Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08252
- Subject:
- NR_136633.2
- Aligned Length:
- 2507
- Identities:
- 1221
- Gaps:
- 1278
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACTTGGGACGGGTCCCTGAGTAGGTGAGGAGGTGGGTAGGAGCTTGCTTATAGAAAAGTGGAATCGAGTAGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTGCTGGTGGAGCCGCTGCCGCCAGGGAACTCAGGGCCGGCTCCTGTTCCTTCAAGAGTGCTGGAGGCCAAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAAATACAAGTTTAATGTTCCTCGTCGGGCAAAAGATAAGGATCCGATCTCCCCCGGCCCGGTGTGCAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGCGACCAACCCCGACCCGGGTTAAAACTCCCAGGGACTCTTCGCTGCTGCCACCTCTTGTTCTCTCCCCCGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCCACTCGGGGTCTCCCTCAGGGCCGGGAGGCACAGCGGTCCCTGCTTGCTGAAGGGCTGGATGTACGCATCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCAGGTTCCCGCGGACTTGGGGGCGCCCGCTGAGCCCCGGCGCCCGCAGAAGACTTGTGTTTGCCTCCTGCAGC 444
Query 1 --------------------------------ATGATCACTGGTGTGTTCAGCATGCGCTTGTGGACCCCAGTG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTCAACCCGGAGGGCAGCGAGGGCCTACCACCATGATCACTGGTGTGTTCAGCATGCGCTTGTGGACCCCAGTG 518
Query 43 GGCGTCCTGACCTCGCTGGCGTACTGCCTGCACCAGCGGCGGGTGGCCCTGGCCGAGCTGCAGGAGGCCGATGG 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGCGTCCTGACCTCGCTGGCGTACTGCCTGCACCAGCGGCGGGTGGCCCTGGCCGAGCTGCAGGAGGCCGATGG 592
Query 117 CCAGTGTCCGGTCGACCGCAGCCTGCTGAAGTTGAAAATGGTGCAGGTCGTGTTTCGACACGGGGCTCGGAGTC 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCAGTGTCCGGTCGACCGCAGCCTGCTGAAGTTGAAAATGGTGCAGGTCGTGTTTCGACACGGGGCTCGGAGTC 666
Query 191 CTCTCAAGCCGCTCCCGCTGGAGGAGCAGGTAGAGTGGAACCCCCAGCTATTAGAGGTCCCACCCCAAACTCAG 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTCTCAAGCCGCTCCCGCTGGAGGAGCAGGTAGAGTGGAACCCCCAGCTATTAGAGGTCCCACCCCAAACTCAG 740
Query 265 TTTGATTACACAGTCACCAATCTAGCTGGTGGTCCGAAACCATATTCTCCTTACGACTCTCAATACCATGAGAC 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTTGATTACACAGTCACCAATCTAGCTGGTGGTCCGAAACCATATTCTCCTTACGACTCTCAATACCATGAGAC 814
Query 339 CACCCTGAAGGGGGGCATGTTTGCTGGGCAGCTGACCAAGGTGGGCATGCAGCAAATGTTTGCCTTGGGAGAGA 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CACCCTGAAGGGGGGCATGTTTGCTGGGCAGCTGACCAAGGTGGGCATGCAGCAAATGTTTGCCTTGGGAGAGA 888
Query 413 GACTGAGGAAGAACTATGTGGAAGACATTCCCTTTCTTTCACCAACCTTCAACCCACAGGAGGTCTTTATTCGT 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GACTGAGGAAGAACTATGTGGAAGACATTCCCTTTCTTTCACCAACCTTCAACCCACAGGAGGTCTTTATTCGT 962
Query 487 TCCACTAACATTTTTCGGAATCTGGAGTCCACCCGTTGTTTGCTGGCTGGGCTTTTCCAGTGTCAGAAAGAAGG 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCCACTAACATTTTTCGGAATCTGGAGTCCACCCGTTGTTTGCTGGCTGGGCTTTTCCAGTGTCAGAAAGAAGG 1036
Query 561 ACCCATCATCATCCACACTGATGAAGCAGATTCAGAAGTCTTGTATCCCAACTACCAAAGCTGCTGGAGCCTGA 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCCATCATCATCCACACTGATGAAGCAGATTCAGAAGTCTTGTATCCCAACTACCAAAGCTGCTGGAGCCTGA 1110
Query 635 GGCAGAGAACCAGAGGCCGGAGGCAGACTGCCTCTTTACAGCCAGGAATCTCAGAGGATTTGAAAAAGGTGAAG 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGCAGAGAACCAGAGGCCGGAGGCAGACTGCCTCTTTACAGCCAGGAATCTCAGAGGATTTGAAAAAGGTGAAG 1184
