Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09276
Subject:
XM_006508228.1
Aligned Length:
1960
Identities:
1270
Gaps:
491

Alignment

Query    1  ATGGCGGGGCCGGGCGTCCCCGGTGCCCCCGCAGCGCGCTGGAAACGCCACATCGTGCGGCAGCTGCGGCTTCG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGACCGTACGCAAAAGGCGCTTTTCCTGGAGCTGGTGCCGGCCTATAACCATCTCTTAGAGAAGGCTGAGCTGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGGACAAGTTCTCAAAGAAGCTGCAGCCGGAGCCAAACAGTGTCACTCCCACCACCCACCAGGGCCCCTGGGAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GAGTCAGAGCTTGACTCAGACCAAGTCCCATCACTGGTCGCACTGAGGGTGAAGTGGCAGGAGGAGGAGGAGGG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GCTCCGGCTGGTCTGTGGTGAGATGGCCTACCAGGTGGTGGAGAAGGGCGCGGCCCTGGGCACGCTGGAGTCGG  370
                                  ||||||||||||||||||.|||||.||||.|||||.|.|||.|||.||||..
Sbjct    1  ----------------------ATGGCCTACCAGGTGGTGAAGAAGAGCGCAGCCCTAGACACCCTGCAGTCAC  52

Query  371  AGCTGCAGCAGAGGCAAAGCAGGCTGGCAGCCCTGGAGGCCCGCGTGGCGCAGCTGCGAGAGGCGCGGGCGCAG  444
            |||||.||.||.||||...||||.|||.|||||||.|||||.||||||.||||||.|..|||||||||||.|||
Sbjct   53  AGCTGGAGGAGCGGCAGGACAGGTTGGAAGCCCTGCAGGCCTGCGTGGTGCAGCTACAGGAGGCGCGGGCTCAG  126

Query  445  CAGGCCCAGCAGGTGGAGGAGTGGCGGGCGCAGAATGCGGTGCAGCGGGCAGCCTACGAGGCGCTGCGCGCGCA  518
            |||.|||.||||.|||||||..|||..|||.||||.||.|..|||.|.|.||||||.|||.||||||.|..|||
Sbjct  127  CAGTCCCGGCAGCTGGAGGAACGGCAAGCGGAGAACGCAGCACAGAGAGAAGCCTATGAGACGCTGCTCCAGCA  200

Query  519  CGTCGGGCTCCGGGAGGCGGCACTGCGCAGGCTCCAGGAAGAGGCGCGCGACCTGCTGGAGAGGCTCGTGCAGC  592
            .|..|.||.||.|||||||||||||||||||||||||||||||||.||||||.||||||||..|||.|||||||
Sbjct  201  AGCTGTGCACCAGGAGGCGGCACTGCGCAGGCTCCAGGAAGAGGCACGCGACTTGCTGGAGCAGCTTGTGCAGC  274

Query  593  GCAAGGCGCGCGCCGCGGCCGAGCGCAACCTGCGCAACGAGCGCCGGGAGCGGGCCAAGCAGGCGCGGGTGTCC  666
            |.||||||||||||||.||.||||||||.||.||.||.|||||..|.|||.|||||||.|||||.|.|||||||
Sbjct  275  GTAAGGCGCGCGCCGCCGCTGAGCGCAATCTACGTAATGAGCGTAGAGAGAGGGCCAACCAGGCTCTGGTGTCC  348

Query  667  CAGGAGCTGAAGAAGGCTGCCAAGCGGACCGTGAGCATCAGCGAGGGCCCGGACACCCTAGGCGATTGGATGAG  740
            ||||||||||||||.||.||.||||||||.|||||||||||||||..|||..||||.||||..|||.|||    
Sbjct  349  CAGGAGCTGAAGAAAGCGGCTAAGCGGACTGTGAGCATCAGCGAGATCCCAAACACTCTAGAAGATGGGA----  418

