Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09188
- Subject:
- NM_001346747.2
- Aligned Length:
- 1918
- Identities:
- 1400
- Gaps:
- 515
Alignment
Query 1 ATGGCGGGCGGCGCGGGCTGGTCGGGCGCCCCCGCGGCTCTGCTGCGCTCCGTGCGCCGCCTGCGCGAGGTGTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CGAGGTGTGCGGCCGCGACCCCGACGGCTTCCTGCGCGTGGAGCGCGTCGCGGCGCTCGGACTGCGCTTCGGCC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AGGGCGAGGAGGTGGAAAAACTTGTGAAATATTTGGATCCCAACGACCTGGGGAGAATCAACTTCAAGGACTTT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TGCCGGGGGGTGTTCGCCATGAAAGGGTGCGAGGAGCTGCTGAAGGATGTGCTGTCGGTGGAGAGCGCGGGGAC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GCTGCCGTGCG-----CGCCAGAGATCCCAGACT-GCGTGGAG-CAGGGCAGCGAGGTCACAGGCCCCACCTTT 363
.|||| |||||| || .|| |||| ||||||||||||||||||||||||||||||
Sbjct 1 ------ATGCGCACCCCGCCAG----------CTCTCG-GGAGCCAGGGCAGCGAGGTCACAGGCCCCACCTTT 57
Query 364 GCTGATGGCGAGCTCATCCCCAGGGAACCCGGCTTTTTTCCCGAGGACGAGGAGGAGGCTATGACGCTGGCGCC 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 58 GCTGATGGCGAGCTCATCCCCAGGGAACCCGGCTTTTTTCCCGAGGACGAGGAGGAGGCTATGACGCTGGCGCC 131
Query 438 ACCTGAGGGCCCCCAGGAGTTGTACACAGACAGCCCCATGGAGAGCACTCAGAGCCTGGAGGGGTCTGTCGGGA 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 ACCTGAGGGCCCCCAGGAGTTGTACACAGACAGCCCCATGGAGAGCACTCAGAGCCTGGAGGGGTCTGTCGGGA 205
Query 512 GTCCTGCCGAGAAGGACGGGGGACTTGGGGGCCTGTTTCTGCCAGAAGACAAGTCCCTGGTCCACACTCCATCC 585
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 206 GTCCTGCCGAGAAGGACGGGGGACTTGGGGGCCTGTTTCTGCCAGAAGACAA---------------------- 257
Query 586 ATGACGACCTCAGACCTTTCTACACACTCCACCACCTCGCTCATCAGCAATGAGGAGCAGTTTGAAGACTATGG 659
Sbjct 258 -------------------------------------------------------------------------- 257
Query 660 GGAGGGTGACGATGTGGACTGTGCCCCCAGCAGCCCTTGCCCCGATGATGAGACCAGGACCAACGTCTACTCGG 733
Sbjct 258 -------------------------------------------------------------------------- 257
Query 734 ACCTGGGGTCTTCGGTGTCTTCCAGTGCGGGGCAGACGCCTAGGAAAATGCGGCACGTGTACAACAGCGAATTG 807
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 258 -------------------------TGCGGGGCAGACGCCTAGGAAAATGCGGCACGTGTACAACAGCGAATTG 306
Query 808 CTAGATGTTTACTGCTCTCAATGCTGCAAGAAAATCAACCTGCTCAATGACTTGGAAGCCCGACTGAAAAACCT 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 CTAGATGTTTACTGCTCTCAATGCTGCAAGAAAATCAACCTGCTCAATGACTTGGAAGCCCGACTGAAAAACCT 380
Query 882 GAAGGCCAACAGCCCCAACCGAAAGATCTCCAGCACGGCCTTTGGACGGCAGCTCATGCACAGCAGCAACTTCA 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 GAAGGCCAACAGCCCCAACCGAAAGATCTCCAGCACGGCCTTTGGACGGCAGCTCATGCACAGCAGCAACTTCA 454
Query 956 GCAGCAGCAATGGCAGCACCGAAGACCTGTTCCGGGACAGCATTGACTCTTGCGACAATGACATCACAGAGAAG 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 GCAGCAGCAATGGCAGCACCGAAGACCTGTTCCGGGACAGCATTGACTCTTGCGACAATGACATCACAGAGAAG 528
