Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08959
Subject:
XR_001778433.1
Aligned Length:
2079
Identities:
1180
Gaps:
711

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGCCCGCCTGCCGGCCCCGCCCCCCAGCCGCCATTGACAGTGTAGGCTCGCACTTCCTTGCAGAGGGATGGCTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCTTCGGGCGGGCCCGGTAGCCCCGCAGTGTGCGCTGCTCTGGTAGCGGCTCGCAAGCGGGCGCGATCCGGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCGCGGGTGCACAGGTGCGGCCCACGCCTCCCTCGGCGCCTCAGCACCTTCGGGGCGGGACGCGGGACGGTCTG  222

Query    1  ---------ATGATGGAGGGAAGCAGGCAGACGCGAGTGTCTCGGCCATACAAGATCAGCGAATCATCAAAGGT  65
                     |..|||||||.|||||.|||||.|||.||.||.|||||||||||.|||||.||.||.||||||||
Sbjct  223  AGATTGGTCACAATGGAGGCAAGCAAGCAGATGCGGGTATCCCGGCCATACAAAATCAGTGAGTCTTCAAAGGT  296

Query   66  ATACCGCTGGGCCGACCACTCAAGCACGGTGCTGCAGCGGCTGAACGAGCAGCGTCTCCGCGGGCTCTTCTGCG  139
            .||||.||||.|.||||||||.|...||||||||||||||||||||||||||||.||.|.|||.||||||||||
Sbjct  297  GTACCACTGGCCTGACCACTCTACTGCGGTGCTGCAGCGGCTGAACGAGCAGCGGCTGCACGGCCTCTTCTGCG  370

Query  140  ACGTCGTCCTGGTGGCCGATGAGCAGCGTGTGCCAGCCCATCGCAACCTGCTGGCCGTGTGCAGCGACTACTTC  213
            ||||.||.|||||||.|||.|||||||..|||||||||||.||||||||.|||||.||||||||||||||||||
Sbjct  371  ACGTGGTGCTGGTGGTCGAAGAGCAGCAAGTGCCAGCCCACCGCAACCTTCTGGCTGTGTGCAGCGACTACTTC  444

Query  214  AACTCCATGTTCACCATCGGCATGCGGGAAGCTTTCCAGAAGGAGGTGGAGCTGATCGGCGCCTCCTACATTGG  287
            ||||||||||||||..|.||||||||.|||||||||||||||||||||||||||.|.|||.||||||||.|.||
Sbjct  445  AACTCCATGTTCACACTGGGCATGCGCGAAGCTTTCCAGAAGGAGGTGGAGCTGGTGGGCACCTCCTACGTGGG  518

Query  288  GCTCAAGGCCGTGGTGGACTTCCTGTACGGCGGGGAGCTGGTGCTGGATGGCGGCAACATTGACTACGTCCTGG  361
            |||||||||||||||.||.|||||.|||.||.|.|||||||.||||||.|||.||||||||||||||.||||||
Sbjct  519  GCTCAAGGCCGTGGTAGATTTCCTCTACAGCAGCGAGCTGGAGCTGGACGGCAGCAACATTGACTACATCCTGG  592

Query  362  AGACGGCTCACCTGCTGCAGATCTGGACGGTGGTAGACTTCTGCTGTGAGTACCTGGAGCAGGAGGTGAGCGAG  435
            |||||||.||.|||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||||||
Sbjct  593  AGACGGCGCATCTGCTGCAGATCTGGACCGTGGTGGATTTCTGCTGTGAGTACCTGGAGCAGGAGGTGAGCGAG  666

Query  436  GACAACTACCTGTACCTGCAGGAGCTGGCCTCCATCTACAGCCTCAAGCGGCTTGATGCCTTCATCGATGGCTT  509
            ||||||||.||.|||||.|||||||||||||||||||||||.||||||.||||.|||||||||||||||.||||
Sbjct  667  GACAACTATCTCTACCTACAGGAGCTGGCCTCCATCTACAGTCTCAAGAGGCTCGATGCCTTCATCGATAGCTT  740

