Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08936
- Subject:
- NR_144497.2
- Aligned Length:
- 5785
- Identities:
- 706
- Gaps:
- 5078
Alignment
Query 1 ------------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTC 38
||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCTGGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTC 74
Query 39 TGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGC 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TGGGCTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGC 148
Query 113 CGACACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACACTCAGATGGCCAGACT 186
||||||||||
Sbjct 149 CGACACCTGA---------------------------------------------------------------- 158
Query 187 CCTGGGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGG 260
Sbjct 159 -------------------------------------------------------------------------- 158
Query 261 AGGAGGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCGATCTACGGTTTTGGGATTTTTTTATATATAC 334
Sbjct 159 -------------------------------------------------------------------------- 158
Query 335 TGTACATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGA 408
Sbjct 159 -------------------------------------------------------------------------- 158
Query 409 AACACCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCAT 482
Sbjct 159 -------------------------------------------------------------------------- 158
Query 483 GGAAAAATTATTCAACAGAGTGGGACCTAATGGTGAGAGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGT 556
|||||||||||||||||||||||||||||||||||||
Sbjct 159 -------------------------------------AGAGCACAGACTGTGACTTCTGACCAAGAGAAACGGT 195
Query 557 TGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAA 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 196 TGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCTCCAGAGAAA 269
Query 631 GAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTC 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 270 GAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTATGACCTTTC 343
Query 705 AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAA 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 344 AGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTGCTGAAGAAA 417
Query 779 TAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCC 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 TAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCCACTGACCCC 491
Query 853 AGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGA 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 492 AGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTTTCATGAAGA 565
Query 927 CGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 566 CGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGGAAACCACCA 639
Query 1001 AAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACAGATAAAGCATATACAGGCAGCATG 1074
|||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 640 AAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACAGGCAGCATG 713
Query 1075 CTGAGGAAGCGTAACCCCCAGGGTTTAGAG-------------------------------------------- 1104
||||||||||||||||||||||||||||||
Sbjct 714 CTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAGTCCCAAGGT 787
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 788 GACCTCTCTCTCCTCAGATTTCCTTCTTGGCCCTGTGCCCTGCACTTTCTTCACTGTGTTCAAGTGTCATAGCT 861
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 862 ATCAGGCCACTATCATGGATATCATGTATCCTTCCTGGTGCTCACACACCTGTCACCTTGTAAAACACGGACAT 935
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 936 TAGTGTGAACACAGGACAGCTTCGCTCTTTCTCTTCCTGCCTTTCCTCTATCAGAGAAGTTGATCCATTAAGTA 1009
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1010 ATTATGTTTGGTCTATTGTAATTACAGATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAA 1083
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1084 CAGATAGTTCACCTGTGAACGAACATCAGCTTACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAG 1157
