Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09043
- Subject:
- XR_001740298.2
- Aligned Length:
- 2352
- Identities:
- 1204
- Gaps:
- 1147
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCGGTGTCCGCCCCACGGCCGGCGTTGCCGGGGTAACGGCGAGCGCGTGGGGCCAAGAAAGAATACCTCCTCT 74
Query 1 -----ATGGCAGAAGCTGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTACGAGTCTCCATTG 69
|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAAAAATGGCAGAAGCAGTTTTCCATGCCCCAAAGAGGAAAAGAAGAGTGTATGAGACTTACGAGTCTCCATTG 148
Query 70 CCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAATGATTAACAACAA 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCAATCCCTTTTGGTCAGGACCATGGTCCTCTGAAAGAATTCAAGATATTCCGTGCTGAAATGATTAACAACAA 222
Query 144 TGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAGGTATTCTTTCAA 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGTGATTGTGAGGAATGCGGAGGACATTGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAGGTATTCTTTCAA 296
Query 218 GAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAGACAAACATGCCT 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAAGCCGTCCAAGCTTCACAATTTCAGATCCTAAACTGGTTGCTAAATGGAAAGATATGAAGACAAACATGCCT 370
Query 292 ATCATCACATCAAAGAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGA 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATCATCACATCAAAGAGGTATCAGCATAGTGTTGAGTGGGCAGCAGAGCTGATGCGTAGACAGGGGCAGGATGA 444
Query 366 GAGTACAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGG 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGTACAGTGCGCAGAATCCTCAAGGATTACACGAAACCGCTTGAGCATCCTCCTGTGAAAAGGAATGAAGAGG 518
Query 440 CTCAAGTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCT 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCAAGTGCATGACAAGCTTAACTCTGGAATGGTTTCCAACATGGAAGGCACAGCAGGGGGAGAGAGACCTTCT 592
Query 514 GTGGTAAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGG 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTGGTAAACGGGGACTCTGGAAAGTCAGGTGGTGTGGGTGATCCCCGTGAGCCATTAGGCTGCCTGCAGGAGGG 666
Query 588 CTCTGGCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCT 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTCTGGCTGCCACCCAACAACAGAGAGCTTTGAGAAAAGCGTGCGAGAGGATGCCTCACCTCTGCCCCATGTCT 740
Query 662 GTTGCTGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTC 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTTGCTGCAAACAAGATGCTCTCATCCTCCAGCGTGGCCTTCATCATGAAGACGGCAGCCAGCACATCGGCCTC 814
Query 736 CTGCATCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAG 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTGCATCCTGGGGACAGAGGGCCTGACCATGAGTACGTGCTGGTCGAGGAAGCGGAGTGTGCCATGAGCGAGAG 888
Query 810 GGAGGCTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCTTTG 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGAGGCTGCCCCAAATGAGGAATTGGTGCAAAGAAACAGGTTAATATGCAGAAGAAATCCATATAGGATCTTTG 962
Query 884 AGTATTTGCAACTCAGCCTAGAAGAGGCCTTTTTCTTGGTCTATGCTCTGGGATGTTTAAGTATTTACTATGAG 957
||||||||||||||||||||||||||
Sbjct 963 AGTATTTGCAACTCAGCCTAGAAGAG------------------------------------------------ 988
Query 958 AAGGAGCCTTTAACGATAGTGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACGTTCAGAACCACCTACAT 1031
Sbjct 989 -------------------------------------------------------------------------- 988
Query 1032 GGCCTACCATTACTTTCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTCAAGTACGGGACAGATTTACTGCTAT 1105
||||||
Sbjct 989 --------------------------------------------------------------------TGCTAT 994
Query 1106 ATCGGAAAGGCCCTCCATTTTACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGC 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 995 ATCGGAAAGGCCCTCCATTTTACCATGCAAGTTATTCTGTCATTATCGAGCTAGTTGATGACCATTTTGAAGGC 1068
Query 1180 TCTCTCCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCTAAGGAACT 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069 TCTCTCCGCAGGCCTCTCAGTTGGAAGTCCCTGGCTGCCTTGAGCAGAGTTTCCGTTAATGTCTCTAAGGAACT 1142
Query 1254 TATGCTGTGCTATTTGATTAAACCCTCTACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGA 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1143 TATGCTGTGCTATTTGATTAAACCCTCTACTATGACTGACAAGGAAATGGAGTCACCAGAATGTATGAAAAGGA 1216
Query 1328 TTAAAGTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAGACGATCTT------ 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1217 TTAAAGTTCAGGAGGTGATTCTGAGTCGATGGGTTTCTTCACGAGAGAGGAGTGACCAAGACGATCTTTAACAA 1290
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1291 TTCAACCTCAAATTTCTAATTTCACCAACAACTATTTATTGAGGGCTAGTTTCTCATCCCAGTTTCCCCAGCCT 1364
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1365 CCTGTGAAGGTGTCAGAGAAAGAAGATAGCCCTCTCTTCATGTGCTTTCTGAACTCTGCCTTTTCAGTGGGCAG 1438
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1439 AGGAAGTGCTTTGTAGCAGCAAACCCAACCCCTGAGCCTCCATGTGTCGGGTCAGGCAAAATGAAATTGACACA 1512
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1513 GGCTGGAATTTTACTGATTTCAGTCATTGCTGGGCTCGTTTGTGCAAATAGACTCAGAAGAGCTCCTTTAAAAG 1586
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1587 GAGTGACCATTTCCTGATTTAGATTCTGAGGGGGTTTTTGGTTTTTTTTACTGTTGTTCACTATCATGAGCTTA 1660
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1661 CCATGTGCTTTTTTCTTTTTTTTTTTCTTGTGATGTAGTCTCGCTCTGTCGTCCAGGCTGGAGTCCAATGCTGC 1734
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1735 GATCTTGGATCACTGCAACCTCTGCCTGCTGGGTTTAAGCGATTCTCATGCCTCAGCCTCCTGAGTAGCTGGGA 1808
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1809 TTACAGGCACGCACCACCACACACGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACTATGTTGGCCAG 1882
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1883 GCTGGTCTGGAACTCCTGACCTCAAGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGAGAGTACAGGCGTGAG 1956
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 1957 CCACTGCATCCAGCTCTTAGCATGTGCTTTTAAAGTAAAAACCACGAGGAGAAGGTACTCATTACTTCATAACT 2030
Query 1396 -------------------------------------------------------------------------- 1395
Sbjct 2031 TGTGTCTCACCCACCTTGCTGTCTTCACATCCCCACTTTCTGTATGCACATTGGAAGGTGAATTTGTTCAGCTC 2104
Query 1396 ---------------------------------------------------------- 1395
Sbjct 2105 ACATTAATTTATAGGAATAATTTTCATTGCTCTGTGAATAAAATGTGCTACCACTTTA 2162