Query  510  CATCCTGAACCACTTCGGCACGCTGTCCTTTACGCCCGACTTCCTGCAGAACGTCTCCATGCAGAAGCTGTGTG  583
            |.|.||||.|||||||.|||||||||||||.|||||.||||||||||||..|.|||||.|||||||||||||||
Sbjct  741  CGTACTGAGCCACTTCAGCACGCTGTCCTTCACGCCTGACTTCCTGCAGTCCATCTCCGTGCAGAAGCTGTGTG  814

Query  584  TCTACCTGAGCAGCAGCGAGGTGCAGCGGGAGTGTGAGCACGACCTCTTGCAGGCCGCCCTGCAGTGGCTGACG  657
            |||||||||||||..||.||||.||||...|.||.||..|||||||..||||||..||.|||||||||||.|||
Sbjct  815  TCTACCTGAGCAGTGGCCAGGTACAGCACAAATGGGAATACGACCTGCTGCAGGTGGCTCTGCAGTGGCTCACG  888

Query  658  CAGCAGCCCGAGCGCGAGGCCCACGCCCGCCAGGTGCTGGAGAACATCCACTTCCCGCTCATCCCCAAGAACGA  731
            ||||||||.||||||||||..|||.||||||..||.|||||||||||||.||||||.|||.|||||.||.||..
Sbjct  889  CAGCAGCCGGAGCGCGAGGTGCACACCCGCCGCGTTCTGGAGAACATCCGCTTCCCCCTCTTCCCCGAGGACAT  962

Query  732  CCTGCTGCACCGCGTCAAGCCGGCCGTGTGCTCGCTGCTGCCCAAGGAGGCCAACTGCGAGGGCTTCATCGAGG  805
            ||||||.||.||.||.||||.||||.|||||||.||||||||||..|||||||||.||||||||||..|.||||
Sbjct  963  CCTGCTACAGCGGGTGAAGCTGGCCATGTGCTCTCTGCTGCCCAGCGAGGCCAACGGCGAGGGCTTTGTGGAGG  1036

Query  806  AGGCCGTGCGCTACCACAACAACCTGGCGGCCCAGCCCGTCATGCAGACCAAGCGCACGGCGCTGCGCACCAAC  879
            |||||.|||.|||||||||||.|||||.|||||||||.|||.|||||||.|||||.|||..|||||||.|   |
Sbjct 1037  AGGCCATGCACTACCACAACAGCCTGGTGGCCCAGCCTGTCCTGCAGACGAAGCGAACGCTGCTGCGCTC---C  1107

Query  880  CAGGAGCGCCTGCTGTTTGTGGGCGGCGAGGTCTCCGAGCGGTGTCTGGAGCTCAGTGACGACACCTGCTACCT  953
            .|||||.||.||||.||.|||||.|||||||||||.|||||||||||||||||.||.||.||||||||||||||
Sbjct 1108  GAGGAGTGCTTGCTCTTCGTGGGGGGCGAGGTCTCTGAGCGGTGTCTGGAGCTGAGCGATGACACCTGCTACCT  1181

Query  954  GGACGCCAAGAGCGAGCAGTGGGTCAAAGAGACGCCGCTGCCCGCCCGGCGGAGCCACCACTGTGTCGCGGTGC  1027
            .|||.||||||..|||||||||||.||.|||||..|.|||||.|||||.||||||||||||||.|||||.||||
Sbjct 1182  AGACACCAAGAATGAGCAGTGGGTGAAGGAGACATCCCTGCCGGCCCGCCGGAGCCACCACTGCGTCGCTGTGC  1255

