Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09276
- Subject:
- XM_006508230.1
- Aligned Length:
- 1960
- Identities:
- 1270
- Gaps:
- 491
Alignment
Query 1 ATGGCGGGGCCGGGCGTCCCCGGTGCCCCCGCAGCGCGCTGGAAACGCCACATCGTGCGGCAGCTGCGGCTTCG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGACCGTACGCAAAAGGCGCTTTTCCTGGAGCTGGTGCCGGCCTATAACCATCTCTTAGAGAAGGCTGAGCTGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGGACAAGTTCTCAAAGAAGCTGCAGCCGGAGCCAAACAGTGTCACTCCCACCACCCACCAGGGCCCCTGGGAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAGTCAGAGCTTGACTCAGACCAAGTCCCATCACTGGTCGCACTGAGGGTGAAGTGGCAGGAGGAGGAGGAGGG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GCTCCGGCTGGTCTGTGGTGAGATGGCCTACCAGGTGGTGGAGAAGGGCGCGGCCCTGGGCACGCTGGAGTCGG 370
||||||||||||||||||.|||||.||||.|||||.|.|||.|||.||||..
Sbjct 1 ----------------------ATGGCCTACCAGGTGGTGAAGAAGAGCGCAGCCCTAGACACCCTGCAGTCAC 52
Query 371 AGCTGCAGCAGAGGCAAAGCAGGCTGGCAGCCCTGGAGGCCCGCGTGGCGCAGCTGCGAGAGGCGCGGGCGCAG 444
|||||.||.||.||||...||||.|||.|||||||.|||||.||||||.||||||.|..|||||||||||.|||
Sbjct 53 AGCTGGAGGAGCGGCAGGACAGGTTGGAAGCCCTGCAGGCCTGCGTGGTGCAGCTACAGGAGGCGCGGGCTCAG 126
Query 445 CAGGCCCAGCAGGTGGAGGAGTGGCGGGCGCAGAATGCGGTGCAGCGGGCAGCCTACGAGGCGCTGCGCGCGCA 518
|||.|||.||||.|||||||..|||..|||.||||.||.|..|||.|.|.||||||.|||.||||||.|..|||
Sbjct 127 CAGTCCCGGCAGCTGGAGGAACGGCAAGCGGAGAACGCAGCACAGAGAGAAGCCTATGAGACGCTGCTCCAGCA 200
Query 519 CGTCGGGCTCCGGGAGGCGGCACTGCGCAGGCTCCAGGAAGAGGCGCGCGACCTGCTGGAGAGGCTCGTGCAGC 592
.|..|.||.||.|||||||||||||||||||||||||||||||||.||||||.||||||||..|||.|||||||
Sbjct 201 AGCTGTGCACCAGGAGGCGGCACTGCGCAGGCTCCAGGAAGAGGCACGCGACTTGCTGGAGCAGCTTGTGCAGC 274
Query 593 GCAAGGCGCGCGCCGCGGCCGAGCGCAACCTGCGCAACGAGCGCCGGGAGCGGGCCAAGCAGGCGCGGGTGTCC 666
|.||||||||||||||.||.||||||||.||.||.||.|||||..|.|||.|||||||.|||||.|.|||||||
Sbjct 275 GTAAGGCGCGCGCCGCCGCTGAGCGCAATCTACGTAATGAGCGTAGAGAGAGGGCCAACCAGGCTCTGGTGTCC 348
Query 667 CAGGAGCTGAAGAAGGCTGCCAAGCGGACCGTGAGCATCAGCGAGGGCCCGGACACCCTAGGCGATTGGATGAG 740
||||||||||||||.||.||.||||||||.|||||||||||||||..|||..||||.||||..|||.|||
Sbjct 349 CAGGAGCTGAAGAAAGCGGCTAAGCGGACTGTGAGCATCAGCGAGATCCCAAACACTCTAGAAGATGGGA---- 418
Query 741 GGAGAGAAGGGAGACTCTGGCTCTGGCCCCTG------AGCCAGAGCCCCTGGAGAAGGAAGCTTGTGAGAAGT 808
.||.|||| ||||||.|||||||.||.|||| .|||.|||..|...||||..||..|||||||.||.|
Sbjct 419 CGAAAGAA--GAGACTGTGGCTCTAGCTCCTGCCGCTCTGCCTGAGTTCTCAGAGAGTGAGACTTGTGAAAAAT 490
Query 809 GGAAGAGGCCCTTCAGGTCTGCCTCAGCCACCTCCCTGACGCTGTCCCACTGTGTGGATGTGGTGAAGGGGCTT 882
||||||||||.||||||||||||||.||||||||||||||.|||||||.||||||||||||||||||||||||.
Sbjct 491 GGAAGAGGCCTTTCAGGTCTGCCTCGGCCACCTCCCTGACACTGTCCCGCTGTGTGGATGTGGTGAAGGGGCTG 564
Query 883 CTGGATTTTAAGAAGAGGAGAGGTCACTCAATTGGGGGAGCCCCTGAGCAGCGATACCAGATCATCCCTGTGTG 956
.||||.||.|||||.||.|||||||||||..|||||||.||.|||||||||||.|||||.|.||||||||||||
Sbjct 565 TTGGACTTCAAGAAAAGAAGAGGTCACTCGGTTGGGGGCGCACCTGAGCAGCGGTACCAAAGCATCCCTGTGTG 638
Query 957 TGTGGCTGCCCGACTTCCTACCCGGGCTCAGGATGTGCTGGATGCCCACCTCTCTGAGGTCAATGCTGTTCGTT 1030
||||.||||||.|.||||..|||.||||||||||||..||||||||||.|||||||||||||||||||||.|||
Sbjct 639 TGTGTCTGCCCAAATTCCCTCCCAGGCTCAGGATGTCTTGGATGCCCATCTCTCTGAGGTCAATGCTGTTTGTT 712
Query 1031 TTGGCCCCAACAGCAGCCTCCTGGCCACTGGAGGGGCTGACCGCCTGATCCACCTCTGGAATGTTGTGGGAAGT 1104
|||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||.||
Sbjct 713 TTGGCCCCAACAGCAGCCTCCTGGCCACTGGAGGGGCTGACCGGCTGATCCACCTCTGGAATGTTGTAGGAGGT 786
Query 1105 CGCCTGGAGGCCAACCAGACCCTGGAGGGAGCTGGTGGCAGCATCACCAGTGTGGACTTTGACCCCTCGGGCTA 1178
||||||||||||||||||||||||||.||||||||.||||||||||||||||||||.|||||||||||.||||.
