Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_08349
• Subject: NM_001289535.1
• Aligned Length: 1008
• Identities: 813
• Gaps: 87

Alignment

Query    1  ATGGCGGTGGACATCACGCTGCTATTCCGGGCCAGCGTCAAGACCGTGAAGACGCGGAACAAGGCGCTGGGAGT  74
            |||||||||||||||||.|||||.||||||||.|||||||||||.||||||||||||||.|||||.||||||||
Sbjct    1  ATGGCGGTGGACATCACACTGCTCTTCCGGGCTAGCGTCAAGACAGTGAAGACGCGGAATAAGGCTCTGGGAGT  74

Query   75  GGCGGTGGGCGGCGGGGTCGATGGCAGCCGGGACGAGCTGTTCCGCCGGAGCCCCCGGCCCAAGGGCGACTTCT  148
            |||.|||||.|||||||.||||||||||||||||||||||||||||.|.|||||.|||||||||||.|||||||
Sbjct   75  GGCCGTGGGTGGCGGGGCCGATGGCAGCCGGGACGAGCTGTTCCGCAGAAGCCCTCGGCCCAAGGGAGACTTCT  148

Query  149  CCAGCCGGGCCCGCGAAGTGATTTCTCACATTGGCAAACTGAGAGATTTTCTTCTGGAACACAGGAAAGATTAT  222
            |||||||||||||.||||||||||||||||||||.||.||||||||||||||.|||||.||||||||.||.|||
Sbjct  149  CCAGCCGGGCCCGTGAAGTGATTTCTCACATTGGGAAGCTGAGAGATTTTCTCCTGGAGCACAGGAAGGAGTAT  222

Query  223  ATTAATGCTTATAGCCATACCATGTCTGAATATGGGAGGATGACAGACACAGAACGAGACCAGATAGACCAGGA  296
            ||||||||.||.|||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||||||||
Sbjct  223  ATTAATGCCTACAGCCACACCATGTCTGACTATGGGAGGATGACAGACACAGAGCGAGACCAGATAGACCAGGA  296

Query  297  TGCCCAGATATTCATGAGGACCTGTTCAGAAGCAATTCAGCAACTACGAACAGAAGCTCACAAGGAGATACATT  370
            |||.|||||||||||.||||||||||||||||||||.||.|||||..||||||||||.||||||||||||||||
Sbjct  297  TGCTCAGATATTCATAAGGACCTGTTCAGAAGCAATCCATCAACTCAGAACAGAAGCCCACAAGGAGATACATT  370

Query  371  CCCAGCAAGTGAAGGAGCACAGGACCGCTGTTTTGGATTTCATTGAAGATTACTTGAAAAGAGTATGTAAACTT  444
            ||||||||||||||||.||||||||.||.||||||||||||.||||.||||||||.||||||||.|||||.|||
Sbjct  371  CCCAGCAAGTGAAGGAACACAGGACTGCCGTTTTGGATTTCGTTGACGATTACTTAAAAAGAGTGTGTAAGCTT  444

Query  445  TACTCAGAACAGAGAGCCATCCGAGTTAAAAGAGTGGTGGATAAGAAAAGATTATCTAAGTTGGAACCAGAACC  518
            |||||.|||||.||||||||||||||.||..|.||||||||.|||||||||.||||||||.|||||||.||.||
Sbjct  445  TACTCTGAACAAAGAGCCATCCGAGTGAAGCGCGTGGTGGACAAGAAAAGACTATCTAAGCTGGAACCTGAGCC  518

Query  519  AAATACAAAGACAAGAGAATCCACATCTTCTGAGAAAGTTTCACAGAGTCCTTCAAAAGACTCTGAAGAAAACC  592
            |.||||.||||..|.|||.||||||   ||||||||||...|.||||...||||..|.||||||||||.|||.|
Sbjct  519  ACATACCAAGAGGAAAGACTCCACA---TCTGAGAAAGCCCCTCAGAACGCTTCCCAGGACTCTGAAGGAAAGC  589

Query  593  CTGCCACTGAAGAACGTCCAGAAAAAATTTTGGCTGAAACACAACCTGAATTGGGAACGTGGGGAGATGGCAAA  666
            ||||..||||.||.|..||||||||...||||||||||.||||.||.|||.|||||||.|||||.||||||||.
Sbjct  590  CTGCTGCTGAGGAGCTGCCAGAAAAGCCTTTGGCTGAATCACAGCCCGAACTGGGAACCTGGGGCGATGGCAAG  663

Query  667  GGCGAAGATGAGTTATCCCCAGAAGAAATACAAATGTTTGAACAGGAAAATCAGCGACTAATTGGTGAAATGAA  740
            ||.|||||||||.|.||.||||||||.|||||.|||||||||||.||||||||||||||.||||||||||||||
Sbjct  664  GGTGAAGATGAGCTGTCTCCAGAAGAGATACAGATGTTTGAACAAGAAAATCAGCGACTCATTGGTGAAATGAA  737

Query  741  CAGCTTGTTTGATGAAGTGAGGCAAATCGAAGGGAGAGTGGTTGAGATTTCCAGACTCCAAGAGATATTCACGG  814
            ||||||||||||.||||||||||||||||||||||.|||.|||||.||||||||||||||||||||||||||.|
Sbjct  738  CAGCTTGTTTGACGAAGTGAGGCAAATCGAAGGGAAAGTCGTTGAAATTTCCAGACTCCAAGAGATATTCACCG  811

Query  815  AAAAGGTTTTGCAACAGGAAGCTGAGATTGACAGCATTCACCAGTTAGTTGTGGGGGCAACTGAAAATATCAAG  888
            ||||||||||||||||||||.|||||||.||||||||||||||||||||.||||||||||||||||||||.|||
Sbjct  812  AAAAGGTTTTGCAACAGGAAACTGAGATCGACAGCATTCACCAGTTAGTCGTGGGGGCAACTGAAAATATTAAG  885

Query  889  GAAGGCAACGAAGACATAAGAGAG---GCCATTAAAAACAACGCTGGCTTCCGCGTGTGGATCCTCTTCTTCCT  959
            |||||||||||||||||..|||||   |||     .|.||..||                              
Sbjct  886  GAAGGCAACGAAGACATCCGAGAGCTAGCC-----CACCAGGGC------------------------------  924

Query  960  CGTGATGTGCTCCTTCTCCTTGCTCTTCCTCGACTGGTACGACAGC  1005
                                                          
Sbjct  925  ----------------------------------------------  924