Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08252
- Subject:
- NR_136636.2
- Aligned Length:
- 2827
- Identities:
- 1221
- Gaps:
- 1598
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACTTGGGACGGGTCCCTGAGTAGGTGAGGAGGTGGGTAGGAGCTTGCTTATAGAAAAGTGGAATCGAGTAGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTGCTGGTGGAGCCGCTGCCGCCAGGGAACTCAGGGCCGGCTCCTGTTCCTTCAAGAGTGCTGGAGGCCAAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAAATACAAGTTTAATGTTCCTCGTCGGGCAAAAGATAAGGATCCGATCTCCCCCGGCCCGGTGTGCAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGCGACCAACCCCGACCCGGGTTAAAACTCCCAGGGACTCTTCGCTGCTGCCACCTCTTGTTCTCTCCCCCGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCCACTCGGGGTCTCCCTCAGGGCCGGGAGGCACAGCGGTCCCTGCTTGCTGAAGGGCTGGATGTACGCATCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCAGGTTCCCGCGGACTTGGGGGCGCCCGCTGAGCCCCGGCGCCCGCAGAAGACTTGTGTTTGCCTCCTGCAGC 444
Query 1 --------------------------------ATGATCACTGGTGTGTTCAGCATGCGCTTGTGGACCCCAGTG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTCAACCCGGAGGGCAGCGAGGGCCTACCACCATGATCACTGGTGTGTTCAGCATGCGCTTGTGGACCCCAGTG 518
Query 43 GGCGTCCTGACCTCGCTGGCGTACTGCCTGCACCAGCGGCGGGTGGCCCTGGCCGAGCTGCAGGAGGCCGATGG 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGCGTCCTGACCTCGCTGGCGTACTGCCTGCACCAGCGGCGGGTGGCCCTGGCCGAGCTGCAGGAGGCCGATGG 592
Query 117 CCAGTGTCCGGTCGACCGCAGCCTGCTGAAGTTGAAAATGGTGCAGGTCGTGTTTCGACACGGGGCTCGGAGTC 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCAGTGTCCGGTCGACCGCAGCCTGCTGAAGTTGAAAATGGTGCAGGTCGTGTTTCGACACGGGGCTCGGAGTC 666
Query 191 CTCTCAAGCCGCTCCCGCTGGAGGAG------------------------------------------------ 216
||||||||||||||||||||||||||
Sbjct 667 CTCTCAAGCCGCTCCCGCTGGAGGAGCAGGTGAGAGGTCGGCCCGGGCTGGGGCTGGTGGGGCGAGGACCGTGT 740
Query 217 -------------------------------------------------------------------------- 216
Sbjct 741 GCCAGGCCAGGAGTCTCGCCCTGACACACATCTTCAGAGCTTTACTCGCGCGGAGCGGGGCTCGGGTTGGGTCC 814
Query 217 -------------------------------------------------------------------------- 216
Sbjct 815 AGAAGAAGGGAAAACAGCAGTAGCCAGTGACTCCCCAGGCTCTTGAGCAAAGGACCTGCTGGGGTTAGGACAGC 888
Query 217 -------------------------------------------------------------------------- 216
Sbjct 889 CCCGGAACTTCCAGTTTTGCCCTGATGGCGCAGCCATCAGTAAGCGCTGCTTAAGACGCATGGGAGTCGCCTGG 962
Query 217 --------------------------------------------------CAGGTAGAGTGGAACCCCCAGCTA 240
||||||||||||||||||||||||
Sbjct 963 GGATCCTGCTACGTTGCAGATTCTGATTCAGCAGGTGTGGAGTAGTGCCCCAGGTAGAGTGGAACCCCCAGCTA 1036
Query 241 TTAGAGGTCCCACCCCAAACTCAGTTTGATTACACAGTCACCAATCTAGCTGGTGGTCCGAAACCATATTCTCC 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTAGAGGTCCCACCCCAAACTCAGTTTGATTACACAGTCACCAATCTAGCTGGTGGTCCGAAACCATATTCTCC 1110
Query 315 TTACGACTCTCAATACCATGAGACCACCCTGAAGGGGGGCATGTTTGCTGGGCAGCTGACCAAGGTGGGCATGC 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTACGACTCTCAATACCATGAGACCACCCTGAAGGGGGGCATGTTTGCTGGGCAGCTGACCAAGGTGGGCATGC 1184
Query 389 AGCAAATGTTTGCCTTGGGAGAGAGACTGAGGAAGAACTATGTGGAAGACATTCCCTTTCTTTCACCAACCTTC 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCAAATGTTTGCCTTGGGAGAGAGACTGAGGAAGAACTATGTGGAAGACATTCCCTTTCTTTCACCAACCTTC 1258
Query 463 AACCCACAGGAGGTCTTTATTCGTTCCACTAACATTTTTCGGAATCTGGAGTCCACCCGTTGTTTGCTGGCTGG 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AACCCACAGGAGGTCTTTATTCGTTCCACTAACATTTTTCGGAATCTGGAGTCCACCCGTTGTTTGCTGGCTGG 1332
Query 537 GCTTTTCCAGTGTCAGAAAGAAGGACCCATCATCATCCACACTGATGAAGCAGATTCAGAAGTCTTGTATCCCA 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCTTTTCCAGTGTCAGAAAGAAGGACCCATCATCATCCACACTGATGAAGCAGATTCAGAAGTCTTGTATCCCA 1406
