Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08252
Subject:
NR_136636.2
Aligned Length:
2827
Identities:
1221
Gaps:
1598

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CACTTGGGACGGGTCCCTGAGTAGGTGAGGAGGTGGGTAGGAGCTTGCTTATAGAAAAGTGGAATCGAGTAGTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTTGCTGGTGGAGCCGCTGCCGCCAGGGAACTCAGGGCCGGCTCCTGTTCCTTCAAGAGTGCTGGAGGCCAAAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGAAATACAAGTTTAATGTTCCTCGTCGGGCAAAAGATAAGGATCCGATCTCCCCCGGCCCGGTGTGCAGCAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGCGACCAACCCCGACCCGGGTTAAAACTCCCAGGGACTCTTCGCTGCTGCCACCTCTTGTTCTCTCCCCCGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCCCACTCGGGGTCTCCCTCAGGGCCGGGAGGCACAGCGGTCCCTGCTTGCTGAAGGGCTGGATGTACGCATCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCAGGTTCCCGCGGACTTGGGGGCGCCCGCTGAGCCCCGGCGCCCGCAGAAGACTTGTGTTTGCCTCCTGCAGC  444

Query    1  --------------------------------ATGATCACTGGTGTGTTCAGCATGCGCTTGTGGACCCCAGTG  42
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTCAACCCGGAGGGCAGCGAGGGCCTACCACCATGATCACTGGTGTGTTCAGCATGCGCTTGTGGACCCCAGTG  518

Query   43  GGCGTCCTGACCTCGCTGGCGTACTGCCTGCACCAGCGGCGGGTGGCCCTGGCCGAGCTGCAGGAGGCCGATGG  116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGCGTCCTGACCTCGCTGGCGTACTGCCTGCACCAGCGGCGGGTGGCCCTGGCCGAGCTGCAGGAGGCCGATGG  592

Query  117  CCAGTGTCCGGTCGACCGCAGCCTGCTGAAGTTGAAAATGGTGCAGGTCGTGTTTCGACACGGGGCTCGGAGTC  190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAGTGTCCGGTCGACCGCAGCCTGCTGAAGTTGAAAATGGTGCAGGTCGTGTTTCGACACGGGGCTCGGAGTC  666

Query  191  CTCTCAAGCCGCTCCCGCTGGAGGAG------------------------------------------------  216
            ||||||||||||||||||||||||||                                                
Sbjct  667  CTCTCAAGCCGCTCCCGCTGGAGGAGCAGGTGAGAGGTCGGCCCGGGCTGGGGCTGGTGGGGCGAGGACCGTGT  740

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct  741  GCCAGGCCAGGAGTCTCGCCCTGACACACATCTTCAGAGCTTTACTCGCGCGGAGCGGGGCTCGGGTTGGGTCC  814

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct  815  AGAAGAAGGGAAAACAGCAGTAGCCAGTGACTCCCCAGGCTCTTGAGCAAAGGACCTGCTGGGGTTAGGACAGC  888

Query  217  --------------------------------------------------------------------------  216
                                                                                      
Sbjct  889  CCCGGAACTTCCAGTTTTGCCCTGATGGCGCAGCCATCAGTAAGCGCTGCTTAAGACGCATGGGAGTCGCCTGG  962

Query  217  --------------------------------------------------CAGGTAGAGTGGAACCCCCAGCTA  240
                                                              ||||||||||||||||||||||||
Sbjct  963  GGATCCTGCTACGTTGCAGATTCTGATTCAGCAGGTGTGGAGTAGTGCCCCAGGTAGAGTGGAACCCCCAGCTA  1036

Query  241  TTAGAGGTCCCACCCCAAACTCAGTTTGATTACACAGTCACCAATCTAGCTGGTGGTCCGAAACCATATTCTCC  314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TTAGAGGTCCCACCCCAAACTCAGTTTGATTACACAGTCACCAATCTAGCTGGTGGTCCGAAACCATATTCTCC  1110

