Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09080
- Subject:
- XR_426630.3
- Aligned Length:
- 4406
- Identities:
- 677
- Gaps:
- 3728
Alignment
Query 1 ------------------------------ATGGCGGCGGCGGCGGCGGCGGCTGGTGCTGCAGGGTCGGCAGC 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AAGAAGCCGAAGGGGAGTCGGCGGCACAAAATGGCGGCGGCGGCGGCGGCGGCTGGTGCTGCAGGGTCGGCAGC 74
Query 45 TCCCGCGGCAGCGGCCGGCGCCCCGGGATCTGGGGGCGCACCCTCAGGGTCGCAGGGGGTGCTGATCGGGGACA 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TCCCGCGGCAGCGGCCGGCGCCCCGGGATCTGGGGGCGCACCCTCAGGGTCGCAGGGGGTGCTGATCGGGGACA 148
Query 119 GGCTGTACTCCGGGGTGCTCATCACCTTGGAGAACTGCCTCCTGCCTGACGACAAGCTCCGTTTCACGCCGTCC 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGCTGTACTCCGGGGTGCTCATCACCTTGGAGAACTGCCTCCTGCCTGACGACAAGCTCCGTTTCACGCCGTCC 222
Query 193 ATGTCGAGCGGCCTCGACAGCGACACAGAGACCGACCTCCGCGTGGTGGGCTGCGAGCTCATCCAGGCGGCCGG 266
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATGTCGAGCGGCCTCGACACCGACACAGAGACCGACCTCCGCGTGGTGGGCTGCGAGCTCATCCAGGCGGCCGG 296
Query 267 TATCCTGCTCCGCCTGCCGCAGGTGGCCATGGCTACCGGGCAGGTGTTGTTCCAGCGGTTCTTTTATACCAAGT 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TATCCTGCTCCGCCTGCCGCAGGTGGCCATGGCTACCGGGCAGGTGTTGTTCCAGCGGTTCTTTTATACCAAGT 370
Query 341 CCTTCGTGAAGCACTCCATGGAGCATGTGTCAATGGCCTGTGTCCACCTGGCTTCCAAGATAGAAGAGGCCCCA 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCTTCGTGAAGCACTCCATGGAGCATGTGTCAATGGCCTGTGTCCACCTGGCTTCCAAGATAGAAGAGGCCCCA 444
Query 415 AGACGCATACGGGACGTCATCAATGTGTTTCACCGCCTTCGACAGCTGAGAGACAAAAAGAAGCCCGTGCCTCT 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGACGCATACGGGACGTCATCAATGTGTTTCACCGCCTTCGACAGCTGAGAGACAAAAAGAAGCCCGTGCCTCT 518
Query 489 ACTACTGGATCAAGATTATGTTAATTTAAAGAACCAAATTATAAAGGCGGAAAGACGAGTTCTCAAAGAGTTGG 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACTACTGGATCAAGATTATGTTAATTTAAAGAACCAAATTATAAAGGCGGAAAGACGAGTTCTCAAAGAGTTGG 592
Query 563 GTTTCTGCGTCCATGTGAAGCATCCTCATAAGATAATCGTTATGTACCTTCAGGTGTTAGAGTGTGAGCGTAAC 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTTTCTGCGTCCATGTGAAGCATCCTCATAAGATAATCGTTATGTACCTTCAGGTGTTAGAGTGTGAGCGTAAC 666
Query 637 CAACACCTGGTCCAGACCTCATGGGTAGCCTCTGAGGGTAAG-------------------------------- 678
||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAACACCTGGTCCAGACCTCATGGGTAGCCTCTGAGGGTAAGTGACTAAGACTTCTCCTCTGCTGTCCAAGCGC 740
Query 679 -------------------------------------------------------------------------- 678
Sbjct 741 TTTGGTGCAGGGACAGCGGCATCTTCAGCCAATCCAGTGCAGGCTCTCCACCGAAGGCTGGCTCTAGACTGGTG 814
Query 679 -------------------------------------------------------------------------- 678
Sbjct 815 GTACGCACATAGCATAGCCATGGCCGACTCCTGCTGTGGTTCTCTGACGATTGTGCTTCTTGTTAATCCTCTGT 888
Query 679 -------------------------------------------------------------------------- 678
Sbjct 889 CGTGCTTTGGTAATCGTATTGATTAGAGTTGGTAACTGTCTTGACTTGAATTTTGTCCCTTTAAAACTGCTGTA 962
Query 679 -------------------------------------------------------------------------- 678
Sbjct 963 CCTGTATGATAAAGATGCAGTACCTTTCTCTTAAAAAAAAATGCTATGGAAAGCTGTGAGAATTGAAGAGACAA 1036
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1037 ATTGGCTGTGTCAGTGTGGGGTTATGTCATGATTTCTAGAAGCCCTGAAGTTGCTCTTTTGAGCAGCTTTGCAT 1110
