Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08936
- Subject:
- XR_930897.3
- Aligned Length:
- 3123
- Identities:
- 1100
- Gaps:
- 2019
Alignment
Query 1 --------------------------------ATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCGTCTGCACCTGCGACCACCGTGAGCAGTCATGGCGTACTCCACAGTGCAGAGAGTCGCTCTGGCTTCTGGG 74
Query 43 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTTGTCCTGGCTCTGTCGCTGCTGCTGCCCAAGGCCTTCCTGTCCCGCGGGAAGCGGCAGGAGCCGCCGCCGAC 148
Query 117 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACACTCAGATGGCCAGACTCCTG 190
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 149 ACCTGAAGGAAAATTGGGCCGATTTCCACCTATGATGCATCATCACCAGGCACCCTCAGATGGCCAGACTCCTG 222
Query 191 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGGCTCGTTTCCAGAGGTCTCACCTTGCCGAGGCATTTGCAAAGGCCAAAGGATCAGGTGGAGGTGCTGGAGGA 296
Query 265 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCGATCTACGGTTTTGGGATTTTTTTATATATACTGTA 338
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 297 GGAGGTAGTGGAAGAGGTCTGATGGGGCAGATTATTCCAATCTACGGTTTTGGGATTTTTTTATATATACTGTA 370
Query 339 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CATTCTATTTAAGCTCTCAAAGGGGAAAACAACTGCAGAGGATGGGAAATGCTATACTGCCATGCCTGGAAACA 444
Query 413 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCCACAGGAAAATTACCAGTTTTGAGCTTGCTCAACTGCAAGAAAAACTGAAGGAGACAGAAGCAGCCATGGAA 518
Query 487 AAATTATTCAACAGAGTGGGACCTAATGGTGAG----------------------------------------- 519
||||||.||||||||||||||||||||||||||
Sbjct 519 AAATTAATCAACAGAGTGGGACCTAATGGTGAGAGTACCCAGACAGACCATAGTGATGTTTACGTCCATTGCCT 592
Query 520 ----------------------------------------------AGAGCACAGACTGTGACTTCTGACCAAG 547
||||||||||||||||||||||||||||
Sbjct 593 AGGAGTATTTACCACTAAATGGTTGGATTGTCTGATATTTCTAAGCAGAGCACAGACTGTGACTTCTGACCAAG 666
Query 548 AGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCT 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGAAACGGTTGCTACATCAGCTCCGAGAAATCACCAGGGTCATGAAAGAAGGAAAATTCATTGACAGATTTTCT 740
Query 622 CCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTA 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAGAGAAAGAAGCTGAGGAGGCCCCTTACATGGAGGACTGGGAAGGTTACCCTGAAGAGACTTACCCAATTTA 814
Query 696 TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTG 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGACCTTTCAGACTGTATCAAGCGTAGGCAAGAAACAATCTTGGTGGATTACCCTGACCCAAAAGAACTTTCTG 888
Query 770 CTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCC 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGAAGAAATAGCTGAAAGAATGGGAATGATAGAAGAGGAAGAATCAGATCATTTGGGTTGGGAAAGTCTGCCC 962
Query 844 ACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTT 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACTGACCCCAGAGCCCAGGAAGATAATTCTGTTACCTCGTGTGATCCAAAGCCAGAAACATGTTCCTGCTGTTT 1036
Query 918 TCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGG 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCATGAAGACGAGGATCCTGCTGTCTTGGCAGAGAATGCTGGATTCAGTGCAGATAGCTACCCTGAGCAAGAGG 1110
Query 992 AAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACAGATAAAGCATATACA 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1111 AAACCACCAAAGAAGAGTGGTCCCAAGACTTTAAAGATGAAGGGTTGGGCATCAGCACCGATAAAGCATATACA 1184
Query 1066 GGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAG----------------------------------- 1104
|||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGCAGCATGCTGAGGAAGCGTAACCCCCAGGGTTTAGAGTGAAAACAGCCAGTCTGAAGTATCCATTACTCAAG 1258
