGGGAACAATATTAGCCTCACCTGCATAGCAACTGGTAGACCAGAGCCTACGGTTACTTGGAGACACATC 1015
Query 517 TCTCCCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCCGGGAGCAGTCAGG 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1016 TCTCCCAAAGCGGTTGGCTTTGTGAGTGAAGACGAATACTTGGAAATTCAGGGCATCACCAGGGAGCAGTCAGG 1089
Query 591 GGACTACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATC 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090 GGACTACGAGTGCAGTGCCTCCAATGACGTGGCCGCGCCCGTGGTACGGAGAGTAAAGGTCACCGTGAACTATC 1163
Query 665 CACCATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCA 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164 CACCATACATTTCAGAAGCCAAGGGTACAGGTGTCCCCGTGGGACAAAAGGGGACACTGCAGTGTGAAGCCTCA 1237
Query 739 GCAGTCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAAGACTGATTGAAGGAAAGAAAGGGGTGAAAGT 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238 GCAGTCCCCTCAGCAGAATTCCAGTGGTACAAGGATGACAAAAGACTGATTGAAGGAAAGAAAGGGGTGAAAGT 1311
Query 813 GGAAAACAGACCTTTCCTCTCAAAACTCATCTTCTTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCG 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312 GGAAAACAGACCTTTCCTCTCAAAACTCATCTTCTTCAATGTCTCTGAACATGACTATGGGAACTACACTTGCG 1385
Query 887 TGGCCTCCAACAAGCTGGGCCACACCAATGCCAGCATCATGCTATTTG--GTGAGA---------CTGTGCTC- 948
|||||||||||||||||||||||||||||||||||||||||||||||| ||||.| |||..|.|
Sbjct 1386 TGGCCTCCAACAAGCTGGGCCACACCAATGCCAGCATCATGCTATTTGAAGTGAAAACTACAGCCCTGACCCCT 1459
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1460 TGGAAAGGTTTGTATATTTTTCAGACAGCTGCTGCCTTGGTGGGTGTGGGGTATGTAAAACTCTTCACCTTCCT 1533
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1534 CCCAGATGCCTTCTTTCCTGAGCTAACTCCAGGAAGCAGCGCAGAGGGAACCCTCCCCCAACCTTCAACCATCT 1607
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1608 CCGTGTCAATTTAGATTAACCCCATCCTCAAGGACATCCAATCCTTCCTAGGTAGATCCCACTTGCAGTAGCCT 1681
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1682 AACTTCTCTTTGCTGGTGGCACTAATGAGCACCTGTCAGTGCCCAGAATAGCTCCATCTCTGGGCTACTCTGCA 1755
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1756 CCAGGCCTGCCTCTTTCCTCACACACGGATGCTCTAATGCAGCGATCTTCTCAGACCTTGGCCCTGCATGCTGC 1829
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1830 CCTTGCTTGCACCATTCTTTCTATCTCTCTAACTTGGAGCTGGAAGGGAAGTGGCAAGGGGAGGGGAAGATGGG 1903
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1904 AGGAAGGGGGAGGTTCTTGGGTGAGTCACTTGGCTACGAATAAAATGCATCTTATTTGAAGCTTTCATTCCTGC 1977
Query 949 -------------------------------------------------------------------------- 948
Sbjct 1978 CAGATGTTTCCGATGGATAATTGACACTCATCACCGTTCTCTGGGACCCTAACTGTCCTGGTAATTAGTCTCTT 2051
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2052 TAGGCCTCCGCAGCTCTCTAATGAGATAGAGGCAATAAAGGCATTCACTGTGGAGTGGAGGCGTGGCTGAATGA 2125
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2126 AGAATGGAGGCCTCATCTGCGTGGCCCATGTCACTAGGCAGATGGGCTGAGCTGTAGCTCTGACCAGCACTGGC 2199
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2200 TTTGAGAGGGCCTTGATCCCAGGGTGCTGTGGTCCACGCCCACCTGGACCTAAGGTCTTCATCTCATCTCATGG 2273
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2274 AATCCTTCCACATAGCATTCATTCATTCAGTGTGGGATGGCCTGCGGGAAGCAGCCCAGTGGCACGCCTGCGGT 2347
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2348 TCTCACCTTTTAACCTGTACCCAGGTGGAGCAGGCCATGCAGCCACACTCTCTTCTCTTTATTCTCTGAAGATG 2421
