Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08936
- Subject:
- NM_001346690.2
- Aligned Length:
- 1116
- Identities:
- 606
- Gaps:
- 507
Alignment
Query 1 ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGACACCTGAAGGAAAATTGGGCCGATTTCCACCTA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGAGGAGGTAGTGGAAGAGGTCTGATGGGGCAGAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TATTCCGATCTACGGTTTTGGGATTTTTTTATATATACTGTACATTCTATTTAAGCTCTCAAAGGGGAAAACAA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACAGGAAAATTACCAGTTTTGAGCTTGCT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CAACTGCAAGAAAAA--------CTGAAGGAGACAGAAGCAGCCATGGAAAAATTATTCAACAGAGTGGGACCT 510
| ||||| |||||| |||||
Sbjct 1 --------------ATGTGCCGCCTGAA-GAGACA---------------------------AGAGT------- 25
Query 511 AATGGTGA----GAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTTGCTACATCAGCTCCGAGAAATCA 580
|.|||| .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 26 --TTGTGATAAGCAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTTGCTACATCAGCTCCGAGAAATCA 97
Query 581 CCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAGAAGCTGAGGAGGCCCCTTACATG 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 98 CCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAGAAGCTGAGGAGGCCCCTTACATG 171
Query 655 GAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGTATCAAGCGTAGGCAAGA 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 172 GAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGACTGTATCAAGCGTAGGCAAGA 245
Query 729 AACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAGCTGAAAGAATGGGAATGATAG 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 246 AACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAGCTGAAAGAATGGGAATGATAG 319
Query 803 AAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCCAGGAAGATAATTCTGTT 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 320 AAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCCAGGAAGATAATTCTGTT 393
Query 877 ACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 394 ACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAGA 467
Query 951 GAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCAAGACTTTA 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 468 GAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCAAGACTTTA 541
Query 1025 AAGATGAAGGGTTGGGCATCAGCACAGATAAAGCATATACAGGCAGCATGCTGAGGAAGCGTAACCCCCAGGGT 1098
|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 542 AAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCATGCTGAGGAAGCGTAACCCCCAGGGT 615
Query 1099 TTAGAG 1104
||||||
Sbjct 616 TTAGAG 621