Query  741  GGAGAGAAGGGAGACTCTGGCTCTGGCCCCTG------AGCCAGAGCCCCTGGAGAAGGAAGCTTGTGAGAAGT  808
            .||.||||  ||||||.|||||||.||.||||      .|||.|||..|...||||..||..|||||||.||.|
Sbjct  419  CGAAAGAA--GAGACTGTGGCTCTAGCTCCTGCCGCTCTGCCTGAGTTCTCAGAGAGTGAGACTTGTGAAAAAT  490

Query  809  GGAAGAGGCCCTTCAGGTCTGCCTCAGCCACCTCCCTGACGCTGTCCCACTGTGTGGATGTGGTGAAGGGGCTT  882
            ||||||||||.||||||||||||||.||||||||||||||.|||||||.||||||||||||||||||||||||.
Sbjct  491  GGAAGAGGCCTTTCAGGTCTGCCTCGGCCACCTCCCTGACACTGTCCCGCTGTGTGGATGTGGTGAAGGGGCTG  564

Query  883  CTGGATTTTAAGAAGAGGAGAGGTCACTCAATTGGGGGAGCCCCTGAGCAGCGATACCAGATCATCCCTGTGTG  956
            .||||.||.|||||.||.|||||||||||..|||||||.||.|||||||||||.|||||.|.||||||||||||
Sbjct  565  TTGGACTTCAAGAAAAGAAGAGGTCACTCGGTTGGGGGCGCACCTGAGCAGCGGTACCAAAGCATCCCTGTGTG  638

Query  957  TGTGGCTGCCCGACTTCCTACCCGGGCTCAGGATGTGCTGGATGCCCACCTCTCTGAGGTCAATGCTGTTCGTT  1030
            ||||.||||||.|.||||..|||.||||||||||||..||||||||||.|||||||||||||||||||||.|||
Sbjct  639  TGTGTCTGCCCAAATTCCCTCCCAGGCTCAGGATGTCTTGGATGCCCATCTCTCTGAGGTCAATGCTGTTTGTT  712

Query 1031  TTGGCCCCAACAGCAGCCTCCTGGCCACTGGAGGGGCTGACCGCCTGATCCACCTCTGGAATGTTGTGGGAAGT  1104
            |||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||.||
Sbjct  713  TTGGCCCCAACAGCAGCCTCCTGGCCACTGGAGGGGCTGACCGGCTGATCCACCTCTGGAATGTTGTAGGAGGT  786

Query 1105  CGCCTGGAGGCCAACCAGACCCTGGAGGGAGCTGGTGGCAGCATCACCAGTGTGGACTTTGACCCCTCGGGCTA  1178
            ||||||||||||||||||||||||||.||||||||.||||||||||||||||||||.|||||||||||.||||.
Sbjct  787  CGCCTGGAGGCCAACCAGACCCTGGAAGGAGCTGGCGGCAGCATCACCAGTGTGGATTTTGACCCCTCAGGCTC  860

Query 1179  CCAGGTTTTAGCAGCAACTTACAACCAGGCTGCCCAGCTCTGGAAGGTGGGGGAGGCACAGTCCAAGGAGACAC  1252
            |||||||||.|||||.|||||||||||||||||||||||||||||||||||.|||.|.|||||||||||.|||.
Sbjct  861  CCAGGTTTTGGCAGCTACTTACAACCAGGCTGCCCAGCTCTGGAAGGTGGGAGAGACTCAGTCCAAGGAAACAT  934

Query 1253  TGTCTGGACACAAGGATAAGGTGACAGCTGCCAAATTCAAGCTAACGAGGCACCAGGCAGTGACTGGGAGCCGC  1326
            ||||.|||||||||||.||.|||||.||||||||||||||||||||.||||||||||||||||||||||||||.
Sbjct  935  TGTCCGGACACAAGGACAAAGTGACTGCTGCCAAATTCAAGCTAACAAGGCACCAGGCAGTGACTGGGAGCCGA  1008