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2422 CATCTCTGAGATAGTGGGAAGATAGTTGCATTTGAAGACAGAAGTCAAGAGACTTGGGAAAGTCACTTAAGCTT 2495
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2496 CCTGAAGTTCAGTTTCCACATGGTAGAAAGGGAGATAATAATTCTCATCTCCTACATGAGTGTCATTAAGGTGT 2569
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2570 TGTGATAGCTTTCCCAGTGCAAGCGCTCTATCTGAAATCCTAACTGACATGGCTTTGCTTCTATGTAGATAGAC 2643
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2644 ACTCAGCCACAGGAATTCTCAGTAAGTTGTATTGGATATAGTTAGAAAAGGGGAGGAAAGGTATTTGGAAGAGG 2717
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2718 AAATTGAGGTAAGGCAGAGGGCAAGGTATGAAAAAAGTTTTTGTTTTATTTTTTCTTCAAGTACAATTTTAAGC 2791
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2792 AAAAGTAAAACACAAAGACAAATAAATGTGGATATGTCAGCATGAGTGGCAATGCCCCCTCCTTCTTTCAACAA 2865
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2866 ACATTGGTTGAATACCTGCCACGGGCCAATGAGATACAGACTCTGCTCTTAAGGAACTTACTGCACAGAGGACA 2939
Query 949 -------------------------------------------------------------------------- 948
Sbjct 2940 GAGGAGGAAATACAAATAAGTTAGGCAAAGAGAATTATGACACAGGGTGGTAAGTATTTTACTAGTGGGATGTG 3013
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3014 TATGGCACTGAGCAAGGCAGGGAAGGCTGCCTGCAAGAGGTGCTGAAGGCTGGAAGAGGAGCTGGAATGAAGAA 3087
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3088 TAAGAGTGATATGGGTGAGACATATTTCGGACGGAGGGGAGAGTGTGTGAGGGTGGGGAAAAAAGACCCGCCCC 3161
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3162 TGTGTGCTCACATGTGGTTATGTGGCAAGGGGCAAGGGCACCAAACTAGGTGTGGCAAGAAGAGACACCAAGGC 3235
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3236 TGCAGACTGCAGGCACATCACGAAATGTAGTGCTCGGTCCACTGAGAAGCTGGACTTGGTGCTAGCCTGTTGGC 3309
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3310 CTCAAATCAATGAGGATCATGATCGATTTGGGGTAGAAACATCACCTTGGAATTCGCATAAAGAATAAATTCCA 3383
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3384 GGGGTCAAGGCCACAGGTGGCAAGGTCCAATTGGTGAACATTTTTGGGAATTGAAAGATGAGATGGTGCAGAGT 3457
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3458 ATCTCCTTTGGGAGGATGTCTCATTTGAGAGAATGCCCCTGCCTCGGGGCTACCCCTGTTTCCTTCTCCTTCTG 3531
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3532 TCCAACTTGGTCCAGGTCTGGTGTCCTGGATGTGCTGCTGAAGAGACAGGTTCCGGGGGTGGTGAGCGCATGTA 3605
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3606 CCTGTGGGGTGGGCTGCGCAGACTGGATATGGTCACATAGTGCCAGCCACTCACCAGCCTGAGATGGAGATGAT 3679
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3680 GATGATGGAGAGCTTCAGAGGGGCTGCTCAGGCTTTTCCCAGATATACTACAAGCAAGAGAATGGCTGGCAGGC 3753
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3754 ACTTGGTGGCCTTTTTCTGTCTTCCATAGGAAGAATTTTCTAACACAACAAACAGGTCCAGGCGCCGTCAGCGA 3827
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3828 GGTGAGCAACGGCACGTCGAGGAGGGCAGGCTGCGTCTGGCTGCTGCCTCTTCTGGTCTTGCACCTGCTTCTCA 3901
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3902 AATTTTGATGTGAGTGCCACTTCCCCACCCGGGAAAGGCTGCCGCCACCACCACCACCAACACAACAGCAATGG 3975
Query 949 -------------------------------------------------------------------------- 948
Sbjct 3976 CAACACCGACAGCAACCAATCAGATATATACAAATGAAATTAGAAGAAACACAGCCTCATGGGACAGAAATTTG 4049
