Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08587
- Subject:
- XM_017009629.2
- Aligned Length:
- 1597
- Identities:
- 969
- Gaps:
- 617
Alignment
Query 1 ATGGAGCATCGCATCGTGGGGCCCGGGCCGTACCGAGCTACCAGGCTGTGGAATGAGACCGTGGAGCTTTTTCG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGCATCGCATCGTGGGGCCCGGGCCGTACCGAGCTACCAGGCTGTGGAATGAGACCGTGGAGCTTTTTCG 74
Query 75 TGCTAAGATGCCGTTACGGAAACATCGCTGTCGTTTCAAGAGCTATGAGCATTGTTTCACAGCGGCCGAAGCTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGCTAAGATGCCGTTACGGAAACATCGCTGTCGTTTCAAGAGCTATGAGCATTGTTTCACAGCGGCCGAAGCTG 148
Query 149 TGGATTGGCTGCATGAGCTGCTGAGGTGCAGTCAAAACTTCGGCCCTGAAGTGACCCGCAAACAAACGGTCCAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGATTGGCTGCATGAGCTGCTGAGGTGCAGTCAAAACTTCGGCCCTGAAGTGACCCGCAAACAAACGGTCCAG 222
Query 223 CTGCTAAAAAAATTCCTGAAGAATCACGTTATTGAAGACATCAAGGGAAAATGGGGTGAGGAAGATTTTGAAGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGCTAAAAAAATTCCTGAAGAATCACGTTATTGAAGACATCAAGGGAAAATGGGGTGAGGAAGATTTTGAAGA 296
Query 297 CAATCGTCACTTATACAGATTTCCTCCTTCTTCACCCCTGAAACCATATCCAAAGAAGCCCCCAAACCAAAAGG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAATCGTCACTTATACAGATTTCCTCCTTCTTCACCCCTGAAACCATATCCAAAGAAGCCCCCAAACCAAAAGG 370
Query 371 ATGTTATTAAATTTCCAGAATGGAATGATCTCCCACCAGGCACTTCACAAGAGAACATCCCAGTGAGGCCAGTT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGTTATTAAATTTCCAGAATGGAATGATCTCCCACCAGGCACTTCACAAGAGAACATCCCAGTGAGGCCAGTT 444
Query 445 GTGATGAATTCTGAGATGTGGTACAAGCGTCACAGTATTGCAATTGGAGAGGTGCCAGCTTGCCGTCTTGTCCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GTGATGAATTCTGAGATGTGGTACAAGCGTCACAGTATTGCAATTGGAGAGGTGCCAGCTTGCCGTCTTGTCCA 518
Query 519 CCGCAGACAGCTGACAGAGGCCAATGTAGAAGAGATATGGAAGTCTATGACATTATCATACTTACAGAAAATTC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCGCAGACAGCTGACAGAGGCCAATGTAGAAGAGATATGGAAGTCTATGACATTATCATACTTACAGAAAATTC 592
Query 593 TTGGCCTGGATTCCTTAGAAGAAGTTTTAGACGTCAAACTTGTCAATTCGAAGTTCATCATCCATAATGTATAT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTGGCCTGGATTCCTTAGAAGAAGTTTTAGACGTCAAACTTGTCAATTCGAAGTTCATCATCCATAATGTATAT 666
Query 667 AGTGTTAGCAAGCAGGGAGTTGTTATTCTTGATGACAAGTCAAAAGAACTTCCTCATTGGGTGCTGTCAGCTAT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGTGTTAGCAAGCAGGGAGTTGTTATTCTTGATGACAAGTCAAAAGAACTTCCTCATTGGGTGCTGTCAGCTAT 740
Query 741 GAAGTGTTTGGCAAATTGGCCCAACTGTTCTGATTTGAAGCAGCCTATGTACTTGGGATTTGAAAAAGATGTCT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAAGTGTTTGGCAAATTGGCCCAACTGTTCTGATTTGAAGCAGCCTATGTACTTGGGATTTGAAAAAGATGTCT 814
Query 815 TTAAAACCATAGCTGATTACTATGGTCACTTGAAAGAGCCTCTACTTACATTTCATCTTTTTGATGCTTTTGTC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTAAAACCATAGCTGATTACTATGGTCACTTGAAAGAGCCTCTACTTACATTTCATCTTTTTGATGCTTTTGTC 888
Query 889 AGTGTACTGGGTTTGTTACAGAAGGAGAAAGTGGCAGTTGAAGCATTTCAGATTTGCTGCCTTCTCCTACC--T 960
|||||||||| .||..||| |.||| |||.|| .|||||| |
Sbjct 889 AGTGTACTGG------CACTCAAG----ATGTG------GAATCA-------------------ACCTACCTGT 927
Query 961 CCTGAAAATAGGAGAAAGTTACAGCTATTGATGATGATGATGGCAAGGATTTGCTTAAACAAAGAGATGCCACC 1034
|| |||| ||| |||||.|| || ||||.||| |||
Sbjct 928 CC-------AGGA-------ACA------GATGAAGA-GA---------------TAAAGAAA---ATG----- 957
Query 1035 CCTGTGTG-ATGGCTTTGGTACCCGAACACTGATGG-------TTCAGACATTTTCCCGTTGCATCTTGTGTTC 1100
|.||||| || ||||.| ||| |||| .||
Sbjct 958 -CAGTGTGTAT---------------ACACAG-TGGAATGCTCTTCA-CCA----------------------- 990
Query 1101 CAAGGATGAAGTGGACTTGGATGAGTTATTAGCTGCTAGATTGGTAACGTTTCTGATGGACAATTACCAGGAAA 1174
Sbjct 991 -------------------------------------------------------------------------- 990
Query 1175 TTCTGAAACTCCCTTTGGCCTTGCAGACCTCTATAGAGGAGCGTGTGGCTCATCTACGAAGAGTCCAGATAAAA 1248
Sbjct 991 -------------------------------------------------------------------------- 990
Query 1249 TACCCAGGAGCTGATATGGATATCACTTTATCTGCTCCATCATTTTGCCGTCAAATTAGTCCAGAGGAATTTGA 1322
Sbjct 991 -------------------------------------------------------------------------- 990
Query 1323 ATATCAAAGATCATATGGCTCTCAGGAACCTCTGGCAGCCTTGTTGGAGGAAGTCATAACAGATGCCAAACTCT 1396
Sbjct 991 -------------------------------------------------------------------------- 990
Query 1397 CCAACAAAGAGAAAAAGAAGAAACTGAAGCAGTTTCAGAAATCCTATCCTGAAGTCTATCAAGAACGATTTCCT 1470
Sbjct 991 -------------------------------------------------------------------------- 990
Query 1471 ACACCAGAAAGTGCAGCACTTCTGTTTCCTGAAAAACCCAAACCGAAACCACAGCTGCTAATGTGGGCACTAAA 1544
Sbjct 991 -------------------------------------------------------------------------- 990
Query 1545 GAAGCCTTTCCAACCATTTCAAAGAACTAGAAGTTTTCGAATG 1587
Sbjct 991 ------------------------------------------- 990