Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08940
- Subject:
- XR_002958068.1
- Aligned Length:
- 2291
- Identities:
- 593
- Gaps:
- 1697
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGAACCGAGCCCAGGAGCCGGGGACGGTGCGCCAGTGCCCCCTCCGCGAGCCCCAACCAGTAGACGGTTCCCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTCCCGCGCCCCAATTTCGATTTTCAAACGCAACTCCTACAGGATTCTGAGACCCCGTCCCATCTCCCATATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATTTCCAGCTGCAAATTACTGCAGAATCTGAACCCAGGAAAGAAACCCATTTGCCGACCCCCTCTTCCCTCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCAGACAGGTGGAGAGCGGGTGAGGGTCTCGCTCGGCTTTCCCCCTGCACCTTTCCCACCCTCCCGCCCGTCCC 296
Query 1 ------------------------ATGGCCCAGAAGCCGAAGGTGGACCCCCACGTCGGGCGGCTGGGATACCT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGGGGTCCTCCGTCACCGCGGCCATGGCCCAGAAGCCGAAGGTGGACCCCCACGTCGGGCGGCTGGGATACCT 370
Query 51 GCAGGCGCTGGTCACGGAATTCCAGGAGACCCAAAGCCAAGACGCCAAGGAGCAAGTCCTCGCCAACCTCGCCA 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCAGGCGCTGGTCACGGAATTCCAGGAGACCCAAAGCCAAGACGCCAAGGAGCAAGTCCTCGCCAACCTCGCCA 444
Query 125 ACTTCGCTTATGACCCCAGCAACTACGAGTATCTGCGGCAGCTGCAGGTCCTGGATTTATTTCTCGATTCGCTG 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACTTCGCTTATGACCCCAGCAACTACGAGTATCTGCGGCAGCTGCAGGTCCTGGATTTATTTCTCGATTCGCTG 518
Query 199 TCGGAGGAGAATGAGACCCTGGTGGAGTTTGCTATT-------------------------------------- 234
||||||||||||||||||||||||||||||||||||
Sbjct 519 TCGGAGGAGAATGAGACCCTGGTGGAGTTTGCTATTGCTGCTGCAGTCTGAACGGTGACGGTGGCCCCTGCAGA 592
Query 235 -------------------------------------------------------------------------- 234
Sbjct 593 AGCATGTGGCTAAATCTCCACCAGGGGGCGATAGAGCTCCTCCAAATCAAGCTGCTGCCCCTGGAGAAAAATTG 666
Query 235 -----------------------------------------------------------------------GGA 237
|||
Sbjct 667 GCGGAAGTCACAGAGCAGTCCCCACCAAAAGTGTTTACCAAGTGGAGTCTTTCCTGCTGGCGTTTCCTCAGGGA 740
Query 238 GGCCTGTGCAACCTGTGCCCAGACAGGGCCAACAAGGAGCACATCCTGCACGCAGGAGGTGTCCCACTCATCAT 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGCCTGTGCAACCTGTGCCCAGACAGGGCCAACAAGGAGCACATCCTGCACGCAGGAGGTGTCCCACTCATCAT 814
Query 312 CAACTGCCTATCCAGCCCCAATGAGGAGACGGTGCTGTCTGCCATCACCACGCTCATGCACCTGAGCCCGCCGG 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAACTGCCTATCCAGCCCCAATGAGGAGACGGTGCTGTCTGCCATCACCACGCTCATGCACCTGAGCCCGCCGG 888
Query 386 GCCGCAGCTTTCTCCCAGAGCTGACCGCCACGCCCGTGGTGCAGTGCATGCTTCGCTTCTCCCTCTCGGCCAGC 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCCGCAGCTTTCTCCCAGAGCTGACCGCCACGCCCGTGGTGCAGTGCATGCTTCGCTTCTCCCTCTCGGCCAGC 962
Query 460 GCCAGGCTCCGGAACCTGGCACAGATCTTCCTGGAGGACTTCTGCTCCCCCCGCCAGGTGGCCGAGGCCCGCAG 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCCAGGCTCCGGAACCTGGCACAGATCTTCCTGGAGGACTTCTGCTCCCCCCGCCAGGTGGCCGAGGCCCGCAG 1036
