Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08967
- Subject:
- XM_017012642.1
- Aligned Length:
- 2826
- Identities:
- 1396
- Gaps:
- 1425
Alignment
Query 1 ATGTGGACAGAGGAAGCCGGGGCGACCGCCGAGGCCCAGGAATCCGGCATCAGGAACAAGTCTAGCAGTTCCAG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTGGACAGAGGAAGCCGGGGCGACCGCCGAGGCCCAGGAATCCGGCATCAGGAACAAGTCTAGCAGTTCCAG 74
Query 75 TCAAATCCCGGTGGTTGGGGTGGTGACGGAGGACGATGAGGCGCAGGATGTTTTCAAGCCTATGGACCTTAATC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TCAAATCCCGGTGGTTGGGGTGGTGACGGAGGACGATGAGGCGCAGGATGTTTTCAAGCCTATGGACCTTAATC 148
Query 149 GTGTCATCAAACTCCTCGAAGAGACTGATAAAGATGGCTTGGAAGAAAAACAACTTAAATTTGTCAAGAAACTG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTGTCATCAAACTCCTCGAAGAGACTGATAAAGATGGCTTGGAAGAAAAACAACTTAAATTTGTCAAGAAACTG 222
Query 223 GTACAGTGTTATCAGAATGGACTTCCATTAAGGGATTTAGCACAGATATTTAAAATTCTGAATCTGTGTTCAGG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTACAGTGTTATCAGAATGGACTTCCATTAAGGGATTTAGCACAGATATTTAAAATTCTGAATCTGTGTTCAGG 296
Query 297 AAAAATAAAAAACCAGCCTCGTTTTATAGAATCTGCATATGATATCATAAAACTGTGTGGCTTGCCATTTTTGA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAAAATAAAAAACCAGCCTCGTTTTATAGAATCTGCATATGATATCATAAAACTGTGTGGCTTGCCATTTTTGA 370
Query 371 AAAAGAAAGTGTCGGATGAAATAACTTATGCTGAAGATACTGCTAATTCAATTGCACTTCTGGGTGACTTAATG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAAAGAAAGTGTCGGATGAAATAACTTATGCTGAAGATACTGCTAATTCAATTGCACTTCTGGGTGACTTAATG 444
Query 445 AAAATACCAAGTTCTGAATTGAGGATACAAATTTGTAAGTGTATTGTTGATTTTTATCATGCAGAACCACCAAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AAAATACCAAGTTCTGAATTGAGGATACAAATTTGTAAGTGTATTGTTGATTTTTATCATGCAGAACCACCAAA 518
Query 519 GAAGCATATTCCAGGTTACCAGCAAGCGAGTTCATCATACAAGATTCAAATGGCTGAAGTTGGAGGATTAGCAA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAAGCATATTCCAGGTTACCAGCAAGCGAGTTCATCATACAAGATTCAAATGGCTGAAGTTGGAGGATTAGCAA 592
Query 593 AAACAATGGTCCAGTCAATGACCTTGCTTGAAAATCAACTTGTTGAGAAACTTTGGGTACTTAAAGTTCTGCAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAACAATGGTCCAGTCAATGACCTTGCTTGAAAATCAACTTGTTGAGAAACTTTGGGTACTTAAAGTTCTGCAG 666
Query 667 CATCTCTCAACTTCTGAAGTTAATTGTACTATAATGATGAAAGCACAAGCAGCCAGTGGAATCTGTACTCACCT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CATCTCTCAACTTCTGAAGTTAATTGTACTATAATGATGAAAGCACAAGCAGCCAGTGGAATCTGTACTCACCT 740
Query 741 CAATGACCCAGATCCCTCTGGACAGCTTTTATTTCGTTCATCAGAAATACTTTGGAACTTGCTGGAAAAATCTT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAATGACCCAGATCCCTCTGGACAGCTTTTATTTCGTTCATCAGAAATACTTTGGAACTTGCTGGAAAAATCTT 814
Query 815 CAAAAGAAGAAGTCATACAACAGCTTAGTAACTTGGAATGTTTGCTGGCTTTGAAGGAAGTATTTAAAAATCTG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAAAAGAAGAAGTCATACAACAGCTTAGTAACTTGGAATGTTTGCTGGCTTTGAAGGAAGTATTTAAAAATCTG 888
Query 889 TTTATGAGAGGTTTCAGTCATTATGACCGTCAGCTTAGAAATGACATATTAGTGATCACTACAATTATAGCTCA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTTATGAGAGGTTTCAGTCATTATGACCGTCAGCTTAGAAATGACATATTAGTGATCACTACAATTATAGCTCA 962
Query 963 AAATCCTGAAGCACCAATGATTGAATGTGGCTTTACCAAGGATTTGATACTGTTTGCCACCTTTAATGAAGTTA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAATCCTGAAGCACCAATGATTGAATGTGGCTTTACCAAGGATTTGATACTGTTTGCCACCTTTAATGAAGTTA 1036
Query 1037 AAAGTCAAAATCTTTTGGTAAAAGGACTTAAGCTTTCTAATTCCTATGAAGATTTTGAGTTGAAGAAATTACTA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAAGTCAAAATCTTTTGGTAAAAGGACTTAAGCTTTCTAATTCCTATGAAGATTTTGAGTTGAAGAAATTACTA 1110
Query 1111 TTCAATGTAATTGTGATCTTATGTAAAGATTTACCTACTGTACAGCTATTAATTGATGGCAAAGTTATTTTGGC 1184
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTCAACGTAATTGTGATCTTATGTAAAGATTTACCTACTGTACAGCTATTAATTGATGGCAAAGTTATTTTGGC 1184
