Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08495
- Subject:
- NR_024487.2
- Aligned Length:
- 2685
- Identities:
- 783
- Gaps:
- 1802
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGAGGGATGTGAGAGGCCAGGCCGGGGTGTGTGTAGAGGAAGAACGTGAGCCCTTGTGACGCGCAGCAGCGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTAAGACCGGCGAGGAGTCTCGCGTCCTGGAACCTCATTCAGATCCACGGCAGGAAAACCGCGGGTGCGCAGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGAAAACTACGCCTGCGCCGCCTCCAGAGCCTGACTACCTTTAGCAAGGGGACAGCGGCTGAGTGGGTGGTGA 222
Query 1 ----------------------------------------------------ATGGCGTTGCTGGTGCGAGTCC 22
||||||||||||||||||||||
Sbjct 223 CAATCGGGATTCCGGAAGCCCACCTTTCACCCGGAAATGATTGTGGAGGAACATGGCGTTGCTGGTGCGAGTCC 296
Query 23 TTAGGAACCAGACTAGCATTTCTCAGTGGGTTCCAGTATGCAGCCGATTGATACCTGTGTCTCCTACCCAAGGA 96
|||||||||||||||||||.|||||||||||||||||||||||||.|.||.||.|.|||||||||||||||.||
Sbjct 297 TTAGGAACCAGACTAGCATCTCTCAGTGGGTTCCAGTATGCAGCCAACTGGTATCAGTGTCTCCTACCCAAAGA 370
Query 97 CAGGGGGACAGGGCTCTGTCTCGCACTTCCCAGTGGCCCCAGATGAGCCAGTCCCAAGCATGTGGT--GGATCA 168
|||.||..|| |||||||||||||||.|||||.||..|||||.|.|| ||||.| ||||||
Sbjct 371 CAGTGGAGCA------------GCACTTCCCAGTGGCTCCAGAAGAATCAGTCTCGAG--TGTGTTTGGGATCA 430
Query 169 GAACAGATTCCTGGAATAGACATACAGCTGAATAGGAAGTATCACACCACACGTA---AGCTTTCTACTACCAA 239
|||||||.|..||||...||||.|..||.|||||||||.||.||||.||||.||| |||||..|||||||.|
Sbjct 431 GAACAGACTGTTGGAGCGGACACAGCGCAGAATAGGAAATACCACAACACAAGTAAGTAGCTTCTTACTACCCA 504
Query 240 AGATTCCCCACAGCCTGTTGAGGAGAAGGTTGGTGCTTTCACAAAGATAATAGAAGCCATGGGATTCACGGGAC 313
|||||.|||||||||||||||.||||||||.|||.|.|||||.||||||||||||||||||||||||||.||||
Sbjct 505 AGATTTCCCACAGCCTGTTGAAGAGAAGGTCGGTCCCTTCACGAAGATAATAGAAGCCATGGGATTCACTGGAC 578
Query 314 CTTTGAAATACAGTAAATGGAAGATTAAGATTGCGGCCCTGCGCATGTATACTAGCTGTGTGGAGAAAACTGAC 387
|||||||||||||||||||||||||.|||||.||||||||.||||||||.||.|||||.||||||||.||||||
Sbjct 579 CTTTGAAATACAGTAAATGGAAGATCAAGATCGCGGCCCTCCGCATGTACACGAGCTGCGTGGAGAAGACTGAC 652
Query 388 TTCGAGGAATTCTTTCTAAGGTGTCAGATGCCTGATACATTCAATTCATGGTTTCTTATAACCCTACTCCACGT 461
||||||||.||||||||.||||||||||||||.|||||||||||.||.||||||||.||||||||.||.||.||
Sbjct 653 TTCGAGGAGTTCTTTCTGAGGTGTCAGATGCCCGATACATTCAACTCCTGGTTTCTCATAACCCTGCTTCATGT 726
Query 462 CTGGATGTGTCTAGTCCGAATGAAGCAGGAAGGCCGGAGTGGGAAGTACATGTGTCGTATCATAGTTCATTTTA 535
||||||||||||||||||||||||||||||||||||||.|||||||||||||||.||.||||||||||||||.|
Sbjct 727 CTGGATGTGTCTAGTCCGAATGAAGCAGGAAGGCCGGACTGGGAAGTACATGTGCCGGATCATAGTTCATTTCA 800
Query 536 TGTGGGAGGATGTTCAGCAGCGCGGCAGAGTCATGGGGGTTAATCCCTATATCCTGAAGAAGAACATGATCCTC 609
|||||||.|||||..|||||||||||.|.|||||||||||||||.||||||||||.||||||||||||..||||
Sbjct 801 TGTGGGAAGATGTGGAGCAGCGCGGCCGCGTCATGGGGGTTAATTCCTATATCCTAAAGAAGAACATGGCCCTC 874
Query 610 ATGACAAATCATTTCTATGCAGCGATCTTGGGATATGATGAGGGGATCCTTTCAGATGATCATGGGCTGGCCGC 683
|||||.||..|||||||||||||.|||||||||||.|||||||||||||||||||||||.|||||.|||||.||
Sbjct 875 ATGACGAACAATTTCTATGCAGCAATCTTGGGATACGATGAGGGGATCCTTTCAGATGACCATGGCCTGGCTGC 948
Query 684 TGCCCTCTGGAGAACCTTCTTCAACCGGAAATGTGAAGACCCTCGACATCTTGAATTGCTGGTAGAGTATGTGA 757
|||.||||||||.|||||||||||||.|||||||||.|||||||||||.||||||||||||||.||.|||||||
Sbjct 949 TGCGCTCTGGAGGACCTTCTTCAACCAGAAATGTGAGGACCCTCGACAGCTTGAATTGCTGGTGGAATATGTGA 1022
Query 758 GGAAACAGATACAGTACCTGGACTCCATGAACGGGGAGGATCTGCTTCTGACAGGGGAGGTGAGCTGGCGCCCT 831