Query 534 CCGGCAGGCGCACTCTGCCCTGGGTATCCCACTGCCGAGGAGCGTGGCCCCACGGCAGCTC------------- 594
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1037 CCGGCAGGCGCACTCTGCCCTGGGTATCCCACTGCCGAGGAGCGTGGCCCCACGGCAGCGCTGATCCATGGAGA 1110
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1111 CTGCGAGACCGTGGCACCCCTACTGCTGGAGACCACAGTCCTGATGTGGACGCAGGGAACGGGGAGCACATACT 1184
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1185 GCCCCATTGGTGCCTTTTCAGCCATCTGAAAGGCGGGTTCTTTCAGCAGGACAGGCATTTACACTGATGAAACG 1258
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1259 CCACTGGGAGTGAGGAAGCCAGACTCCAGAGACACGGAGAAGATCAAACTGGAGCTGCGTTCATAGGCTGGCAC 1332
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1333 TCTCAATCCTACATCAGGTGCCACCACCACCAGACTCAGGCCCTGGTGTAAGAAGCGGCCAAGTGCCTGGACCC 1406
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1407 AGAGGCTTTGCAGGACAGTGTTCTCAGGAGCTGGGCCTGAGGCTTAGGAGAGCTGCCTTCGCTGCAGGAAATCA 1480
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1481 GGGATTATCCCTTAACAGAAGTGTCTGGAGTAGTTTTCAGGTATAGGAATGAGATGCCTCGTGGTGAAAGGATC 1554
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1555 TCACCCTGGGAAGATGTGGTGCCCCCTCCAGGGCTCTGGAGGATGGATGCCTCCCCCAGGGGCTCTCCAAGCTG 1628
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1629 GGCATTTGGGCCTGGTGGATGCCAACCTGGATAACCTGTGGCCCAGCATTGACTGTCCACCCAGCCTTGCTGTT 1702
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1703 AGGCACCATGACTCCAAGATGAAGATGTGGTCCCTGCCCTTGAGTGACAGCCCAGGGACTTAATGTGGCCATCG 1776
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1777 GGCATCAAGCACAAGGCCATGCAGGTGATGATACGTCGGAATAGAGGCACCAGCCCTGGTAACTGCATCTTCTC 1850
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1851 CCCTTGCCACCCCATGGCCCCGGCTGAAAGCTTCGGCCCTCCTCTGCTGTCACTCAATGATGGGGAGCCCTACC 1924
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1925 CCAGAAGTGTATCCCACGAGGGCATCAGGGACGCAGTGAGTGTTGCTCAAGGGAGTCAGGAAGAGACGGCAACG 1998
Query 595 -------------------------------------------------------------------------- 594
Sbjct 1999 TAAAGGATGTGGCTCCATGTCCATGGTGCCCCCTGGTCAACATAAGGAGCGTGGGATCCGATGGAAAGGTGGAG 2072
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2073 CTCAGGGAAAATGGGGGTCCTTGCCTCTCGTGTACCCCCTCAAGGCTGACCCCTTAGATGGCCCAGGAATGGCA 2146
Query 595 -------------------------------------------------------------------------- 594
Sbjct 2147 GGTGCTACAAAAATGGTACCCACGTGGGCATGGAAATGGGGCAGATTAGGGGACCACTGGACTCAGAGGGGAGG 2220
Query 595 ----------------------------------------------------------------------- 594
Sbjct 2221 GAAGGGCTCATCAGCACCCGCTCAGGGAGCCTGTCCCTTTATGTTCCCAAATAAAGGGTCCTAGAAGACTA 2291