Query  315  TTACGACTCTCAATACCATGAGACCACCCTGAAGGGGGGCATGTTTGCTGGGCAGCTGACCAAGGTGGGCATGC  388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TTACGACTCTCAATACCATGAGACCACCCTGAAGGGGGGCATGTTTGCTGGGCAGCTGACCAAGGTGGGCATGC  1184

Query  389  AGCAAATGTTTGCCTTGGGAGAGAGACTGAGGAAGAACTATGTGGAAGACATTCCCTTTCTTTCACCAACCTTC  462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGCAAATGTTTGCCTTGGGAGAGAGACTGAGGAAGAACTATGTGGAAGACATTCCCTTTCTTTCACCAACCTTC  1258

Query  463  AACCCACAGGAGGTCTTTATTCGTTCCACTAACATTTTTCGGAATCTGGAGTCCACCCGTTGTTTGCTGGCTGG  536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AACCCACAGGAGGTCTTTATTCGTTCCACTAACATTTTTCGGAATCTGGAGTCCACCCGTTGTTTGCTGGCTGG  1332

Query  537  GCTTTTCCAGTGTCAGAAAGAAGGACCCATCATCATCCACACTGATGAAGCAGATTCAGAAGTCTTGTATCCCA  610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GCTTTTCCAGTGTCAGAAAGAAGGACCCATCATCATCCACACTGATGAAGCAGATTCAGAAGTCTTGTATCCCA  1406

Query  611  ACTACCAAAGCTGCTGGAGCCTGAGGCAGAGAACCAGAGGCCGGAGGCAGACTGCCTCTTTACAGCCAGGAATC  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ACTACCAAAGCTGCTGGAGCCTGAGGCAGAGAACCAGAGGCCGGAGGCAGACTGCCTCTTTACAGCCAGGAATC  1480

Query  685  TCAGAGGATTTGAAAAAGGTGAAGGACAGGATGGGCATTGACAGTAGTGATAAAGTGGACTTCTTCATCCTCCT  758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TCAGAGGATTTGAAAAAGGTGAAGGACAGGATGGGCATTGACAGTAGTGATAAAGTGGACTTCTTCATCCTCCT  1554

Query  759  GGACAAAGTGGCTGCCGAGCAGGCACACAA-----CCTCC--CAAGCTGCCCCATGCTGAAGAGATTTGCACGG  825
            ||||||.||||||||||||||||   |.||     .||||  ||.|.|   |||||  |||            |
Sbjct 1555  GGACAACGTGGCTGCCGAGCAGG---AGAAGATGGGCTCCTGCAGGTT---CCATG--GAA------------G  1608

Query  826  ATGATCGAACAGAGAGCTGTGGACACATCCTTGTACATACTGCCCAAGGA---AGACAGGGAAAGTCTTCAGAT  896
            .|||||        |||||                        |||  ||   || .|||||||||||||||||
Sbjct 1609  CTGATC--------AGCTG------------------------CCA--GAATCAG-TAGGGAAAGTCTTCAGAT  1647

Query  897  GGCAGTAGGCCCATTCCTCCACATCCTAGAGAGCAACCTGCTGAAAGCCATGGACTCTGCCACTGCCCCCGACA  970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1648  GGCAGTAGGCCCATTCCTCCACATCCTAGAGAGCAACCTGCTGAAAGCCATGGACTCTGCCACTGCCCCCGACA  1721

Query  971  AGATCAGAAAGCTGTATCTCTATGCGGCTCATGATGTGACCTTCATACCGCTCTTAATGACCCTGGGGATTTTT  1044
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1722  AGATCAGAAAGCTGTATCTCTATGCGGCTCATGATGTGACCTTCATACCGCTCTTAATGACCCTGGGGATTTTT  1795

Query 1045  GACCACAAATGGCCACCGTTTGCTGTTGACCTGACCATGGAACTTTACCAGCACCTGGAATCTAAGGAGTGGTT  1118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1796  GACCACAAATGGCCACCGTTTGCTGTTGACCTGACCATGGAACTTTACCAGCACCTGGAATCTAAGGAGTGGTT  1869

