Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08344
- Subject:
- XM_011517911.2
- Aligned Length:
- 1535
- Identities:
- 963
- Gaps:
- 532
Alignment
Query 1 ATGAACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAACATGCCCCAGTCCCTGGGCAACCAGCCACTGCCCCCAGAACCGCCATCCCTTGGAACCCCTGCGGAGGG 74
Query 75 GCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCCTGGGACCACGTCCCCACCCGAGCACTGCTGGCCAGTGCGCCCGACTCTGCGCAACGAGCTGGACACCTTCT 148
Query 149 CTGTCCACTTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTGTCCACTTCTACATCTTCTTTGGCCCAAGTGTGGCCCTTCCCCCTGAGCGCCCAGCCGTGTTCGCCATGAGG 222
Query 223 CTGTTGCCAGTGCTGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGC------------------ 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGTTGCCAGTGCTGGACAGTGGAGGCGTCCTCAGCCTGGAGCTCCAGCTCAATGCGTTTTTCTGTTCTGAGAA 296
Query 279 ------------------------------------------------------------GAGCTCCGTGCGCC 292
||||||||||||||
Sbjct 297 TGGAGGTGAGAGAGCAGCTTTGGCGTGGAGAGCGCCGGGAGGAATGGGCTGTCCTTGGAAGAGCTCCGTGCGCC 370
Query 293 AGGAAAACGTGACGGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGT 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGAAAACGTGACGGTGTTTGGATGCTTGACTCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGT 444
Query 367 TCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATT 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCCAAAGAGTCCCTGGCCGGCTTCCTCCTCTCTGTCAGTGCCACCACCAGGGTTGCCAGGCTGCGAATCCCATT 518
Query 441 CCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCA 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCCGCAGACGGGGACCTGGTTCCTGGCCCTCCGCTCCCTGTGCGGGGTGGGGCCTCGGTTCGTGCGGTGCCGCA 592
Query 515 ACGCGACGGCCGAGGTGTGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGC 588
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACGCGACGGCCGAGGTGCGGATGCGCACCTTCCTGTCCCCATGCGTGGACGACTGCGGGCCCTACGGCCAGTGC 666
Query 589 AAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCAC 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGCTGCTGCGCACACACAATTATCTGTACGCAGCCTGCGAGTGCAAGGCCGGGTGGAGAGGCTGGGGCTGCAC 740
Query 663 CGACAGTGCAGATGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGT 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CGACAGTGCAGATGCGCTCACCTATGGATTCCAGCTGCTGTCCACACTCCTGCTCTGCCTGAGCAACCTCATGT 814
Query 737 TTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTC 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTCTGCCACCTGTGGTCCTGGCCATTCGGAGTCGATATGTGCTGGAAGCTGCAGTCTACACCTTCACCATGTTC 888
Query 811 TTCTCCACGGT-----ATGC------------------GGTGG-TGTCTGCATCTT--ATCACTGGGTGCT--- 855
|||||||||.| |||| .|||| |.||||||||.| |..||...|||||
Sbjct 889 TTCTCCACGTTCTATCATGCCTGTGACCAGCCAGGCATCGTGGTTTTCTGCATCATGGACTACGATGTGCTGCA 962
Query 856 ----TGTG----CATGG---------TG-----GTGGGTCACAGTCTGTATTTCCA--CCACGTTCT-----CC 900
|||| |.||| || |||||||||.||| |||.||| .|.|||| | ||
Sbjct 963 GTTCTGTGATTTCCTGGGCTCCTTAATGTCCGTGTGGGTCACTGTC---ATTGCCATGGCTCGTT-TACAGCCC 1032
Query 901 GAG--------GGT----------TTGGGA---------------ATGTCTGTGC--CTT-------------- 925
|.| ||| .||||| |||.||.||| |||
Sbjct 1033 GTGGTCAAGCAGGTGCTGTATTTGCTGGGAGCTATGCTGCTGTCCATGGCTCTGCAGCTTGACCGACATGGACT 1106
Query 926 ----------------CACTGTGTCTT-----------------CTACAGACAGAGACAGCAG----------- 955
|.|.||.|||| |.||||.|.|..|| ||||
Sbjct 1107 CTGGAACCTGCTTGGACCCAGTCTCTTCGCCCTGGGGATCTTGGCCACAGCCTGGTAC-GCAGCGTCCGCCGCC 1179
Query 956 -----TGCTTCCCA--------------------------------AACTGTCA-------TGCATAGATAATG 985
||||.|||| ..|||.|| ||| ||..|.||
Sbjct 1180 GGCACTGCTACCCACCCACGTGGCGCCGCTGGCTTTTCTACTTGTGCCCTGGCAGCCTTATTGC--AGGCAGTG 1251
Query 986 --GTCAT---------TTTTGT-AAGACACATTGGAGTAAA--------------------------------- 1014
|||.| |||||| .||||.| |.|..||
Sbjct 1252 CCGTCCTGCTTTATGCTTTTGTGGAGACCC----GGGACAACTACTTCTACATTCACAGCATTTGGCATATGCT 1321
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1322 CATTGCGGGCAGTGTGGGCTTCCTGCTGCCCCCTCGTGCCAAGACTGACCACGGGGTCCCATCTGGAGCCCGGG 1395
Query 1015 -------------------------------------------------------------------------- 1014
Sbjct 1396 CCCGGGGCTGTGGTTACCAGCTATGCATCAACGAGCAGGAGGAGCTGGGCCTCGTGGGCCCAGGAGGGGCCACT 1469
Query 1015 ------------------------------------------------------- 1014
Sbjct 1470 GTCAGCAGCATCTGTGCCAGCTGAGAGGGGCTTTGGGCCTGGCCCTGAGGGGATA 1524