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1111 GACACGCTCTGGTAAAAGGTGTGCATCTTTAAATTATTTCATGGATACTTTGAAAAATATTGTATCACTTCAAA 1184
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1185 TACAGCAATAAGTTTATATGTTCTCAAGATTTCATTTGTTTTTAAGAATTTTAAGTTCGTGGATTAATATCACT 1258
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1259 ACTTGAATACTGACAGTTGTTGATTAGACACCGAAAGGTTACTGATTGTTGAATGTATCTGTGTTAGAGCTGTG 1332
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1333 CACTGGCACGCTTGCATCAGGGGCTGGGGCCACACGGCCGCCACACAGATTCCCCCGTGATGCCTGGAGCTGCT 1406
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1407 TCCAGAGCCGGGTGTCTCCAAGAGGCACCTGTAGGACTTCCCATTTAGAAATCTCTTGAGTGGGTTTGTATGTT 1480
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1481 ACCTTCTCCAAGGTTTATTTAGGACAGAGATATTGCTGGAAGGTCATGGGTCAGATTCCCTCACAACCCACCTC 1554
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1555 GTCTGCGGGTGCAGCCCCACTCCAAGGCTCCCCGTTATTGGGGTATGTGAGGAGCAGTAAATATAAAACCAGTT 1628
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1629 CAACTGTCCTCATGGAATCACCCTTTCTGTTTTTGCAGTATTCATAAAGCTAGTGTAAGGTCTGGTTTTAGTCT 1702
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1703 ATTAAATCTTAGAGATCTAAAGGAAATGCTCAAAATGTAGCCAGGTTTTAAATGCTTTAACTTTTAAAAAATGT 1776
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1777 AAATTTTTGTATGTTTATAGCTTCTAAATATGAAAGTTAAAGAATGTACTGTGATGAAATGTTCAGTATTATGT 1850
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1851 TGCTTCTCAGTATCATGTTGCTTCTCAGTATTGTGTTGCTTCTGATTCTATGAATGTTCATTTTAAGACCCCTT 1924
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1925 GTTGAAATGGGACAGTTGGCAGCGGCTCTGATGAGCCCGAGAAGAGGCCTGCCCTTGGGTGCGGAGTCTCCCTC 1998
Query 679 -------------------------------------------------------------------------- 678
Sbjct 1999 CGCACGATGCTCCCACGCGTCCAACTTGCACCCAAGGGGCTTTTCCCTCTTCCAAGTGGACTCCTTCAAGGAAG 2072
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2073 CTGCAGCTCGGTCAGCAGAGAAGGGGCCTGCCGCCAGCGCCCTGGAGGAAGAGGAAGAGGAACCCAAGAGGATG 2146
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2147 GCTTGTCTCCCAGCAGCCACACCGGCTTTGTGCTCAGCCAGTTCATTTGAGTTTGCATGTTTCTCTGCACTATG 2220
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2221 GATTTTGAGCATTTAGATTTCTTTAATCAAAAGCGTTTTAGTGACTCCAGTAGACATTTTCTTTCTGAGGCATC 2294
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2295 GTGCTTTGCATGAGAGCAGGCCAAGGTTGAGGGGAAAAGTAAAGTTAAAGTCGGTTCTCTTTCATAGCAACACG 2368
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2369 TATTGTCTGACATTCAGCCAGCTTTTTTTTTTTCTAATAATTTCTGTGCCTTTCTGTCCTGTATTTACTGTATT 2442
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2443 TAGAAAAAGCAGCTAGAATATTTCTCCATTAACTCTTGAGATTCACAGGACTGTCTAGCTCTGAGTCCTAGCAA 2516
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2517 TAGACTCCTTAGAGGAGTAGTACGTTTATCTAGATTTTCTCTAGATAATGCAGGCGGAAGACCTGGGTTCCCGG 2590
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2591 GTGGGGCATTGCAGTTCTTCCTGTGTTTGGCTTCCAGGAATTACATGAACGACAGCCTTCGCACCGACGTCTTC 2664
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2665 GTGCGGTTCCAGCCAGAGAGCATCGCCTGTGCCTGCATTTATCTTGCTGCCCGGACGCTGGAGATCCCTTTGCC 2738
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2739 CAATCGTCCCCATTGGTTTCTTTTGTTTGGAGCAACTGAAGAAGAAATTCAGGAAATCTGCTTAAAGATCTTGC 2812