Query 1119  TGTGCAGCTCTATTACCACGGGA---------------------------------------------------  1141
            |||||||||||||||||||||||                                                   
Sbjct 1870  TGTGCAGCTCTATTACCACGGGAAGGTAATACCCCTGAGGTGGGGTTGGGTGGTGGTGAGGCACCCTCCTGCAA  1943

Query 1142  --------------------------------------------------------------------------  1141
                                                                                      
Sbjct 1944  AACCCACCTACCTGAGTTAGCACCAAGTCTCCCTCCTCAGGCCCAGTGGAGTCTCTCTTGGCACAGTCAGCTCT  2017

Query 1142  --------------------------------------------------------------------------  1141
                                                                                      
Sbjct 2018  CTGAATCCTATAGGGCAACTCCTGGCTATGGCCCAGGGGTCAGGCAGAACTTGACAGATGGTGGCAGGATGGGG  2091

Query 1142  --------------------------------------------------------------------------  1141
                                                                                      
Sbjct 2092  CTTGAGCCTTATCCCAGTTCTGTTACAGACTCCTAGGAACAGGGTCCCCCTCCTCTTCTCCTGAGCGTCCCTGT  2165

Query 1142  --------------------------------------------------------------------------  1141
                                                                                      
Sbjct 2166  CAGGATGTCGCCTCCTGGCTGTGAGACCTGTTTTGGAGATTGTTGGTGGTATCTTTGGGAGGTGATGTGTGCTG  2239

Query 1142  --------------------------------------------------------------------------  1141
                                                                                      
Sbjct 2240  CTGTTAGCACCCGTGGTGTTGGCTGCTTCATCAGGGCTGGGGTCCAGGGCAGAGGCCAGAGCACGCCCCAGGGA  2313

Query 1142  --------------------------------------------------------------------------  1141
                                                                                      
Sbjct 2314  TGAGCCTGTTGGTTCTCCCAGCTCGGGGATGTAACTCGACTCTTTCTTCCCAGTCAATTCAACACTTTTTGAGT  2387

Query 1142  --------------------------------------------------------------------------  1141
                                                                                      
Sbjct 2388  GACTTTTACAAGCAGAGCATAGTGCTTTTATTCTGGAAGCTCACCGGGTAGTGGGGCCTTCCTGTCTGTAATAT  2461

Query 1142  --------------------------------------------------------------------------  1141
                                                                                      
Sbjct 2462  GTATGCACATGTATACCACATGGATCAGAGCCTCTCAGATCTCTGGGCTTAGCTGGAAATAGCAGAAGGACAGG  2535

Query 1142  ------------------------------------AGGAGCAGGTGCCGAGAGGTTGCCCTGATGGGCTCTGC  1179
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct 2536  TTCCTCGGCGGACCTGCTGAGTTATGTTTCTTCTGCAGGAGCAGGTGCCGAGAGGTTGCCCTGATGGGCTCTGC  2609

Query 1180  CCGCTGGACATGTTCTTGAATGCCATGTCAGTTTATACCTTAAGCCCAGAAAAATACCATGCACTCTGCTCTCA  1253
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 2610  CCGCTGGACATGTTCTTGAATGCCATGTCAGTTTATACCTTAAGCCCAGAAAAATACCACGCACTCTGCTCTCA  2683

Query 1254  AACTCAGGTGATGGAAGTTGGAAATGAAGAG-------------------------------------------  1284
            |||||||||||||||||||||||||||||||                                           
Sbjct 2684  AACTCAGGTGATGGAAGTTGGAAATGAAGAGTAACTGATTTATAAAAGCAGGATGTGTTGATTTTAAAATAAAG  2757

Query 1285  ---------------  1284
                           
Sbjct 2758  TGCCTTTATACAATG  2772

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