Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08587
- Subject:
- XR_948274.3
- Aligned Length:
- 1638
- Identities:
- 1057
- Gaps:
- 547
Alignment
Query 1 ------------------------------------------ATGGAGCATCGCATCGTGGGGCCCGGGCCGTA 32
||||||||||||||||||||||||||||||||
Sbjct 1 GATCAGCGCTGGCGCGGCTGCGGCCGCTGCTGCCTACGCGCCATGGAGCATCGCATCGTGGGGCCCGGGCCGTA 74
Query 33 CCGAGCTACCAGGCTGTGGAATGAGACCGTGGAGCTTTTTCGTGCTAAGATGCCGTTACGGAAACATCGCTGTC 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCGAGCTACCAGGCTGTGGAATGAGACCGTGGAGCTTTTTCGTGCTAAGATGCCGTTACGGAAACATCGCTGTC 148
Query 107 GTTTCAAGAGCTATGAGCATTGTTTCACAGCGGCCGAAGCTGTGGATTGGCTGCATGAGCTGCTGAGGTGCAGT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTTTCAAGAGCTATGAGCATTGTTTCACAGCGGCCGAAGCTGTGGATTGGCTGCATGAGCTGCTGAGGTGCAGT 222
Query 181 CAAAACTTCGGCCCTGAAGTGACCCGCAAACAAACGGTCCAGCTGCTAAAAAAATTCCTGAAGAATCACGTTAT 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAAAACTTCGGCCCTGAAGTGACCCGCAAACAAACGGTCCAGCTGCTAAAAAAATTCCTGAAGAATCACGTTAT 296
Query 255 TGAAGACATCAAGGGAAAATGGGGTGAGGAAGATTTTGAAGACAATCGTCACTTATACAGATTTCCTCCTTCTT 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGAAGACATCAAGGGAAAATGGGGTGAGGAAGATTTTGAAGACAATCGTCACTTATACAGATTTCCTCCTTCTT 370
Query 329 CACCCCTGAAACCATATCCAAAGAAGCCCCCAAACCAAAAGGATGTTATTAAATTTCCAGAATGGAATGATCTC 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACCCCTGAAACCATATCCAAAGAAGCCCCCAAACCAAAAGGATGTTATTAAATTTCCAGAATGGAATGATCTC 444
Query 403 CCACCAGGCACTTCACAAGAGAACATCCCAGTGAGGCCAGTTGTGATGAATTCTGAGATGTGGTACAAGCGTCA 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCACCAGGCACTTCACAAGAGAACATCCCAGTGAGGCCAGTTGTGATGAATTCTGAGATGTGGTACAAGCGTCA 518
Query 477 CAGTATTGCAATTGGAGAGGTGCCAGCTTGCCGTCTTGTCCACCGCAGACAGCTGACAGAGGCCAATGTAGAAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAGTATTGCAATTGGAGAGGTGCCAGCTTGCCGTCTTGTCCACCGCAGACAGCTGACAGAGGCCAATGTAGAAG 592
Query 551 AGATATGGAAGTCTATGACATTATCATACTTACAGAAAATTCTTGGCCTGGATTCCTTAGAAGAAGTTTTAGAC 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGATATGGAAGTCTATGACATTATCATACTTACAGAAAATTCTTGGCCTGGATTCCTTAGAAGAAGTTTTAGAC 666
Query 625 GTCAAACTTGTCAATTCGAAGTTCATCATCCATAATGTATATAGTGTTAGCAAGCAGGGAGTTGTTATTCTTGA 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTCAAACTTGTCAATTCGAAGTTCATCATCCATAATGTATATAGTGTTAGCAAGCAGGGAGTTGTTATTCTTGA 740
Query 699 TGACAAGTCAAAAGAACTTCCTCATTGGGTGCTGTCAGCTATGAAGTGTTTGGCAAATTGGCCCAACTGTTCTG 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGACAAGTCAAAAGAACTTCCTCATTGGGTGCTGTCAGCTATGAAGTGTTTGGCAAATTGGCCCAACTGTTCTG 814
Query 773 ATTTGAAGCAGCCTATGTACTTGGGATTTGAAAAAGATGTCTTTAAAACCATAGCTGATTACTATGGTCACTTG 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATTTGAAGCAGCCTATGTACTTGGGATTTGAAAAAGATGTCTTTAAAACCATAGCTGATTACTATGGTCACTTG 888
Query 847 AAAGAGCCTCTACTTACATTTCATCTTTTTGATGCTTTTGTCAGTGTACTGGGTTTGTTACAGAAGGAGAAAGT 920
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAAGAGCCTCTACTTACATTTCATCTTTTTGATGCTTTTGTCAGTGTACTGG---------------------- 940
Query 921 GGCAGTTGAAGCATTTCAGATTTGCTGCCTTCTCCTACCTCCTGAAAATAGGAGAA-AG-TTACAGCTATTGAT 992
|.||||..||| |||| || || |||.||||.