Query 1030 GTAAGCTTCCTGGAAAAGAAGGTGACAGAGCTGGAGAATGACAGCCTGACCAATGGGGACCTGAAGAGCAAGCT 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 GTAAGCTTCCTGGAAAAGAAGGTGACAGAGCTGGAGAATGACAGCCTGACCAATGGGGACCTGAAGAGCAAGCT 602
Query 1104 GAAGCAAGAGAACACACAGCTGGTGCACAGGGTGCATGAGCTGGAGGAGATGGTGAAGGATCAGGAGACCACGG 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 GAAGCAAGAGAACACACAGCTGGTGCACAGGGTGCATGAGCTGGAGGAGATGGTGAAGGATCAGGAGACCACGG 676
Query 1178 CCGAGCAGGCTCTGGAGGAGGAGGCGCGGCGCCACCGCGAGGCCTACGGCAAGCTGGAGAGGGAGAAGGCTACC 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 CCGAGCAGGCTCTGGAGGAGGAGGCGCGGCGCCACCGCGAGGCCTACGGCAAGCTGGAGAGGGAGAAGGCTACC 750
Query 1252 GAGGTGGAGCTGCTCAATGCCAGGGTGCAGCAGTTGGAGGAAGAAAATACAGAGCTTAGAACAACAGTGACTCG 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 GAGGTGGAGCTGCTCAATGCCAGGGTGCAGCAGTTGGAGGAAGAAAATACAGAGCTTAGAACAACAGTGACTCG 824
Query 1326 GCTCAAGTCTCAAACAGAGAAACTGGATGAGGAGCGGCAGCGCATGTCTGACCGTCTGGAGGACACCAGCCTGC 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 825 GCTCAAGTCTCAAACAGAGAAACTGGATGAGGAGCGGCAGCGCATGTCTGACCGTCTGGAGGACACCAGCCTGC 898
Query 1400 GGCTCAAAGATGAGATGGACCTGTACAAGCGCATGATGGACAAGCTGCGACAGAACCGCCTTGAGTTCCAGAAG 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GGCTCAAAGATGAGATGGACCTGTACAAGCGCATGATGGACAAGCTGCGACAGAACCGCCTTGAGTTCCAGAAG 972
Query 1474 GAGCGGGAGGCGACGCAGGAGCTCATCGAGGACTTGCGGAAGGAGCTGGAGCACCTGCAGATGTACAAGCTGGA 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 973 GAGCGGGAGGCGACGCAGGAGCTCATCGAGGACTTGCGGAAGGAGCTGGAGCACCTGCAGATGTACAAGCTGGA 1046
Query 1548 CTGCGAGCGGCCAGGCAGGGGCCGCAGTGCCTCCTCTGGCCTAGGCGAGTTCAATGCCAGGGCCCGCGAGGTGG 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1047 CTGCGAGCGGCCAGGCAGGGGCCGCAGTGCCTCCTCTGGCCTAGGCGAGTTCAATGCCAGGGCCCGCGAGGTGG 1120
Query 1622 AGCTCGAGCACGAGGTCAAGCGGCTCAAGCAGGAGAATTATAAGCTGCGGGATCAGAACGACGACTTGAATGGG 1695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 AGCTCGAGCACGAGGTCAAGCGGCTCAAGCAGGAGAATTATAAGCTGCGGGATCAGAACGACGACTTGAATGGG 1194
Query 1696 CAGATTTTGAGCCTCAGCCTCTACGAAGCAAAAAACCTCTTTGCTGCCCAGACTAAAGCCCAGTCTCTGGCTGC 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 CAGATTTTGAGCCTCAGCCTCTACGAAGCAAAAAACCTCTTTGCTGCCCAGACTAAAGCCCAGTCTCTGGCTGC 1268
Query 1770 AGAGATAGACACCGCCTCGCGCGATGAGCTAATGGAAGCCCTGAAGGAGCAGGAGGAGATCAACTTCCGGCTGA 1843
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 GGAGATAGACACCGCCTCGCGCGATGAGCTAATGGAAGCCCTGAAGGAGCAGGAGGAGATCAACTTCCGGCTGA 1342
Query 1844 GGCAGTACATGGACAAGATTATCCTCGCCATCCTGGACCACAATCCCTCCATCCTCGAGATCAAACAC 1911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1343 GGCAGTACATGGACAAGATTATCCTCGCCATCCTGGACCACAATCCCTCCATCCTCGAGATCAAACAC 1410