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1259 TCCCAAGATGGGACCACTCAGGGGCAAAGGTCTGACTCTTCCTGGTAGGTGTAACAGATAGTTCACCTGTGAAC 1332
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1333 GAACATCAGCTTACAGATGATGAGGACTTAAGGTTGCAAGAATGAAGATTTCAGACTCCAAGATCCCTTATTCT 1406
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1407 TTGGGCCTTGAGCAGAATATCCTGTATGCGCTATTTCCCACCAGAGGCAGAGGCCACAGGAGATAGGCCATGGT 1480
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1481 TCAGGCCAGGCCCACAGGGGATACTGAGGAACCACCAGCCCCTTCAGGCGGCACAGCAGACCCTGAAGAGAACT 1554
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1555 GCTCTAACTTAAGTACCTTCTGACTTCACCATTTTTCCAGCCTCTGGGTGTGGTTCTGATGAACCTTAAACTTG 1628
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1629 AAAGGCACAGGCCAGAGGAAGGACAGTGTTGACCCACATGTCATTGGTGAGGTTATGATCTCTTTGCTATTATC 1702
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1703 ACCTACTTACCCACCTGAGGCTCCTAGGAAACAATGAATGAAAGGTATAGAAAAAAATTAGGAAGTAAACAGGG 1776
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1777 CTTTTTTCCCCTTTATGAAAAAAGTACACAGAAGTGTTGAAACGATTCAAGTTTAATTTGTTGATATATGTGTG 1850
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1851 TACTTAGACAAACACTAAATTCTACAACATACATAATGTCAACATGGGAAAATACCAAGTTTGTCATTGCACAT 1924
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1925 ACCAATAAATAAATACATTTGCTCCAGAATACCAAAGTTTATTCAAAAAGTCAATAAAAGCACAGTTTTGCAAA 1998
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 1999 TTTGTCTAAAACGCCAGATAATCTTGAACAAAAATAAAATGTCTGACCACTCCAAAATAGGAAAAGACAATCTT 2072
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2073 GTGCAAATAGACATACACAGTCTAGGCATTGTGAAAACTGGCTGTGTTCCCAGCAAGAGATACTGCACCCTCCT 2146
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2147 GACCGAGCAGTCAGGCTTCCCTTTCCTAGCCATCCTAAGTTGCGTTCTAGGAAACTCTGGATCTCAGCCTCATC 2220
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2221 TCCAGCTTTGCCTGGACCTTGCTAGGGGGAGGGAGGGACAGGAGCACAGAGGAGGAGAGGAGAGGGATGTGATG 2294
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2295 TCTTTCTTAGGAAAGAAAAAAAGGCACAGTGATGAGCTATAAAGGTAGTGATGAGAGCTATAAAGGTAGTGATG 2368
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2369 AAAGCAAGGAATAATTTTCATTCACCCCAAATCCTACGGCAAGCTTTGACAATGTAACATCTTTATCTTGTGGT 2442
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2443 TAGGAAAATGGACCTAGAGAGATTATGTGGTTTGCTCAAAATCACATAGCTACTAAGTGCAGTAGTGCTTTCTA 2516
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2517 TAAGACCAACTTGCCTTTCCACTTGGTTGGAAAATTTAAAAACCAAACCTGTCGTAATCTATCTGTTCTGCCCC 2590
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2591 TCCCGCCTGTATCATGAGATGACTGAAAATTCCAGGTGGCCATAAACTCAAACAAGAGCCTAGCCCTTGGCTTA 2664
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2665 TTACCGGTGGCTACTACAAACCTACAGACCAGAGCCCAGGGTAGTATAGAGTCCCAACTCTGGGCCCTGACTGC 2738
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2739 AGGTCATTCAGGTCCCAGTCACAGTGAAAGCAGACTCATTCAGCTATCTGGAGAAGTGTAATCTGAGGGCCACT 2812
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2813 TGGCATCCTGAGTTAACACAGGGATGCCGCAGCTGGGGTAAGGAATTAGAGAAGGGAAGGCCAGTGTTACTGCA 2886
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2887 GTAAGAGAAAACCAGGAAGTCCATCTAGGAGATGAAATTTGTGCTTGCATAACAGAGCCATGGAAATGGCTATC 2960
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 2961 CCAGCATCTCCCCTCACTGCAGACTCCATTGTAAGCAAAGCATGGACCTTTTTCTTTGAAACCAACCCTGTCAC 3034
Query 1105 -------------------------------------------------------------------------- 1104
Sbjct 3035 TTGTTAAATTTAGAATTACCTCTAAATGCTAAGTTTATTTAAGAGGTAAATGTCCTGCTATTTTCAGAATGGAG 3108
Query 1105 --------------- 1104
Sbjct 3109 AAAAAAAAAAAAAAA 3123