Query 1028  TGGGGGGCTTCATCTTCATCGCCGGCGGCAGCTTCTCACGGGACAACGGAGGGGATGCGGCCTCCAATCTTCTT  1101
            |||||||||||||||||||.|||||.|||||||||||..|.||||||||||||.||||.||||||||.||||||
Sbjct 1256  TGGGGGGCTTCATCTTCATTGCCGGGGGCAGCTTCTCGAGAGACAACGGAGGGAATGCCGCCTCCAACCTTCTT  1329

Query 1102  TATAGGTATGACCCCCGCTGTAAACAGTGGATCAAGGTGGCCTCCATGAACCAGCGCCGTGTGGATTTCTACCT  1175
            |||                               |||||||.||||||||||||||||||||||||||||||||
Sbjct 1330  TAT-------------------------------AGGTGGCGTCCATGAACCAGCGCCGTGTGGATTTCTACCT  1372

Query 1176  TGCCTCCATCGAAGACATGCTGGTGGCCATCGGCGGCCGGAATGAGAACGGAGCGCTCTCTTCAGTAGAGACGT  1249
            .||.|||||.|||||||||||||||||..||||.||||||||.|||||.||||||||.|||||.||||||||.|
Sbjct 1373  AGCTTCCATTGAAGACATGCTGGTGGCTGTCGGTGGCCGGAACGAGAATGGAGCGCTGTCTTCTGTAGAGACCT  1446

Query 1250  ACAGTCCCAAGACTGACTCCCGGTCCTATGTGGCCGGCTTGCCAAGGTTCACGTACGGCCACGCGGGCACCATC  1323
            ||||.||||||||..|||||.||.||||.|||||||||||||||||||||||.||.||||||||||||||||||
Sbjct 1447  ACAGCCCCAAGACCAACTCCTGGACCTACGTGGCCGGCTTGCCAAGGTTCACCTATGGCCACGCGGGCACCATC  1520

Query 1324  TACAAAGACTTCGTGTACATCTCGGGGGGCCACGACTACCAAATTGGCCCCTACCGCAAGAACCTGCTATGCTA  1397
            |||||||||||.||.||||||||.|||||||||||||||||.||||||||.|||||||||||||||||.||.||
Sbjct 1521  TACAAAGACTTTGTCTACATCTCAGGGGGCCACGACTACCAGATTGGCCCGTACCGCAAGAACCTGCTGTGTTA  1594

Query 1398  CGACCACCGGACAGACGTGTGGGAGGAGCGGCGGCCCATGACCACGGCGCGCGGCTGGCACAGCATGTGCAGCC  1471
            .||||                                                                     
Sbjct 1595  TGACC---------------------------------------------------------------------  1599

Query 1472  TGGGTGACAGCATCTACTCCATCGGGGGCAGCGATGACAACATCGAGTCCATGGAGCGCTTCGACGTGCTGGGC  1545
                                                                                      
Sbjct 1600  --------------------------------------------------------------------------  1599

Query 1546  GTGGAGGCCTACAGCCCGCAGTGCAACCAGTGGACCCGCGTGGCGCCGCTGCTGCACGCCAACAGCGAGTCGGG  1619
                                                                                      
Sbjct 1600  --------------------------------------------------------------------------  1599

Query 1620  CGTGGCAGTGTGGGAGGGCCGCATCTACATCCTGGGCGGCTACAGCTGGGAGAACACTGCCTTCTCCAAGACCG  1693
                                                                                      
Sbjct 1600  --------------------------------------------------------------------------  1599

Query 1694  TGCAGGTGTACGACCGCGAGGCCGACAAGTGGAGCAGGGGCGTCGACCTGCCCAAGGCCATCGCTGGCGGGTCC  1767
                                                                                      
Sbjct 1600  --------------------------------------------------------------------------  1599

Query 1768  GCCTGTGTCTGCGCCCTGGAGCCACGGCCAGAGGACAAGAAGAAGAAAGGCAAAGGCAAGAGGCACCAGGACCG  1841
                                                                                      
Sbjct 1600  --------------------------------------------------------------------------  1599

Query 1842  GGGCCAG  1848
                   
Sbjct 1600  -------  1599

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