Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08936
Subject:
NM_178780.3
Aligned Length:
1108
Identities:
606
Gaps:
428

Alignment

Query    1  ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAA  74
            ||||||||||||||.|||||||||||.||.|||||.||.|||||.||||||||..|||||||||||||||||||
Sbjct    1  ATGGCGTACTCCACGGTGCAGAGAGTGGCGCTGGCCTCGGGGCTCGTCCTGGCCGTGTCGCTGCTGCTGCCCAA  74

Query   75  GGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGACACCTGAAGGAAAATTGGGCCGATTTCCACCTA  148
            |||||||.||||.|||||||||||.|.|||||||||||||...||.|||||||||||||.||||||||||||||
Sbjct   75  GGCCTTCTTGTCTCGCGGGAAGCGACCGGAGCCGCCGCCGGGCCCGGAAGGAAAATTGGACCGATTTCCACCTA  148

Query  149  TGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAG  222
            ||||||||||.|||..|||||.|||||||||.|||||.||.|||||||||||||||||||||||||||||.|||
Sbjct  149  TGATGCATCACCACTCGGCACCCTCAGATGGTCAGACACCAGGGGCTCGTTTCCAGAGGTCTCACCTTGCAGAG  222

Query  223  GCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGAGGAGGTAGTGGAAGAGGTCTGATGGGGCAGAT  296
            ||.||||||||||||||.|||.||||||||||||||||||||||.||||||||||||||.||||||||.|||||
Sbjct  223  GCCTTTGCAAAGGCCAAGGGAGCAGGTGGAGGTGCTGGAGGAGGGGGTAGTGGAAGAGGACTGATGGGCCAGAT  296

Query  297  TATTCCGATCTACGGTTTTGGGATTTTTTTATATATACTGTACATTCTATTTAAGCTCTCAAAGGGGAAAACAA  370
            .|||||.|||||.||.||||||||.|||||.||.||||||||||||.|.||||||||.|||||||||||   ||
Sbjct  297  CATTCCAATCTATGGCTTTGGGATCTTTTTGTACATACTGTACATTTTGTTTAAGCTTTCAAAGGGGAA---AA  367

Query  371  CTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACACCCACAGGAAAATTACCAGTTTTGAGCTTGCT  444
            |||||||||||.||||.||||..||||||...|||||||||.||||||||||.|||||||..||||||||||.|
Sbjct  368  CTGCAGAGGATCGGAACTGCTCCACTGCCCCACCTGGAAACGCCCACAGGAAGATTACCAACTTTGAGCTTGTT  441

Query  445  CAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAAAAATTATTCAACAGAGTGGGACCTAATGGTGA  518
            |||||.|||||||||||.||.||||||||||.||||||||||||||||.||||||||||.||||||||||||||
Sbjct  442  CAACTACAAGAAAAACTAAAAGAGACAGAAGAAGCCATGGAAAAATTAATCAACAGAGTTGGACCTAATGGTGA  515

Query  519  G---AGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCA  589
            |   |||||||||.|||||||||||||||||||||||||.||.||.||||||||||||||||||||||||||||
Sbjct  516  GAGCAGAGCACAGGCTGTGACTTCTGACCAAGAGAAACGATTACTGCATCAGCTCCGAGAAATCACCAGGGTCA  589

Query  590  TGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGG  663
            ||||||||||.||.|||||.||||.|   |||||||||||.|||||||||||.|||||.|||||||||||||||
Sbjct  590  TGAAAGAAGGCAAGTTCATCGACACA---TCTCCAGAGAAGGAAGCTGAGGAAGCCCCATACATGGAGGACTGG  660

Query  664  GAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTCAGAC-TGTATCAAGCGTAGGCAAGAAACAATCT  736
            ||||||.|                      .|||.||.|||   | |||                         
Sbjct  661  GAAGGTAA----------------------AATGCCCCTTC---CTTGT-------------------------  684

Query  737  TGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAA  810
                                                                                      
Sbjct  685  --------------------------------------------------------------------------  684

Query  811  GAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTG  884
                                                                                      
Sbjct  685  --------------------------------------------------------------------------  684

Query  885  TGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTG  958
                                                                                      
Sbjct  685  --------------------------------------------------------------------------  684

Query  959  GATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAA  1032
                                                                                      
Sbjct  685  --------------------------------------------------------------------------  684

Query 1033  GGGTTGGGCATCAGCACAGATAAAGCATATACAGGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAG  1104
                                                                                    
Sbjct  685  ------------------------------------------------------------------------  684