Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08967
- Subject:
- XM_011516579.1
- Aligned Length:
- 2824
- Identities:
- 1666
- Gaps:
- 1154
Alignment
Query 1 ATGTGGACAGAGGAAGCCGGGGCGACCGCCGAGGCCCAGGAATCCGGCATCAGGAACAAGTCTAGCAGTTCCAG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTGGACAGAGGAAGCCGGGGCGACCGCCGAGGCCCAGGAATCCGGCATCAGGAACAAGTCTAGCAGTTCCAG 74
Query 75 TCAAATCCCGGTGGTTGGGGTGGTGACGGAGGACGATGAGGCGCAGGATGTTTTCAAGCCTATGGACCTTAATC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TCAAATCCCGGTGGTTGGGGTGGTGACGGAGGACGATGAGGCGCAGGATGTTTTCAAGCCTATGGACCTTAATC 148
Query 149 GTGTCATCAAACTCCTCGAAGAGACTGATAAAGATGGCTTGGAAGAAAAACAACTTAAATTTGTCAAGAAACTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTGTCATCAAACTCCTCGAAGAGACTGATAAAGATGGCTTGGAAGAAAAACAACTTAAATTTGTCAAGAAACTG 222
Query 223 GTACAGTGTTATCAGAATGGACTTCCATTAAGGGATTTAGCACAGATATTTAAAATTCTGAATCTGTGTTCAGG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTACAGTGTTATCAGAATGGACTTCCATTAAGGGATTTAGCACAGATATTTAAAATTCTGAATCTGTGTTCAGG 296
Query 297 AAAAATAAAAAACCAGCCTCGTTTTATAGAATCTGCATATGATATCATAAAACTGTGTGGCTTGCCATTTTTGA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAAAATAAAAAACCAGCCTCGTTTTATAGAATCTGCATATGATATCATAAAACTGTGTGGCTTGCCATTTTTGA 370
Query 371 AAAAGAAAGTGTCGGATGAAATAACTTATGCTGAAGATACTGCTAATTCAATTGCACTTCTGGGTGACTTAATG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAAAGAAAGTGTCGGATGAAATAACTTATGCTGAAGATACTGCTAATTCAATTGCACTTCTGGGTGACTTAATG 444
Query 445 AAAATACCAAGTTCTGAATTGAGGATACAAATTTGTAAGTGTATTGTTGATTTTTATCATGCAGAACCACCAAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAAATACCAAGTTCTGAATTGAGGATACAAATTTGTAAGTGTATTGTTGATTTTTATCATGCAGAACCACCAAA 518
Query 519 GAAGCATATTCCAGGTTACCAGCAAGCGAGTTCATCATACAAGATTCAAATGGCTGAAGTTGGAGGATTAGCAA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAAGCATATTCCAGGTTACCAGCAAGCGAGTTCATCATACAAGATTCAAATGGCTGAAGTTGGAGGATTAGCAA 592
Query 593 AAACAATGGTCCAGTCAATGACCTTGCTTGAAAATCAACTTGTTGAGAAACTTTGGGTACTTAAAGTTCTGCAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAACAATGGTCCAGTCAATGACCTTGCTTGAAAATCAACTTGTTGAGAAACTTTGGGTACTTAAAGTTCTGCAG 666
Query 667 CATCTCTCAACTTCTGAAGTTAATTGTACTATAATGATGAAAGCACAAGCAGCCAGTGGAATCTGTACTCACCT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CATCTCTCAACTTCTGAAGTTAATTGTACTATAATGATGAAAGCACAAGCAGCCAGTGGAATCTGTACTCACCT 740
Query 741 CAATGACCCAGATCCCTCTGGACAGCTTTTATTTCGTTCATCAGAAATACTTTGGAACTTGCTGGAAAAATCTT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAATGACCCAGATCCCTCTGGACAGCTTTTATTTCGTTCATCAGAAATACTTTGGAACTTGCTGGAAAAATCTT 814
Query 815 CAAAAGAAGAAGTCATACAACAGCTTAGTAACTTGGAATGTTTGCTGGCTTTGAAGGAAGTATTTAAAAATCTG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAAAAGAAGAAGTCATACAACAGCTTAGTAACTTGGAATGTTTGCTGGCTTTGAAGGAAGTATTTAAAAATCTG 888
Query 889 TTTATGAGAGGTTTCAGTCATTATGACCGTCAGCTTAGAAATGACATATTAGTGATCACTACAATTATAGCTCA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTTATGAGAGGTTTCAGTCATTATGACCGTCAGCTTAGAAATGACATATTAGTGATCACTACAATTATAGCTCA 962
Query 963 AAATCCTGAAGCACCAATGATTGAATGTGGCTTTACCAAGGATTTGATACTGTTTGCCACCTTTAATGAAGTTA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAATCCTGAAGCACCAATGATTGAATGTGGCTTTACCAAGGATTTGATACTGTTTGCCACCTTTAATGAAGTTA 1036
Query 1037 AAAGTCAAAATCTTTTGGTAAAAGGACTTAAGCTTTCTAATTCCTATGAAGATTTTGAGTTGAAGAAATTACTA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAAGTCAAAATCTTTTGGTAAAAGGACTTAAGCTTTCTAATTCCTATGAAGATTTTGAGTTGAAGAAATTACTA 1110
Query 1111 TTCAATGTAATTGTGATCTTATGTAAAGATTTACCTACTGTACAGCTATTAATTGATGGCAAAGTTATTTTGGC 1184
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTCAACGTAATTGTGATCTTATGTAAAGATTTACCTACTGTACAGCTATTAATTGATGGCAAAGTTATTTTGGC 1184