Query 709 GACAGGATGGGCATTGACAGTAGTGATAAAGTGGACTTCTTCATCCTCCTGGACAAAGTGGCTGCCGAGCAGGC 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1185 GACAGGATGGGCATTGACAGTAGTGATAAAGTGGACTTCTTCATCCTCCTGGACAACGTGGCTGCCGAGCAGG- 1257
Query 783 ACACAA-----CCTCC--CAAGCTGCCCCATGCTGAAGAGATTTGCACGGATGATCGAACAGAGAGCTGTGGAC 849
|.|| .|||| ||.|.| ||||| ||| |.||||| |||||
Sbjct 1258 --AGAAGATGGGCTCCTGCAGGTT---CCATG--GAA------------GCTGATC--------AGCTG----- 1299
Query 850 ACATCCTTGTACATACTGCCCAAGGA---AGACAGGGAAAGTCTTCAGATGGCAGTAGGCCCATTCCTCCACAT 920
||| || || .|||||||||||||||||||||||||||||||||||||||||
Sbjct 1300 -------------------CCA--GAATCAG-TAGGGAAAGTCTTCAGATGGCAGTAGGCCCATTCCTCCACAT 1351
Query 921 CCTAGAGAGCAACCTGCTGAAAGCCATGGACTCTGCCACTGCCCCCGACAAGATCAGAAAGCTGTATCTCTATG 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1352 CCTAGAGAGCAACCTGCTGAAAGCCATGGACTCTGCCACTGCCCCCGACAAGATCAGAAAGCTGTATCTCTATG 1425
Query 995 CGGCTCATGATGTGACCTTCATACCGCTCTTAATGACCCTGGGGATTTTTGACCACAAATGGCCACCGTTTGCT 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1426 CGGCTCATGATGTGACCTTCATACCGCTCTTAATGACCCTGGGGATTTTTGACCACAAATGGCCACCGTTTGCT 1499
Query 1069 GTTGACCTGACCATGGAACTTTACCAGCACCTGGAATCTAAGGAGTGGTTTGTGCAGCTCTATTACCACGGGA- 1141
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 GTTGACCTGACCATGGAACTTTACCAGCACCTGGAATCTAAGGAGTGGTTTGTGCAGCTCTATTACCACGGGAA 1573
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 1574 GGTAATACCCCTGAGGTGGGGTTGGGTGGTGGTGAGGCACCCTCCTGCAAAACCCACCTACCTGAGTTAGCACC 1647
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 1648 AAGTCTCCCTCCTCAGGCCCAGTGGAGTCTCTCTTGGCACAGTCAGCTCTCTGAATCCTATAGGGCAACTCCTG 1721
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 1722 GCTATGGCCCAGGGGTCAGGCAGAACTTGACAGATGGTGGCAGGATGGGGCTTGAGCCTTATCCCAGTTCTGTT 1795
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 1796 ACAGACTCCTAGGAACAGGGTCCCCCTCCTCTTCTCCTGAGCGTCCCTGTCAGGATGTCGCCTCCTGGCTGTGA 1869
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 1870 GACCTGTTTTGGAGATTGTTGGTGGTATCTTTGGGAGGTGATGTGTGCTGCTGTTAGCACCCGTGGTGTTGGCT 1943
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 1944 GCTTCATCAGGGCTGGGGTCCAGGGCAGAGGCCAGAGCACGCCCCAGGGATGAGCCTGTTGGTTCTCCCAGCTC 2017
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2018 GGGGATGTAACTCGACTCTTTCTTCCCAGTCAATTCAACACTTTTTGAGTGACTTTTACAAGCAGAGCATAGTG 2091
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2092 CTTTTATTCTGGAAGCTCACCGGGTAGTGGGGCCTTCCTGTCTGTAATATGTATGCACATGTATACCACATGGA 2165
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2166 TCAGAGCCTCTCAGATCTCTGGGCTTAGCTGGAAATAGCAGAAGGACAGGTTCCTCGGCGGACCTGCTGAGTTA 2239
Query 1142 ------------AGGAGCAGGTGCCGAGAGGTTGCCCTGATGGGCTCTGCCCGCTGGACATGTTCTTGAATGCC 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2240 TGTTTCTTCTGCAGGAGCAGGTGCCGAGAGGTTGCCCTGATGGGCTCTGCCCGCTGGACATGTTCTTGAATGCC 2313
Query 1204 ATGTCAGTTTATACCTTAAGCCCAGAAAAATACCATGCACTCTGCTCTCAAACTCAGGTGATGGAAGTTGGAAA 1277
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 2314 ATGTCAGTTTATACCTTAAGCCCAGAAAAATACCACGCACTCTGCTCTCAAACTCAGGTGATGGAAGTTGGAAA 2387
Query 1278 TGAAGAG---------------------------------------------------------- 1284
|||||||
Sbjct 2388 TGAAGAGTAACTGATTTATAAAAGCAGGATGTGTTGATTTTAAAATAAAGTGCCTTTATACAATG 2452
