Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08936
Subject:
NM_001135109.4
Aligned Length:
1104
Identities:
560
Gaps:
543

Alignment

Query    1  ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAA  74

Query   75  GGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGACACCTGAAGGAAAATTGGGCCGATTTCCACCTA  148
            ||||||||||||||||||||||||||||||||||||||||||||||                            
Sbjct   75  GGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGACACCT----------------------------  120

Query  149  TGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAG  222
                                                                                      
Sbjct  121  --------------------------------------------------------------------------  120

Query  223  GCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGAGGAGGTAGTGGAAGAGGTCTGATGGGGCAGAT  296
                                                                                      
Sbjct  121  --------------------------------------------------------------------------  120

Query  297  TATTCCGATCTACGGTTTTGGGATTTTTTTATATATACTGTACATTCTATTTAAGCTCTCAAAGGGGAAAACAA  370
                                                                                      
Sbjct  121  --------------------------------------------------------------------------  120

Query  371  CTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACAGGAAAATTACCAGTTTTGAGCTTGCT  444
                                                                                      
Sbjct  121  --------------------------------------------------------------------------  120

Query  445  CAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAAAAATTATTCAACAGAGTGGGACCTAATGGTGA  518
                                                                                      
Sbjct  121  --------------------------------------------------------------------------  120

Query  519  GAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGA  592
                                                                                      
Sbjct  121  --------------------------------------------------------------------------  120

Query  593  AAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAA  666
                                                                                   |||
Sbjct  121  -----------------------------------------------------------------------GAA  123

Query  667  GGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  124  GGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGT  197

Query  741  GGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAAT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  198  GGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAAT  271

Query  815  CAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGAT  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  272  CAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGAT  345

Query  889  CCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  346  CCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATT  419

Query  963  CAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  420  CAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGT  493

Query 1037  TGGGCATCAGCACAGATAAAGCATATACAGGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAG  1104
            |||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  494  TGGGCATCAGCACCGATAAAGCATATACAGGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAG  561