Query 1327  GACCGGACAGTGAAGGAGTGGGACCTCGGCCGTGCCTATTGCTCCAGGACCATCAATGTCCTTTCCTACTGTAA  1400
            ||||||||||||||||||||||||||.|||||.|||||.||.||||||||.||||||||.|||||||||||.||
Sbjct 1009  GACCGGACAGTGAAGGAGTGGGACCTGGGCCGCGCCTACTGTTCCAGGACTATCAATGTACTTTCCTACTGCAA  1082

Query 1401  TGACGTGGTGTGTGGGGACCATATCATCATTAGTGGCCACAATGACCAGAAGATCCGGTTCTGGGACAGCAGGG  1474
            ||||||||||||.||||||||.||||||||.|||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1083  TGACGTGGTGTGCGGGGACCACATCATCATCAGTGGCCACAATGACCAAAAGATCCGGTTCTGGGACAGCAGGG  1156

Query 1475  GGCCCCACTGCACCCAGGTCATCCCTGTGCAGGGCCGGGTCACCTCCCTGAGCCTCAGCCACGACCAACTGCAC  1548
            |.||.|||||||.||||||||||||.||||||||||||||.|||||||||..|||||||.|.|||||.|||||.
Sbjct 1157  GCCCTCACTGCATCCAGGTCATCCCCGTGCAGGGCCGGGTTACCTCCCTGCACCTCAGCTATGACCAGCTGCAT  1230

Query 1549  CTGCTCAGCTGTTCCCGAGACAACACACTCAAGGTCATCGACCTGCGTGTCAGCAACATCCGCCAGGTGTTCAG  1622
            |||||.|||||||||||||||||||||||||||||.|||||||||||..|||||||.|||||.|||||||||||
Sbjct 1231  CTGCTTAGCTGTTCCCGAGACAACACACTCAAGGTTATCGACCTGCGAATCAGCAATATCCGACAGGTGTTCAG  1304

Query 1623  GGCCGATGGCTTCAAGTGTGGTTCTGACTGGACCAAAGCTGTGTTCAGCCCGGACAGAAGCTATGCACTGGCAG  1696
            |||.||||||||||||||..|||||||||||||||||||||||||                          |||
Sbjct 1305  GGCAGATGGCTTCAAGTGCAGTTCTGACTGGACCAAAGCTGTGTT--------------------------CAG  1352

Query 1697  GCTCCTGTGATGGGGCCCTTTACATCTGGGATGTGGACACCGGGAAACTGGAGAGCAGACTACAGGGACCCCAT  1770
            ||||.|...|.||.|.|||.|||||||||||||||.||||||||||||||||||.|||.||||||||||||||.
Sbjct 1353  GCTCTTCAAACGGCGACCTGTACATCTGGGATGTGAACACCGGGAAACTGGAGACCAGCCTACAGGGACCCCAC  1426

Query 1771  T-------------------------------------------------------------------------  1771
            |                                                                         
Sbjct 1427  TGAGGCTTCTCAAACCGCCTGCTGGTTGGATGTCCAGGGTCAGAGTAAGGCTGCCTGCCTGCTCCTGCTGCCCT  1500

Query 1772  ------------------------GCGCTGCCGTCAACGCCGTGGCCTGGTGCTACTCCGGGAGCCACATGGTG  1821
                                    ||.||||.||.||.||||||||.|||||||.||||||||.||||.|.|  
Sbjct 1501  CCTGAGGTCTGTCTTCCCTCTTCAGCACTGCTGTTAATGCCGTGGCTTGGTGCTTCTCCGGGAACCACGTTG--  1572

Query 1822  AGCGTGGACCAGGGCAGGAAGGTTGTGCTCTGGCAG  1857
                                                
Sbjct 1573  ------------------------------------  1572

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