Sbjct 941 ------------------------------------AGCTCCCAAAA-----AGAATAGCTT---GCTCTTGAC 970
Query 993 GATGATGATGGCAAGGATTTGCTTAAACAAAGAGATGCCACCCCTGTGTGATGGCTTTGGTACCCGAACACTGA 1066
|.||...||| ||| ||| ||| |||
Sbjct 971 GTTGTACATG------------TTA--------------------GTG-----------------GAA---TGA 992
Query 1067 TGGTTCA-GAC-ATTTTCCCGTTGCATCTTGTGTTCCAAGGATGAAGTGGACTTGGATGAGTTATTAGCTGCTA 1138
||| ||| |.| ||.|||.|||||| |
Sbjct 993 ----TCAGGACTACT------------------TTGCAAAGATGAA---------------------------A 1017
Query 1139 GATTGGTAACGTTTCTGATGGACAATTACCAGGAAATTCTGAAACTCCCTTTGGCCTTGCAGACCTCTATAGAG 1212
.|||.|| ||||||..|| ||| ||||| |||||
Sbjct 1018 AATTTGT---GTTTCTAGTG----ATT------------TGAAA------------------------ATAGA- 1047
Query 1213 GAGCGTGTGGCTCATCTACGAAGAGTCCAGATAAAATACCCAGGAGCTGATATGGATATCACTTTATCTGCTCC 1286
.|||| |||.|.|||
Sbjct 1048 ------------AATCT-------------------------------------GATGTAACT----------- 1061
Query 1287 ATCATTTTGCCGTCAAATTAGTCCAGAGGAATTTGAATAT---CAAAGATCATATGGCTCTCAGGAACCTCTG- 1356
||||| |||| .||||| ||| ||
Sbjct 1062 ----------------ATTAG---------------ATATTGGGAAAGA-------------AGG------TGA 1085
Query 1357 -GCAGCCTTGTTGGAGGAAGTCATAACAGATGCCAAACTCTCCAACAAAGAGAAAAAGAAGAAACTGAAGCAGT 1429
|.||..||||| |||||.| ||.||||..|.|..||||||| |
Sbjct 1086 CGAAGGTTTGTT-------------ACAGAAG-------------------GAGAAAGTGGCAGTTGAAGCA-T 1126
Query 1430 TTCAGAAATCCTATCCTGAAGTCTATCAAGAACGATTTCCTACACCAGAAAGTGCAGCACTTCTGTTTCCTGAA 1503
||||||..|.|| .|||
Sbjct 1127 TTCAGATTTGCT-GCCT--------------------------------------------------------- 1142
Query 1504 AAACCCAAACCGAAACCACAGCTGCTAATGTGGGCACTAAAGAAGCCTTTCCAACCATTTCAAAGAACTAGAAG 1577
Sbjct 1143 -------------------------------------------------------------------------- 1142
Query 1578 TTTTCGAATG 1587
Sbjct 1143 ---------- 1142