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1158 ACTCCAAGATCCCTTATTCTTTGGGCCTTGAGCAGGTTAGTAGTCCCCTGGTGAGAAGAGAACATTTTGTTTGT 1231
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1232 GGGGCTAATGGGCCCAGAGGAGGGTAAGACTCTGCTGTCTAAGCTGAAGCCTCTTCCTCGCAGCGAGGGTCTTC 1305
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1306 CTAGGAACATTGATGCTGCCTCAGACATCCTCTTTTCTCCAGAGTAGGGAAGACTCCCACTGATCTGAGAATGA 1379
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1380 GCCCAGAGGCTTGTTTGGGGACTGTTTTACTCTGATACTACCTGGATATCTAGCTTCCTTTACCCCTGTTCTGC 1453
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1454 TTAACAGAACTGCCAAGCCCAGAAGTACCTTTGCACTCCTGGTTTTCAGTGGACAGAGGAAGCTTTAGATAGAG 1527
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1528 ACTTTAGACCCTGCCCTGCAGAGTCAAGACTTGAGGCCATTGAAGCTGCAGGAAGCCCTGCCCAGGGATGGTCC 1601
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1602 TGCCATGAGGAGGCTGCAACCCTATAAGAGGGCTCAAGATTGTGAATTCTGCTCCTGCCATGAGGAGCTCAGAA 1675
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1676 GGCCAGGAAGCCAGCAATAGGGGAGAGAATCTGTGTGCTTATGGACAGTCCTTACCTAAAGCTGTTTCTGAATG 1749
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1750 TTGCACCCTTTGAGAAATTTCTTCTCAGAACCATAAATTGAAACAAATGAGGACTGATCTTGTATACAAAGTGC 1823
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1824 CAACTCAAGAGGGAAGTTGGAGTATGTCTGTTGCAGAGAACCAATATAGCAGTGCCCAGGGGTAGAGACCATGT 1897
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1898 GTTCCATACTCGGATATTTGGGTCTTTTTGAGAGAGCTGGGGAAAGTAGCAGCAACTAGATTAAGACTGGGAGG 1971
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1972 ATTTTGACCAAACTAAAGGCCTTTTCTCCTTACTGCATCTGACGTGTGTCTTCTTGAGACAAGATAGCACCCAT 2045
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2046 GAATTACATCATGAGGTATGTGTGAATTCAGTTTACATGTAAGACCTGAGAGTTCGAAGAGGGCACATTCCCAA 2119
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2120 AGACATTCCCAGTCATGAAATGTAGAAGACTGGAAAATTAAGACATTATGTAAAGGTAGATATGGCTTTTAGAG 2193
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2194 TTACATTATGCTTGGCATGAATAAGGTGCCAGGAAAACAGTTTAAAATTATACATCAGCATACAGACTGCTGTT 2267
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2268 AGAAGGTATGGGATCATATTAAGATAATCTGTCAGCTACTACTAGGCATTTATTGTTAATTGAGTTACAGAAAG 2341
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2342 TCATTCAAGACTGAGTTTATAGAAAGCATATTGCATCTATCTCTGTGTAGAACATTTGATTCACATTGTGAAGA 2415
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2416 ATGCAGTTTAAAATATACTGAATGCAATCTAGATGTATTGTACACGAAAGGTGAAAAATAACAGGTGCTCTTTA 2489
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2490 CTGTTTAGATAAATTGTTTTCTGTGTTATTTCCCTTCGTTCACTGTGAGGGGTTGATTCATGAGGAGAGCCCTG 2563
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2564 GGTTCCTGGCTCAGGTTTACTTTTGGCCTTAGGATAGGATTCCCTTATTAGAGATAAATACTGCTGTTCTCTTC 2637
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2638 TAGCTCATTCATTCATTTAGCAGTCAATTGCTCAGTGCCAGGTGCTAGGAACAGAGGCTCAATCTCTACCCTCA 2711
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2712 GAAAACTCAGTGTGACGAGAGAGAGCCTGACAGATAAAATGAACTATGACCCTGTAAGAGGGCTCAGGATCGTG 2785
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2786 AATCCTGCAGGCAGAGAAACATGAGCCATAATCTGTCCCTGCATTTTCTAGCTGTGGAATCTTGGGTCAGCTCC 2859
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2860 TTAACTGGTCTGAGCTTTGGCTTCAGGGTAGTAAAGGGAGGGGTATTAAAGGTCCTGGTTAAATGAAATCATCA 2933
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2934 GTGTGTGTAAAACAGCATTGGTTCTAGCTCATACATGATAACCACTCATTAAGTGGTAATTATGTTTTTATTAT 3007
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3008 AAGGGCTATGCTGTAATTCAGACATGGGCCCAAAACTACAGGAAAGATAAATTGTTTTTGCTAAAGTATTGCCA 3081
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3082 AGAAACTTCACAGTTTCTTGGGAGGTGGGCCTTGAGGCATGCAAAGAACTTCTTCAGGTAGGCAAAGAAGAGAG 3155
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3156 GACACTCTTGGCAGAAAGAGTTGTTGAAAAAAGCAGTAGGGTGTGAAAATACATGGATGTTCAAGTATTTTGGT 3229
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3230 GAGGCTGTTATGTAAAGTGTTGTTGGTCTTTGGGGAAAATTGGCTTATGGAAATTCCTGCCAGAAGTACTAAGC 3303