Query 1185 TTTGTTTACCTATGTTAAGAAGCCTGAGAAGCAAAAAATAATTGACTGGTCTGCAGCACAGCATGAAGAATTAC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TTTGTTTACCTATGTTAAGAAGCCTGAGAAGCAAAAAATAATTGACTGGTCTGCAGCACAGCATGAAGAATTAC 1258
Query 1259 AACTGCATGCAATTGCCACTTTGTCATCAGTGGCTCCTTTATTAATAGAAGAATACATGTCATGCCAGGGAAAT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AACTGCATGCAATTGCCACTTTGTCATCAGTGGCTCCTTTATTAATAGAAGAATACATGTCATGCCAGGGAAAT 1332
Query 1333 GCTCGAGTCCTTGCATTTCTAGAATGGTGTGAGAGTGAAGATCCGTTTTTCAGTCATGGTAACAGTTTTCATGG 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCTCGAGTCCTTGCATTTCTAGAATGGTGTGAGAGTGAAGATCCGTTTTTCAGTCATGGTAACAGTTTTCATGG 1406
Query 1407 TACAGGTGGCCGAGGCAACAAGTTTGCCCAGATGCGTTACAGTTTAAGACTCCTGAGAGCCATGGTCTACCTTG 1480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1407 TACAGGTGGCCGAGGCAACAAGTTTGCCCAGATGCGTTACAGTTTAAGACTCCTGAGAGCCGTGGTCTACCTTG 1480
Query 1481 AAGATGAGACTGTAAACAAAGATCTTTGTGAAAAGGGAACAATTCAGCAAATGATAGGAATCTTTAAAAATATA 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAGATGAGACTGTAAACAAAGATCTTTGTGAAAAGGGAACAATTCAGCAAATGATAGGAATCTTTAAAAATATA 1554
Query 1555 ATAAGCAAGCCTAATGAAAAGGAAGAAGCCATTGTTTTGGAAATCCAGTCTGATATATTACTTATCCTATCTGG 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATAAGCAAGCCTAATGAAAAGGAAGAAGCCATTGTTTTGGAAATCCAGTCTGATATATTACTTATCCTATCTGG 1628
Query 1629 CCTTTGTGAGAATCACATTCAAAGGAAGGAAATTTTCGGAACTGAAGGAGTAGATATCGTTCTTCAT-GTGATG 1701
|||||||||||||||||||||||||||| ||.||| ||||
Sbjct 1629 CCTTTGTGAGAATCACATTCAAAGGAAG---------------------------------CTCCATAGTGA-- 1667
Query 1702 AAAACAGACCCCAGGAAGTTACAGAGTGGCTTAGGCTATAATGTACTTCTTTTTAGTACATTGGACAGCATTTG 1775
||.|
Sbjct 1668 -------ACTC--------------------------------------------------------------- 1671
Query 1776 GTGCTGTATTTTGGGATGTTATCCCTCAGAGGATTATTTTCTTGAAAAGGAAGGCATTTTTCTCCTTTTGGATT 1849
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 1850 TGTTAGCATTGAACCAAAAAAAATTCTGTAATCTAATACTTGGAATAATGGTTGAATTTTGTGATAATCCCAAA 1923
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 1924 ACTGCAGCTCATGTCAATGCTTGGCAAGGGAAGAAGGATCAGACAGCTGCTAGTCTTTTAATTAAATTGTGGAG 1997
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 1998 AAAGGAGGAAAAAGAACTAGGAGTAAAACGTGATAAAAATGGGAAGATCATTGATACAAAAAAACCTCTATTTA 2071
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 2072 CTAGCTTTCAAGAAGAGCAAAAAATCATCCCACTGCCTGCTAACTGCCCATCTATTGCGGTTATGGATGTTTCT 2145
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 2146 GAGAATATTAGAGCAAAAATTTATGCTATATTGGGCAAACTAGATTTTGAAAATTTACCTGGCCTATCTGCTGA 2219
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 2220 AGATTTTGTCACCCTTTGTATCATACATAGATATCTTGATTTTAAAATTGGAGAAATATGGAATGAAATATATG 2293
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 2294 AAGAAATAAAATTAGAAAAATTAAGACCAGTCACTACAGATAAAAAAGCTTTGGAAGCTATTACAACAGCATCA 2367
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 2368 GAAAATATTGGAAAGATGGTTGCTTCTCTGCAAAGTGATATAATTGAAAGCCAAGCATGCCAAGACATGCAAAA 2441
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 2442 TGAACAAAAAGTATATGCAAAAATACAGGCCACGCACAAGCAAAGAGAGCTGGCTAATAAATCATGGGAAGATT 2515
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 2516 TCTTGGCTAGAACATCAAACGCTAAAACGTTAAAGAAAGCAAAAAGGCTTCAAGAAAAAGCTATAGAAGCCTCC 2589
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 2590 AGATACCATAAACGACCACAAAATGCAATATTTCACCAAACACATATTAAAGGCCTTAACACAACGGTGCCCTC 2663
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 2664 TGGTGGAGTAGTAACAGTGGAAAGCACTCCTGCCCGATTAGTAGGAGGACCTCTGGTTGATACGGATATTGCTC 2737
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 2738 TTAAAAAACTGCCCATTCGAGGAGGAGCCTTGCAGAGGGTGAAAGCAGTTAAAATTGTGGATGCACCAAAAAAG 2811
Sbjct 1672 -------------------------------------------------------------------------- 1671
Query 2812 AGTATTCCTACG 2823
Sbjct 1672 ------------ 1671
