Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08453
- Subject:
- NR_130972.1
- Aligned Length:
- 1966
- Identities:
- 1093
- Gaps:
- 872
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACGATGCACCGCGCCAGCCCCGACCGACGGACGAGACTGACCCGGACTTAGGCGTTCCGCCTGGCCCGGCGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGGAAAAAAGGCAGTTTTGAAGCATTTAGTGGCAAAAGGGGTAGGAGACGGCTGCTGAAGTGTCTACTACATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGGGACCTGGAAGGCTTCCAGATATCCGCAATGAACAATGAAAAGAAATTGTGAAAGAAGGCGCTTCCCTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCGGAACTAATGAACTCCTGGGTCACGTGGTGCGCACGCGCCAAAGGCACACGATAAAGGAAAACGCGGGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATCGTGGCCTTTAAAATCCGGCTTGCCAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACGGCCTTCCTAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTTTACGGGGCCTGGCGGTGCTGACGCCTGAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAAATGCAGAAG 444
Query 1 --------------------ATGGACTGGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCA 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCA 518
Query 55 AACAAAAAAAAAAGTGAACAAGAATTAAAAGATGAAGAAATGGATTTATTTACAAAATATTACTCCGAATGGAA 128
||||
Sbjct 519 AACA---------------------------------------------------------------------- 522
Query 129 AGGAGGTAGAAAAAACACAAATGAATTCTATAAGACCATTCCCCGGTTTTATTATAGGCTGCCTGCTGAAGATG 202
||||||||||||||||
Sbjct 523 ----------------------------------------------------------CTGCCTGCTGAAGATG 538
Query 203 AAGTCTTACTACAGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAAGCAGAGAACTGTTAGAT 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 AAGTCTTACTACAGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTACAAAGAAAAAGCAGAGAACTGTTAGAT 612
Query 277 AATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 613 AATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT 686
Query 351 GATCAATTACGAAAACTTTTTGAAGGTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAG 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 687 GATCAATTACGAAAACTTTTTGAAGGTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAG 760
Query 425 TCTTTGCTAAACTCCTTCATACAGATTCATATGGAAGAATTTCCATCATGCAGTTCTTTAATTATGTCATGAGA 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 761 TCTTTGCTAAACTCCTTCATACAGATTCATATGGAAGAATTTCCATCATGCAGTTCTTTAATTATGTCATGAGA 834
Query 499 AAAGTTTGGCTTCATCAAACAAGAATAGGACTCAGTTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGAATC 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 AAAGTTTGGCTTCATCAAACAAGAATAGGACTCAGTTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGAATC 908
Query 573 TGATTTAGAAAACTACATATTGGAACTTATCCCTACGTTGCCACAATTAGATGGTCTGGAAAAATCTTTCTACT 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 TGATTTAGAAAACTACATATTGGAACTTATCCCTACGTTGCCACAATTAGATGGTCTGGAAAAATCTTTCTACT 982
Query 647 CCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTCTTCTTTTTAGATCCTTTAAGAACAGGAAAGATAAAAATT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 983 CCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTCTTCTTTTTAGATCCTTTAAGAACAGGAAAGATAAAAATT 1056
Query 721 CAAGATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCA 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1057 CAAGATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCA 1130
Query 795 AGAAACAAATTGGTTTTCTGCTCCTTCTGCCCTAAGAGTTTATGGCCAGTACTTGAATCTTGATAAAGATCACA 868
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 AGAAACAAATTGGTTTTCTGCTCCTTCTGCCCTAAGAGTTT--------------------------------- 1171
Query 869 ATGGCATGCTCAGTAAAGAAGAACTCTCACGCTATGGAACAGCTACCATGACCAATGTCTTCTTAGACCGTGTT 942
Sbjct 1172 -------------------------------------------------------------------------- 1171
Query 943 TTCCAGGAGTGTCTCACTTATGATGGAGAAATGGACTATAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAA 1016
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1172 ------------------------------ATGGACTATAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAA 1215
Query 1017 CAGAAAGGAACCTGCAGCTCTACAATATATTTTCAAACTGCTTGATATTGAGAACAAAGGATACCTGAATGTCT 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1216 CAGAAAGGAACCTGCAGCTCTACAATATATTTTCAAACTGCTTGATATTGAGAACAAAGGATACCTGAATGTCT 1289
Query 1091 TTTCACTTAATTATTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTCAA 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1290 TTTCACTTAATTATTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTCAA 1363
Query 1165 GATGTCAAGGATGAAATCTTTGACATGGTAAAACCAAAGGATCCTTTGAAAATCTCTCTTCAGGATTTAATCAA 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1364 GATGTCAAGGATGAAATCTTTGACATGGTAAAACCAAAGGATCCTTTGAAAATCTCTCTTCAGGATTTAATCAA 1437
Query 1239 CAGTAATCAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 CAGTAATCAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG 1511
Query 1313 CTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTNGATGATACA--------------------------- 1359
|||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1512 CTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTCTTA 1585
Query 1360 -------------------------------------------------------------------------- 1359
Sbjct 1586 TATTATGAGATACTTGAATGCTGCATGTAAAGCCTTTAAAGCAAAATCCTCAGAAATGGTCTAAATAAAACACT 1659
Query 1360 ------------------------------------------ 1359
Sbjct 1660 TGATATGCCTAGAGAACACAGCAAAAAAAAAAAAAAAAAAAA 1701