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3304 CCTTATGGTGGTTCTTCCTGCCCTAGCTCTTGGTTGGTTTATATATAAGGAATATATTTGTGTATTTATATATC 3377
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3378 AGACATTTGGATGTACCTTTCAGTTATTTAGGATTTAGAAAATTCTTTTTGGATTTTCCAGAATTATTTTATCC 3451
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3452 TTCGGGGATGACAGTTATATGTGTATATACAACCCAGGATGACAAAATCATGGGTCCGGTTTTTGTTGCCAGGG 3525
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3526 CTGCTGTCTCTTTTCTTGCGGTCTTCATTTCTCACGAGGGTGCTGGGAACTTGATCAGTCCCCTGGCCTTTTGG 3599
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3600 CACTGTGGCAGAGTACACAAGTCATACCTTTATGGACAGTTAGCTCACAAAACAACTGCATAATCTGGGATCAC 3673
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3674 TCTTGGTAAATCAGGTGGGTGGTGCAGCCAGGAGATCCCCTTTCCTGGTCACAACAGGAGCACAAAGAAACCAT 3747
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3748 TATCTCCATGACTAGCTCCAGAAGCTGGGCCCAGGGAGTCGTGATGAGGAGTGGAGGTGTATTTGGCCTGTAGA 3821
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3822 ATCAACGGCCTTTGAGAACCATACAATGCACCTTATATGGCTTGGGTGATCAAATAACTTAAGGTCCAAATTCA 3895
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3896 AACACTTTGGAAAAAGGGAGCTTTAATATAATTATGCCAAGGTGATAGGCATAAACTAAGACTGTCCTGGACGT 3969
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3970 AGGGTCACCCCTGTCTATAGCCATTTAAGATTTTTGAACCTGATGACTAAACAAACAAAACCCTCTTTCCTTTT 4043
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4044 TAGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGTTCAGGTAGGAAA 4117
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4118 TGCTCTTGGTCACATCAGAACTCTAGATCTGGGGGAATAAACAAACCCGAATTATTACCACACTCTCAAAGTTC 4191
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4192 TCTTCAATCTGGACTATTTGTATTCCAAAGAAAAATTTAGTGCTTTAGCTATTCAGCAATATTGAGAAAAAACA 4265
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4266 TGAACACATTTATGACTTTGCCTTGACCATTGACTTTTCTAAAATGTGCTTCCTTTTCCTTTATTTCCCTTTTT 4339
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4340 TTATACAAAGAAAATAGCCCAAATTTCTCCTCTTAGGTCATTCCTTAACCTCTCAGAGAACCAGTTTCCCCATG 4413
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4414 AATTGGGAATAATGCTCTATTTACAGGGCTGTTTGGATTAAATAAGATGCTGTTTATAAAGTGTCTGTGCCAGG 4487
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4488 GCAAAGCATGTGGTAGGTGCTTGGTGACAGCATGATCCCTGTCACCACTCTGTCAAGTCCAGTGTTGCTGAGAT 4561
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4562 GTCACACCTGACACCCTCTAAGGCTACCCTGATTGCCAGGAGTGGCCCAGGGCCCTTCTGCAGTCTCCGGGTGC 4635
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4636 CTTTAGTTATAACCTCTTGTCTGGGTCAGACCATTAGCTTTCATGTCTGCTTCTAGCTACAACTGTAGCCTCCC 4709
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4710 TTCCTTTTGCCTTCAAATCTGCCACAGCTGCCCGGCAACAAAAAAAGATTCCTAAGCATCTCGAGGTCCTGTTT 4783
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4784 AAATGGGTTAGGGTCCAAGCAAGCCCTGAGACATCAAGTGGTTGGGTCTTTTATACCTTTTTCATCTCTACAGC 4857
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4858 CCTGTTCTCTTCCTAAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGCGGCACAGCAGAC 4931
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 4932 CCTGAAGAGAACTGCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGTTCTGATG 5005
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 5006 AACCTTAAACTTGAAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTGAGGTTATGATCT 5079
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 5080 CTTTGCTATTATCACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATAGAAAAAAATTAG 5153
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 5154 GAAGTAAACAGGGCTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCAAGTTTAATTTGT 5227
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 5228 TGATATATGTGTGTACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGAAAATACCAAGTT 5301
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 5302 TGTCATTGCACATACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAAGTCAATAAAAGC 5375
Query 1105 ------------- 1104
Sbjct 5376 ACAGTTTTGCAAA 5388