||||||||||.||.||||||||||||||||||||.|||||||||||.|||||||||||.|||||.|||||||||
Sbjct 1023 GGAAACAGATGCAATACCTGGACTCCATGAACGGTGAGGATCTGCTGCTGACAGGGGAAGTGAGATGGCGCCCT 1096
Query 832 CTAGTGGAGAAGAATCCTCAGAGCATCCTGAAGCCCCATTCTCCGACTTACAACGACGAGGGACTT-------- 897
||.||||||||||||||.||.||||||.|||||||||||.||||.||||||||.||.|||||.|||
Sbjct 1097 CTGGTGGAGAAGAATCCACAAAGCATCTTGAAGCCCCATGCTCCTACTTACAATGATGAGGGCCTTTGAGAGAC 1170
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1171 TGGTCCCTCCGGACAGCTGGCTGGCTGGCTTTGAGGACCTTCCATGGAAGAAGTGCCTGTTTGCCCCAGGACCC 1244
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1245 TGAAGAAGGTGGCCTGAACTGACTTGTGAACAGTACCTGTTGAATACTCAGCCCACTCGTGTTGAGTTTCTTCT 1318
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1319 TCCTGATCTGGTGGGGTTACTGGGGAGGTCCTCTTGCTCTTTGACAGGTCCCCTCCCTCAAGAGAAGCCCCAGG 1392
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1393 CACACTTCCCAAGTCCCCTCAGCACCACACGTGACTGAGAGCTTTTTCCGAAGGCTGAGGAAGGGATGGGTAGG 1466
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1467 TTAGAAGGGGGTGCCTTCACTCAGAAACCCCTGTGCTTGGAGCAGTTTATTAAGTTCCAAAGTCACAGTGGGTA 1540
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1541 ACCATATACTGTTCCCCCTCTGTGAGCCATGGGGTTGAAGTAGCCATTAAAAAGAGAGACTTATTTCTGCCATG 1614
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1615 GTTTTTCTTTGTTCCAAGGTCTTTTAGAAACATAGTTAAAGCCCAGTGTAGTGGTGCATGTCTTTAGTCCAAGT 1688
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1689 ATTTGGGAAGCAGAGGCAGATGACTCTAGCTAGGTTCTAGGTCAGCATGATCTACAGAGTGAATTACAGGGCAG 1762
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1763 GCAGAGCTACACAGAGAAAGCCTGTCTTGAAAAAACAAGAGAAAAGAAAAGTGCAGGTGAGGCCGTGGGTTCTC 1836
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1837 CAAGCTCAGGGAATAACTGCAGCTCAGTTAGAGGCAGCACGGAGAGGAGCGGAGAGGAGAGGAGAGGAGAAGAG 1910
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1911 GCCAGGGGCTCTCTGCTGCTACTCCTGTCCCCAGGTCACAGAGAGGAGTCACTGTCTGGGCAAGGTACAGTCTG 1984
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1985 CCAGGCATGTTCACTGAGATCCAGGAGGTCTCAGGACCAAGGGGCTTGTCACATCCTAAGTCATTTAGAAAGAA 2058
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2059 CAAAAGTCCCTTTGTCACCCACAGTGAACTGGGGAAGGAACACACTCTCCGCACTTGGCCTCTCTTTACGTGAG 2132
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2133 ATACTGTGGCGTGCTGGTACCATCCAAGCCTCGGCCCGGTGTCTATCCCCTCCCCAAGTTCTAAAGCACGGGCT 2206
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2207 GTGATGGGAACTTGAGGGGCCTTTTCTCTCTGGGCACTTGAAGGGTCTGTTCTCTCTCCCCCGAGACTTTGGGT 2280
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2281 CATCTCTTGGAAGGTTTTCTGAAATTGAGGAACGGGGGTGGGGCCCGTCTCCTCCCTCCCTTCCCCCACCCAGC 2354
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2355 TTCCTTCATTGAACTTGCTATAAAATGAGTCATATGAAGAAACCCTATACTGTGAGGTATGCGCCACTTCTGTG 2428
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2429 AAAACATTACAAATCAAGCCGCCTTCTCAGTTTATTTAAGATGCTTTTGTTGCAAGCGGGGCTCTGGAGTGAGG 2502
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2503 CGTCCTCTGTGAGCATGAGATAATAGCACCTTGTAACTCATTACATCTGGGCACTATTTACATAAACCAGAGGC 2576
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2577 GAGCCAGGCAGGGATTTGCTGATTAATTTATTTTTAATGGACTGAAGTATGCCATGCACCAAAATAAACTTTAC 2650
Query 898 --------------------- 897
Sbjct 2651 TGTGTGTACCTAACTGCTCCT 2671
