Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08936
Subject:
NM_001038624.1
Aligned Length:
1111
Identities:
964
Gaps:
17

Alignment

Query    1  ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAA  74
            ||||||||||||||.|||||||||||.||.|||||.||.|||||.||||||||..|||||||||||||||||||
Sbjct    1  ATGGCGTACTCCACGGTGCAGAGAGTGGCGCTGGCCTCGGGGCTCGTCCTGGCCGTGTCGCTGCTGCTGCCCAA  74

Query   75  GGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGACACCTGAAGGAAAATTGGGCCGATTTCCACCTA  148
            |||||||.||||.|||||||||||.|.|||||||||||||...||.|||||||||||||.||||||||||||||
Sbjct   75  GGCCTTCTTGTCTCGCGGGAAGCGACCGGAGCCGCCGCCGGGCCCGGAAGGAAAATTGGACCGATTTCCACCTA  148

Query  149  TGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAG  222
            ||||||||||.|||..|||||.|||||||||.|||||.||.|||||||||||||||||||||||||||||.|||
Sbjct  149  TGATGCATCACCACTCGGCACCCTCAGATGGTCAGACACCAGGGGCTCGTTTCCAGAGGTCTCACCTTGCAGAG  222

Query  223  GCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGAGGAGGTAGTGGAAGAGGTCTGATGGGGCAGAT  296
            ||.||||||||||||||.|||.||||||||||||||||||||||.||||||||||||||.||||||||.|||||
Sbjct  223  GCCTTTGCAAAGGCCAAGGGAGCAGGTGGAGGTGCTGGAGGAGGGGGTAGTGGAAGAGGACTGATGGGCCAGAT  296

Query  297  TATTCCGATCTACGGTTTTGGGATTTTTTTATATATACTGTACATTCTATTTAAGCTCTCAAAGGGGAAAACAA  370
            .|||||.|||||.||.||||||||.|||||.||.||||||||||||.|.||||||||.|||||||||||   ||
Sbjct  297  CATTCCAATCTATGGCTTTGGGATCTTTTTGTACATACTGTACATTTTGTTTAAGCTTTCAAAGGGGAA---AA  367

Query  371  CTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACAGGAAAATTACCAGTTTTGAGCTTGCT  444
            |||||||||||.||||.||||..||||||...|||||||||.||||||||||.|||||||..||||||||||.|
Sbjct  368  CTGCAGAGGATCGGAACTGCTCCACTGCCCCACCTGGAAACGCCCACAGGAAGATTACCAACTTTGAGCTTGTT  441

Query  445  CAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAAAAATTATTCAACAGAGTGGGACCTAATGGTGA  518
            |||||.|||||||||||.||.||||||||||.||||||||||||||||.||||||||||.||||||||||||||
Sbjct  442  CAACTACAAGAAAAACTAAAAGAGACAGAAGAAGCCATGGAAAAATTAATCAACAGAGTTGGACCTAATGGTGA  515

Query  519  G---AGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCA  589
            |   |||||||||.|||||||||||||||||||||||||.||.||.||||||||||||||||||||||||||||
Sbjct  516  GAGCAGAGCACAGGCTGTGACTTCTGACCAAGAGAAACGATTACTGCATCAGCTCCGAGAAATCACCAGGGTCA  589

Query  590  TGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGG  663
            ||||||||||.||.|||||.||||.|   |||||||||||.|||||||||||.|||||.|||||||||||||||
Sbjct  590  TGAAAGAAGGCAAGTTCATCGACACA---TCTCCAGAGAAGGAAGCTGAGGAAGCCCCATACATGGAGGACTGG  660

Query  664  GAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTT  737
            |||||||||||.|||||||||||.|||||.|||||||||||.||..||||||||||||||||||||||||||.|
Sbjct  661  GAAGGTTACCCAGAAGAGACTTATCCAATATATGACCTTTCGGATGGTATCAAGCGTAGGCAAGAAACAATCCT  734

Query  738  GGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAG  811
            |||||||||||||||||.||||||.|..||||||||||||||.||||||..|||||||..||||||||||||||
Sbjct  735  GGTGGATTACCCTGACCTAAAAGAGCCCTCTGCTGAAGAAATTGCTGAACAAATGGGAGAGATAGAAGAGGAAG  808

Query  812  AATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGT  885
            .||||||.|.||||.|.|||||...|.|||||||||||||..||||||||.||||||||||||||.||.|||||
Sbjct  809  GATCAGAGCGTTTGAGCTGGGATCATTTGCCCACTGACCCTGGAGCCCAGAAAGATAATTCTGTTGCCCCGTGT  882

Query  886  GATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGG  959
            |||||.||.||||||.||||.|||||||||.||||||||||.||||||||||||||||||||||||||||||||
Sbjct  883  GATCCCAAACCAGAATCATGCTCCTGCTGTGTTCATGAAGAGGAGGATCCTGCTGTCTTGGCAGAGAATGCTGG  956

Query  960  ATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAG  1033
            .||||||||||||.|||||..|||||||||||||.|||||||.|||.|.|.|.||||.|||||||.|.||||||
Sbjct  957  TTTCAGTGCAGATGGCTACAGTGAGCAAGAGGAAGCCACCAAGGAAAACTTGCCCCAGGACTTTACAAATGAAG  1030

Query 1034  GGTTGGGCATCAGCACAGATAAAGCATATACA----GGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGA  1103
            ||.||||..|||||||.|||||.||    |||    ||..|.|||.||||||||||.||||||||||||||.||
Sbjct 1031  GGCTGGGAGTCAGCACTGATAATGC----ACACGTGGGTGGTATGTTGAGGAAGCGCAACCCCCAGGGTTTTGA  1100

Query 1104  G  1104
            |
Sbjct 1101  G  1101

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.