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2813 AGCTTTATGCTCGGAAAAAGGTTGATCTCACACACCTGGAGGGTGAAGTGGAAAAAAGAAAGCACGCTATCGAA 2886
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2887 GAGGCAAAGGCCCAAGCCCGGGGCCTGTTGCCTGGGGGCACACAGGTGCTGGATGGTACCTCGGGGTTCTCTCC 2960
Query 679 -------------------------------------------------------------------------- 678
Sbjct 2961 TGCCCCCAAGCTGGCCTGGAGTGCAGTGGCGCTATCTGGGATCACTGCAAGCTCCGCCTACCAGATTCTGGTGA 3034
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3035 TTCTTGTGCCTCAGCCTCCCAAGTAGCTGGGATTGCAGGCGCCCACCACCACGCTCAGAGTCTCGCTGTGTTGC 3108
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3109 CAGTGGAATCCCCCAAAGAAGGTAAAGGGAGCAAGCCTTCCCCACTGTCTGTGAAGAACACCAAGAGGAGGCTG 3182
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3183 GAGGGCGCCAAGAAAGCCAAGGCGGACAGCCCCGTGAACGGCTTGCCAAAGGGGCGAGAGAGTCGGAGTCGGAG 3256
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3257 CCGGAGCCGTGAGCAGAGCTACTCGAGGTCCCCATCCCGATCAGCGTCTCCTAAGAGGAGGAAAAGTGACAGCG 3330
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3331 GCTCCACATCTGGTGGGTCCAAGTCGCAGAGCCGCTCCCGGAGCAGGAGTGACTCCCCACCGAGACAGGCCCCC 3404
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3405 CGCAGCGCTCCCTACAAAGGCTCTGAGATTCGGGGCTCCCGGAAGTCCAAGGACTGCAAGTACCCCCAGAAGCC 3478
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3479 ACACAAGTCTCGGAGCCGGAGTTCTTCCCGTTCTCGAAGCAGGTCACGGGAGCGGGCGGATAATCCGGGAAAAT 3552
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3553 ACAAGAAGAAAAGTCATTACTACAGAGATCAGCGACGAGAGCGCTCGAGGTCGTATGAACGCACAGGCCGTCGC 3626
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3627 TATGAGCGGGACCACCCTGGGCACAGCAGGCATCGGAGGTGAGGCGGGGTTGCAGTGACTGGTGGCCGCAAGCC 3700
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3701 CTTCCCTGGGGAGTACCTGATGGCTGCCCTTTGACCCCCGGTGGCTGCCCTTTGACCCCCGGGTGTGCTCTCAG 3774
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3775 CGCAAGTGGTCCTAGAACAGGATTCTTTTTGGAAATGTCTGTCGACTGGACCTTGGTGGATTTGGAAATGGAAC 3848
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3849 TGAGGGACCGGTGACACGTGCTTCAGACCGGTCTGGGGTGCGGCGCACACCTGGGCCCGTGCAGGGCTCAGCTC 3922
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3923 GGCAGCAGCTCTGAGGGCAGCTCAATGAAAAAGTGAATGCACACGCCCTTGTTGGCGTGGCCTGGCATGGCCTG 3996
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3997 GTGCTATCGGCAGCCGCTCTCCACTCCCCGACTGATACTCAATTACGTGAAGCCAAGAAAGATGATTTTTAGAA 4070
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4071 CCTTTGCCTATATTAGGTTGTACTTATGTACATATTTTGCAGTGTTTCACAGGAGAAAGTGGCCTTAACTGCCC 4144
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4145 CTTATTCTCTCTCCACGTTGTAAATAAACATGTGTTTAATACAAGTTAAAGCTATGTATGAAAACTCAGAACTT 4218
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4219 GAATCCCGTCAGCTTAAAACTTGTGTAGGGAATCCTGACTTTTAAAATGTGAGGGTATTTGGATCTGTGTTGAA 4292
Query 679 -------------------------------------------------------------------------- 678
Sbjct 4293 AGTCGTATATTTTTATCTGTGCGGTGCTGAGTGCAGGCCACCAGCTCCTAAATAGAGGTTCCCTATATGCGCGT 4366
Query 679 ---------------------------------------- 678
Sbjct 4367 ATGACATGGTGAATAAACACAACTCTCTCCACTCAGGACA 4406