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4050 AGGGAGGGGAACAAAGAATACTTTGGGGGGAAAAAAGTTTTAAAAAAGAAATTGAAAATTGCCTTGCAGATATT 4123
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4124 TAGGTACAATGGAGTTTTCTTTTCCCAAACGGGAAGAACACAGCACACCCGGCTTGGACCCACTGCAAGCTGCA 4197
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4198 TCGTGCAACCTCTTTGGTGCCAGTGTGGGCAAGGGCTCAGCCTCTCTGCCCACAGAGTGCCCCCACGTGGAACA 4271
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4272 TTCTGGAGCTGGCCATCCCAAATTCAATCAGTCCATAGAGACGAACAGAATGAGACCTTCCGGCCCAAGCGTGG 4345
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4346 CGCTGCGGGCACTTTGGTAGACTGTGCCACCACGGCGTGTGTTGTGAAACGTGAAATAAAAAGAGCAAGAAAGA 4419
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4420 AAAAGGAAACAAAATAAGACCGTCTGACAGCAACAACGGTCCCACAAACAAGTCACAAAAGATACCGTTAAACT 4493
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4494 TTTTTTTTTTTTTATCATTTTACTACATGAACATCATGGATAACAAGGGATTCTGATTCATTATTAATTTCATT 4567
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4568 AATTATATTTTCTGATATGAGTCTAGAACTTACTGCAAAAACAAGACAAAACTAAAAAAATACAACTGAGAAGG 4641
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4642 GTGAAGAGAAGTATGTTTGTTAAACAGTAAAAATGAATAGTATACTTCTTAACTAGGTTTACAACTGGTGGACC 4715
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4716 ACACACCAGGCACTAATCACCTGGTGAGGATTTGGCATATCCACCAAAAAATGCATCCGATTTAACCAACATCT 4789
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4790 CCACCAGCGCTACGGACTCCTCCCAATTCTGACATCTCTTGCAGACAATACTATGCTCTCTACACACTGTTTAG 4863
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4864 AAATGGAAAGGTGATCTGCACTGTATCTTGGGTTTGTTGGCTATGCTTCCTTTGATGACATATATTATACAGTA 4937
Query 949 -------------------------------------------------------------------------- 948
Sbjct 4938 TATATATACATATATTTTTTTTGTTAGAGTTCTAGCCATTTTATTTCTCCGCAGGGTCCTTTCTCAGACATTAC 5011
Query 949 -------------------------------------------------------------------------- 948
Sbjct 5012 TGCATGCTGTATATGGCGTTAGCTGTGTGTTGATCTTCTAAAAGATGATAGAGTTTACTGGTAATTGTGTAATC 5085
Query 949 -------------------------------------------------------------------------- 948
Sbjct 5086 AGCTCCTGCCTTTTTATTTTCTTGGGTTATTTACATGTCAGAGACATTTATAAAAAGTGAAAGGATAAAAAAAA 5159
Query 949 -------------------------------------------------------------------------- 948
Sbjct 5160 AAAAAAACAACTAATACCGGGCGCAGCATCTTTCCAGGTGTGGCTCTGCGCTAGGCCACCCCAGGTGGCCCCGC 5233
Query 949 -------------------------------------------------------------------------- 948
Sbjct 5234 TTTCTCCATTCTGCCCTGTGGCGTTAACAGACAGCAAGCAGCTGAACAAGCAGTACCGTCAGTACCCACTTGCT 5307
Query 949 -------------------------------------------------------------------------- 948
Sbjct 5308 TTAGCCCATTATGGGAATCTCTGATGCCTTTGTGACCACTGGAGAGTTTAATCCTCTTGGTTTATTTTATTTCC 5381
Query 949 -------------------------------------------------------------------------- 948
Sbjct 5382 CACCTTTGTGTGAGTGTGTATGAAAGAGAAGAAAATGCAATTTTTAGGTAATCTTTTTTTTTTTTCCCCTCCCC 5455
Query 949 -------------------------------------------------------------------------- 948
Sbjct 5456 TGAAAGTCTGGGAACCTGAGAGTCCTCGGGGAGGGGTCCTGGATGTGATGAGGGAAAGGGGGATTGGGGGATCC 5529
Query 949 -------------------------------------------------------- 948
Sbjct 5530 GGGAGGGTGGGGTTGTCTCTGACTTGACATTAAAAAGTGTTCCATGTCCCTCTTCA 5585