Query 1185 TTTGTTTACCTATGTTAAGAAGCCTGAGAAGCAAAAAATAATTGACTGGTCTGCAGCACAGCATGAAGAATTAC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TTTGTTTACCTATGTTAAGAAGCCTGAGAAGCAAAAAATAATTGACTGGTCTGCAGCACAGCATGAAGAATTAC 1258
Query 1259 AACTGCATGCAATTGCCACTTTGTCATCAGTGGCTCCTTTATTAATAGAAGAATACATGTCATGCCAGGGAAAT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AACTGCATGCAATTGCCACTTTGTCATCAGTGGCTCCTTTATTAATAGAAGAATACATGTCATGCCAGGGAAAT 1332
Query 1333 GCTCGAGTCCTTGCATTTCTAGAATGGTGTGAGAGTGAAGATCCGTTTTTCAGTCATGGTAACAGTTTTCATGG 1406
||||||||||||||||||||||||||||||||||||||||| ||||.|||
Sbjct 1333 GCTCGAGTCCTTGCATTTCTAGAATGGTGTGAGAGTGAAGA-------------------------TTTCGTGG 1381
Query 1407 TACAGGTGGCCGAGGCAA---CAAGTTTGCCCAGATGCGTTACAGTTTAAGACTCCTGAGAGCCATGGTCTACC 1477
||.|| ||| |.||||.|| |||
Sbjct 1382 -------------GGGAAAATCAA----GGCCAGGTG-----CAG----------------------------- 1404
Query 1478 TTGAAGATGAGACTGTAAACAAAGATCTTTGTGAAAAGGGAACAATTCAGCAAATGATAGGAATCTTTAAAAAT 1551
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 1552 ATAATAAGCAAGCCTAATGAAAAGGAAGAAGCCATTGTTTTGGAAATCCAGTCTGATATATTACTTATCCTATC 1625
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 1626 TGGCCTTTGTGAGAATCACATTCAAAGGAAGGAAATTTTCGGAACTGAAGGAGTAGATATCGTTCTTCATGTGA 1699
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 1700 TGAAAACAGACCCCAGGAAGTTACAGAGTGGCTTAGGCTATAATGTACTTCTTTTTAGTACATTGGACAGCATT 1773
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 1774 TGGTGCTGTATTTTGGGATGTTATCCCTCAGAGGATTATTTTCTTGAAAAGGAAGGCATTTTTCTCCTTTTGGA 1847
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 1848 TTTGTTAGCATTGAACCAAAAAAAATTCTGTAATCTAATACTTGGAATAATGGTTGAATTTTGTGATAATCCCA 1921
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 1922 AAACTGCAGCTCATGTCAATGCTTGGCAAGGGAAGAAGGATCAGACAGCTGCTAGTCTTTTAATTAAATTGTGG 1995
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 1996 AGAAAGGAGGAAAAAGAACTAGGAGTAAAACGTGATAAAAATGGGAAGATCATTGATACAAAAAAACCTCTATT 2069
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 2070 TACTAGCTTTCAAGAAGAGCAAAAAATCATCCCACTGCCTGCTAACTGCCCATCTATTGCGGTTATGGATGTTT 2143
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 2144 CTGAGAATATTAGAGCAAAAATTTATGCTATATTGGGCAAACTAGATTTTGAAAATTTACCTGGCCTATCTGCT 2217
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 2218 GAAGATTTTGTCACCCTTTGTATCATACATAGATATCTTGATTTTAAAATTGGAGAAATATGGAATGAAATATA 2291
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 2292 TGAAGAAATAAAATTAGAAAAATTAAGACCAGTCACTACAGATAAAAAAGCTTTGGAAGCTATTACAACAGCAT 2365
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 2366 CAGAAAATATTGGAAAGATGGTTGCTTCTCTGCAAAGTGATATAATTGAAAGCCAAGCATGCCAAGACATGCAA 2439
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 2440 AATGAACAAAAAGTATATGCAAAAATACAGGCCACGCACAAGCAAAGAGAGCTGGCTAATAAATCATGGGAAGA 2513
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 2514 TTTCTTGGCTAGAACATCAAACGCTAAAACGTTAAAGAAAGCAAAAAGGCTTCAAGAAAAAGCTATAGAAGCCT 2587
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 2588 CCAGATACCATAAACGACCACAAAATGCAATATTTCACCAAACACATATTAAAGGCCTTAACACAACGGTGCCC 2661
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 2662 TCTGGTGGAGTAGTAACAGTGGAAAGCACTCCTGCCCGATTAGTAGGAGGACCTCTGGTTGATACGGATATTGC 2735
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 2736 TCTTAAAAAACTGCCCATTCGAGGAGGAGCCTTGCAGAGGGTGAAAGCAGTTAAAATTGTGGATGCACCAAAAA 2809
Sbjct 1405 -------------------------------------------------------------------------- 1404
Query 2810 AGAGTATTCCTACG 2823
Sbjct 1405 -------------- 1404