Sbjct 787 CGCCTGGAGGCCAACCAGACCCTGGAAGGAGCTGGCGGCAGCATCACCAGTGTGGATTTTGACCCCTCAGGCTC 860
Query 1179 CCAGGTTTTAGCAGCAACTTACAACCAGGCTGCCCAGCTCTGGAAGGTGGGGGAGGCACAGTCCAAGGAGACAC 1252
|||||||||.|||||.|||||||||||||||||||||||||||||||||||.|||.|.|||||||||||.|||.
Sbjct 861 CCAGGTTTTGGCAGCTACTTACAACCAGGCTGCCCAGCTCTGGAAGGTGGGAGAGACTCAGTCCAAGGAAACAT 934
Query 1253 TGTCTGGACACAAGGATAAGGTGACAGCTGCCAAATTCAAGCTAACGAGGCACCAGGCAGTGACTGGGAGCCGC 1326
||||.|||||||||||.||.|||||.||||||||||||||||||||.||||||||||||||||||||||||||.
Sbjct 935 TGTCCGGACACAAGGACAAAGTGACTGCTGCCAAATTCAAGCTAACAAGGCACCAGGCAGTGACTGGGAGCCGA 1008
Query 1327 GACCGGACAGTGAAGGAGTGGGACCTCGGCCGTGCCTATTGCTCCAGGACCATCAATGTCCTTTCCTACTGTAA 1400
||||||||||||||||||||||||||.|||||.|||||.||.||||||||.||||||||.|||||||||||.||
Sbjct 1009 GACCGGACAGTGAAGGAGTGGGACCTGGGCCGCGCCTACTGTTCCAGGACTATCAATGTACTTTCCTACTGCAA 1082
Query 1401 TGACGTGGTGTGTGGGGACCATATCATCATTAGTGGCCACAATGACCAGAAGATCCGGTTCTGGGACAGCAGGG 1474
||||||||||||.||||||||.||||||||.|||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1083 TGACGTGGTGTGCGGGGACCACATCATCATCAGTGGCCACAATGACCAAAAGATCCGGTTCTGGGACAGCAGGG 1156
Query 1475 GGCCCCACTGCACCCAGGTCATCCCTGTGCAGGGCCGGGTCACCTCCCTGAGCCTCAGCCACGACCAACTGCAC 1548
|.||.|||||||.||||||||||||.||||||||||||||.|||||||||..|||||||.|.|||||.|||||.
Sbjct 1157 GCCCTCACTGCATCCAGGTCATCCCCGTGCAGGGCCGGGTTACCTCCCTGCACCTCAGCTATGACCAGCTGCAT 1230
Query 1549 CTGCTCAGCTGTTCCCGAGACAACACACTCAAGGTCATCGACCTGCGTGTCAGCAACATCCGCCAGGTGTTCAG 1622
|||||.|||||||||||||||||||||||||||||.|||||||||||..|||||||.|||||.|||||||||||
Sbjct 1231 CTGCTTAGCTGTTCCCGAGACAACACACTCAAGGTTATCGACCTGCGAATCAGCAATATCCGACAGGTGTTCAG 1304
Query 1623 GGCCGATGGCTTCAAGTGTGGTTCTGACTGGACCAAAGCTGTGTTCAGCCCGGACAGAAGCTATGCACTGGCAG 1696
|||.||||||||||||||..||||||||||||||||||||||||| |||
Sbjct 1305 GGCAGATGGCTTCAAGTGCAGTTCTGACTGGACCAAAGCTGTGTT--------------------------CAG 1352
Query 1697 GCTCCTGTGATGGGGCCCTTTACATCTGGGATGTGGACACCGGGAAACTGGAGAGCAGACTACAGGGACCCCAT 1770
||||.|...|.||.|.|||.|||||||||||||||.||||||||||||||||||.|||.||||||||||||||.
Sbjct 1353 GCTCTTCAAACGGCGACCTGTACATCTGGGATGTGAACACCGGGAAACTGGAGACCAGCCTACAGGGACCCCAC 1426
Query 1771 T------------------------------------------------------------------------- 1771
|
Sbjct 1427 TGAGGCTTCTCAAACCGCCTGCTGGTTGGATGTCCAGGGTCAGAGTAAGGCTGCCTGCCTGCTCCTGCTGCCCT 1500
Query 1772 ------------------------GCGCTGCCGTCAACGCCGTGGCCTGGTGCTACTCCGGGAGCCACATGGTG 1821
||.||||.||.||.||||||||.|||||||.||||||||.||||.|.|
Sbjct 1501 CCTGAGGTCTGTCTTCCCTCTTCAGCACTGCTGTTAATGCCGTGGCTTGGTGCTTCTCCGGGAACCACGTTG-- 1572
Query 1822 AGCGTGGACCAGGGCAGGAAGGTTGTGCTCTGGCAG 1857
Sbjct 1573 ------------------------------------ 1572