Query 611 ACTACCAAAGCTGCTGGAGCCTGAGGCAGAGAACCAGAGGCCGGAGGCAGACTGCCTCTTTACAGCCAGGAATC 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ACTACCAAAGCTGCTGGAGCCTGAGGCAGAGAACCAGAGGCCGGAGGCAGACTGCCTCTTTACAGCCAGGAATC 1480
Query 685 TCAGAGGATTTGAAAAAGGTGAAGGACAGGATGGGCATTGACAGTAGTGATAAAGTGGACTTCTTCATCCTCCT 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCAGAGGATTTGAAAAAGGTGAAGGACAGGATGGGCATTGACAGTAGTGATAAAGTGGACTTCTTCATCCTCCT 1554
Query 759 GGACAAAGTGGCTGCCGAGCAGGCACACAA-----CCTCC--CAAGCTGCCCCATGCTGAAGAGATTTGCACGG 825
||||||.|||||||||||||||| |.|| .|||| ||.|.| ||||| ||| |
Sbjct 1555 GGACAACGTGGCTGCCGAGCAGG---AGAAGATGGGCTCCTGCAGGTT---CCATG--GAA------------G 1608
Query 826 ATGATCGAACAGAGAGCTGTGGACACATCCTTGTACATACTGCCCAAGGA---AGACAGGGAAAGTCTTCAGAT 896
.||||| ||||| ||| || || .|||||||||||||||||
Sbjct 1609 CTGATC--------AGCTG------------------------CCA--GAATCAG-TAGGGAAAGTCTTCAGAT 1647
Query 897 GGCAGTAGGCCCATTCCTCCACATCCTAGAGAGCAACCTGCTGAAAGCCATGGACTCTGCCACTGCCCCCGACA 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1648 GGCAGTAGGCCCATTCCTCCACATCCTAGAGAGCAACCTGCTGAAAGCCATGGACTCTGCCACTGCCCCCGACA 1721
Query 971 AGATCAGAAAGCTGTATCTCTATGCGGCTCATGATGTGACCTTCATACCGCTCTTAATGACCCTGGGGATTTTT 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1722 AGATCAGAAAGCTGTATCTCTATGCGGCTCATGATGTGACCTTCATACCGCTCTTAATGACCCTGGGGATTTTT 1795
Query 1045 GACCACAAATGGCCACCGTTTGCTGTTGACCTGACCATGGAACTTTACCAGCACCTGGAATCTAAGGAGTGGTT 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 GACCACAAATGGCCACCGTTTGCTGTTGACCTGACCATGGAACTTTACCAGCACCTGGAATCTAAGGAGTGGTT 1869
Query 1119 TGTGCAGCTCTATTACCACGGGA--------------------------------------------------- 1141
|||||||||||||||||||||||
Sbjct 1870 TGTGCAGCTCTATTACCACGGGAAGGTAATACCCCTGAGGTGGGGTTGGGTGGTGGTGAGGCACCCTCCTGCAA 1943
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 1944 AACCCACCTACCTGAGTTAGCACCAAGTCTCCCTCCTCAGGCCCAGTGGAGTCTCTCTTGGCACAGTCAGCTCT 2017
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2018 CTGAATCCTATAGGGCAACTCCTGGCTATGGCCCAGGGGTCAGGCAGAACTTGACAGATGGTGGCAGGATGGGG 2091
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2092 CTTGAGCCTTATCCCAGTTCTGTTACAGACTCCTAGGAACAGGGTCCCCCTCCTCTTCTCCTGAGCGTCCCTGT 2165
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2166 CAGGATGTCGCCTCCTGGCTGTGAGACCTGTTTTGGAGATTGTTGGTGGTATCTTTGGGAGGTGATGTGTGCTG 2239
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2240 CTGTTAGCACCCGTGGTGTTGGCTGCTTCATCAGGGCTGGGGTCCAGGGCAGAGGCCAGAGCACGCCCCAGGGA 2313
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2314 TGAGCCTGTTGGTTCTCCCAGCTCGGGGATGTAACTCGACTCTTTCTTCCCAGTCAATTCAACACTTTTTGAGT 2387
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2388 GACTTTTACAAGCAGAGCATAGTGCTTTTATTCTGGAAGCTCACCGGGTAGTGGGGCCTTCCTGTCTGTAATAT 2461
Query 1142 -------------------------------------------------------------------------- 1141
Sbjct 2462 GTATGCACATGTATACCACATGGATCAGAGCCTCTCAGATCTCTGGGCTTAGCTGGAAATAGCAGAAGGACAGG 2535
Query 1142 ------------------------------------AGGAGCAGGTGCCGAGAGGTTGCCCTGATGGGCTCTGC 1179
||||||||||||||||||||||||||||||||||||||
Sbjct 2536 TTCCTCGGCGGACCTGCTGAGTTATGTTTCTTCTGCAGGAGCAGGTGCCGAGAGGTTGCCCTGATGGGCTCTGC 2609
Query 1180 CCGCTGGACATGTTCTTGAATGCCATGTCAGTTTATACCTTAAGCCCAGAAAAATACCATGCACTCTGCTCTCA 1253
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 2610 CCGCTGGACATGTTCTTGAATGCCATGTCAGTTTATACCTTAAGCCCAGAAAAATACCACGCACTCTGCTCTCA 2683
Query 1254 AACTCAGGTGATGGAAGTTGGAAATGAAGAG------------------------------------------- 1284
|||||||||||||||||||||||||||||||
Sbjct 2684 AACTCAGGTGATGGAAGTTGGAAATGAAGAGTAACTGATTTATAAAAGCAGGATGTGTTGATTTTAAAATAAAG 2757
Query 1285 --------------- 1284
Sbjct 2758 TGCCTTTATACAATG 2772
