Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08587
- Subject:
- XM_011543510.3
- Aligned Length:
- 1608
- Identities:
- 989
- Gaps:
- 588
Alignment
Query 1 ATGGAGCATCGCATCGTGGGGCCCGGGCCGTACCGAGCTACCAGGCTGTGGAATGAGACCGTGGAGCTTTTTCG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGCATCGCATCGTGGGGCCCGGGCCGTACCGAGCTACCAGGCTGTGGAATGAGACCGTGGAGCTTTTTCG 74
Query 75 TGCTAAGATGCCGTTACGGAAACATCGCTGTCGTTTCAAGAGCTATGAGCATTGTTTCACAGCGGCCGAAGCTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGCTAAGATGCCGTTACGGAAACATCGCTGTCGTTTCAAGAGCTATGAGCATTGTTTCACAGCGGCCGAAGCTG 148
Query 149 TGGATTGGCTGCATGAGCTGCTGAGGTGCAGTCAAAACTTCGGCCCTGAAGTGACCCGCAAACAAACGGTCCAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGATTGGCTGCATGAGCTGCTGAGGTGCAGTCAAAACTTCGGCCCTGAAGTGACCCGCAAACAAACGGTCCAG 222
Query 223 CTGCTAAAAAAATTCCTGAAGAATCACGTTATTGAAGACATCAAGGGAAAATGGGGTGAGGAAGATTTTGAAGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGCTAAAAAAATTCCTGAAGAATCACGTTATTGAAGACATCAAGGGAAAATGGGGTGAGGAAGATTTTGAAGA 296
Query 297 CAATCGTCACTTATACAGATTTCCTCCTTCTTCACCCCTGAAACCATATCCAAAGAAGCCCCCAAACCAAAAGG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAATCGTCACTTATACAGATTTCCTCCTTCTTCACCCCTGAAACCATATCCAAAGAAGCCCCCAAACCAAAAGG 370
Query 371 ATGTTATTAAATTTCCAGAATGGAATGATCTCCCACCAGGCACTTCACAAGAGAACATCCCAGTGAGGCCAGTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGTTATTAAATTTCCAGAATGGAATGATCTCCCACCAGGCACTTCACAAGAGAACATCCCAGTGAGGCCAGTT 444
Query 445 GTGATGAATTCTGAGATGTGGTACAAGCGTCACAGTATTGCAATTGGAGAGGTGCCAGCTTGCCGTCTTGTCCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTGATGAATTCTGAGATGTGGTACAAGCGTCACAGTATTGCAATTGGAGAGGTGCCAGCTTGCCGTCTTGTCCA 518
Query 519 CCGCAGACAGCTGACAGAGGCCAATGTAGAAGAGATATGGAAGTCTATGACATTATCATACTTACAGAAAATTC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCGCAGACAGCTGACAGAGGCCAATGTAGAAGAGATATGGAAGTCTATGACATTATCATACTTACAGAAAATTC 592
Query 593 TTGGCCTGGATTCCTTAGAAGAAGTTTTAGACGTCAAACTTGTCAATTCGAAGTTCATCATCCATAATGTATAT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTGGCCTGGATTCCTTAGAAGAAGTTTTAGACGTCAAACTTGTCAATTCGAAGTTCATCATCCATAATGTATAT 666
Query 667 AGTGTTAGCAAGCAGGGAGTTGTTATTCTTGATGACAAGTCAAAAGAACTTCCTCATTGGGTGCTGTCAGCTAT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGTGTTAGCAAGCAGGGAGTTGTTATTCTTGATGACAAGTCAAAAGAACTTCCTCATTGGGTGCTGTCAGCTAT 740
Query 741 GAAGTGTTTGGCAAATTGGCCCAACTGTTCTGATTTGAAGCAGCCTATGTACTTGGGATTTGAAAAAGATGTCT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAAGTGTTTGGCAAATTGGCCCAACTGTTCTGATTTGAAGCAGCCTATGTACTTGGGATTTGAAAAAGATGTCT 814
Query 815 TTAAAACCATAGCTGATTACTATGGTCACTTGAAAGAGCCTCTACTTACATTTCATCTTTTTGATGCTTTTGTC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTAAAACCATAGCTGATTACTATGGTCACTTGAAAGAGCCTCTACTTACATTTCATCTTTTTGATGCTTTTGTC 888
Query 889 AGTGTACTGGGTTTG--TTACAGAAGGAGAAAGT-------GGCAGTTGAAG---------CATTTCAGATTTG 944
||||||||||.|.|| ||.||.|.| || ||.||.||.|| || |||..|.||
Sbjct 889 AGTGTACTGGATCTGGTTTCCACATG------GTCCTTGCAGGGAGCTGGAGAGTCCTCCCCA--TCACTTATG 954
Query 945 CTGCCTTCTCCTACCTCCTGAAAATAGGAGAAAGTTACAGCTATTGATGATGATGATGGCAAGGATTTGCTTAA 1018
|| ||||.||| |.|| ||.|.|.|.| ||.|.|.|||
Sbjct 955 CT------------CTCCAGAA-------------TCCA-CTCTGGGTCA---------CATGAAGTTG----- 988
Query 1019 ACAAAGAGATGCCACCCCTGTGTG---ATGGCTTTGGTACCCGAACACTGATGGTTCAGACATTTTCCCGTTGC 1089
|||| |.||||.| |||.|.|| |.||.|| || |||.||.|||| .|
Sbjct 989 ACAA------------CGTGTGGGAACATGTCATT--TCCCTGA-----GA------AGAAATCTTCC----TC 1033
Query 1090 ATCTTGTGTTCCAAGGATGAAGTGGACTTGGATGAGTTATTAGCTGCTAGATTGGTAACGTTTCTGATGGACAA 1163
|| ||.||.
Sbjct 1034 AT-TTCTGC----------------------------------------------------------------- 1041
Query 1164 TTACCAGGAAATTCTGAAACTCCCTTTGGCCTTGCAGACCTCTATAGAGGAGCGTGTGGCTCATCTACGAAGAG 1237
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1238 TCCAGATAAAATACCCAGGAGCTGATATGGATATCACTTTATCTGCTCCATCATTTTGCCGTCAAATTAGTCCA 1311
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1312 GAGGAATTTGAATATCAAAGATCATATGGCTCTCAGGAACCTCTGGCAGCCTTGTTGGAGGAAGTCATAACAGA 1385
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1386 TGCCAAACTCTCCAACAAAGAGAAAAAGAAGAAACTGAAGCAGTTTCAGAAATCCTATCCTGAAGTCTATCAAG 1459
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1460 AACGATTTCCTACACCAGAAAGTGCAGCACTTCTGTTTCCTGAAAAACCCAAACCGAAACCACAGCTGCTAATG 1533
Sbjct 1042 -------------------------------------------------------------------------- 1041
Query 1534 TGGGCACTAAAGAAGCCTTTCCAACCATTTCAAAGAACTAGAAGTTTTCGAATG 1587
Sbjct 1042 ------------------------------------------------------ 1041