Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09322
Subject:
NR_038354.2
Aligned Length:
2436
Identities:
1448
Gaps:
988

Alignment

Query    1  ---------------------------ATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCA  47
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  AGGGCAGGATGAACGCTGCTTTCCAAGATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCA  74

Query   48  ATTCACCACCCGGGAAGGTCTGTACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCA  121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  ATTCACCACCCGGGAAGGTCTGTACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCA  148

Query  122  ACTCGCAGGGATCCAACCCTGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTC  195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACTCGCAGGGATCCAACCCTGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTC  222

Query  196  TGCTTCAATGTGGGCCGGGAGCTGTACTTCTATATCTACAAGGGGGTCCGCA----------------------  247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||                      
Sbjct  223  TGCTTCAATGTGGGCCGGGAGCTGTACTTCTATATCTACAAGGGGGTCCGCAAGACAATCCCATGAGGTTGGTA  296

Query  248  ------------------------------AGGCTGCTGACTTGAGTAAACCAATAGATAAAAGGATATACAAA  291
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAACAGAGATTCTCATCTCCGTTTTAACTGAGGCTGCTGACTTGAGTAAACCAATAGATAAAAGGATATACAAA  370

Query  292  GGAACACAGCCTACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAAAGTGTCTCTCTCCTAGTGGGCTT  365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGAACACAGCCTACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAAAGTGTCTCTCTCCTAGTGGGCTT  444

Query  366  TTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAAAAAGAAACTAGCAAACTTTTTAATGAGGAAAGACTAA  439
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct  445  TTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAAAAAGAAACTAGCAAACTTTTTAATGAGGAA-------  511

Query  440  TAGACAAGTCACGAGTTACCTGTGTCAAATGGGTTCACGGTTCGGAAAGCCTTTTCCTAGTAGCCCACTCGAGT  513
                                                                                      
Sbjct  512  --------------------------------------------------------------------------  511

Query  514  GGGAACATGTACTTATATAATGTGGAGCACACTTGTGGCACCACAGCCCCCCACTACCAGCTTCTGAAGCAGGG  587
                                                                                      
Sbjct  512  --------------------------------------------------------------------------  511

Query  588  AGAGAGCTTTGCCGTGCACACTTGCAAGAGCAAATCCACGAGGAACCCTCTCCTTAAGTGGACGGTGGGCGAGG  661
                                                                                      
Sbjct  512  --------------------------------------------------------------------------  511

Query  662  GGGCCCTCAACGAGTTTGCTTTCTCCCCAGATGGCAAGTTCTTAGCGTGCGTGAGCCAGGACGGGTTTCTGCGG  735
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  512  ------------------------------ATGGCAAGTTCTTAGCGTGCGTGAGCCAGGACGGGTTTCTGCGG  555

Query  736  GTGTTCAACTTTGACTCAGTGGAGCTGCACGGTACGATGAAAAGCTACTTTGGGGGCTTGCTGTGTGTGTGCTG  809
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  556  GTGTTCAACTTTGACTCAGTGGAGCTGCACGGTACGATGAAAAGCTACTTTGGGGGCTTGCTGTGTGTGTGCTG  629

Query  810  GAGCCCGGATGGCAAGTACATCGTGACAGGTGGGGAGGACGACTTGGTGACAGTCTGGTCCTTTGTAGACTGCC  883
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  630  GAGCCCGGATGGCAAGTACATCGTGACAGGTGGGGAGGACGACTTGGTGACAGTCTGGTCCTTTGTAGACTGCC  703

Query  884  GAGTAATAGCCAGAGGCCACGGGCACAAGTCCTGGGTCAGTGTTGTAGCGTTTGACCCTTATACCACTAGTGTA  957
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  704  GAGTAATAGCCAGAGGCCACGGGCACAAGTCCTGGGTCAGTGTTGTAGCGTTTGACCCTTATACCACTAGTGTA  777

Query  958  GAAGAAGGTGACCCTATGGAGTTTAGTGGCAGCGATGAGGACTTCCAAGACCTTCTTCATTTTGGCAGAGATCG  1031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  778  GAAGAAGGTGACCCTATGGAGTTTAGTGGCAGCGATGAGGACTTCCAAGACCTTCTTCATTTTGGCAGAGATCG  851

Query 1032  AGCAAATAGTACACAGTCCAGGCTCTCCAAACGGAACTCTACAGACAGCCGCCCCGTAAGTGTCACGTATCGGT  1105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  852  AGCAAATAGTACACAGTCCAGGCTCTCCAAACGGAACTCTACAGACAGCCGCCCCGTAAGTGTCACGTATCGGT  925

Query 1106  TTGGTTCCGTGGGCCAGGACACACAGCTCTGTTTATGGGACCTTACAGAAGATATCCTTTTCCCTCACCAACCC  1179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  926  TTGGTTCCGTGGGCCAGGACACACAGCTCTGTTTATGGGACCTTACAGAAGATATCCTTTTCCCTCACCAACCC  999

Query 1180  CTCTCAAGAGCAAGGACACACACAAATGTCATGAATGCCACGAGTCCTCCTGCTGGAAGCAATGGGAACAGTGT  1253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000  CTCTCAAGAGCAAGGACACACACAAATGTCATGAATGCCACGAGTCCTCCTGCTGGAAGCAATGGGAACAGTGT  1073

Query 1254  TACAACACCCGGGAACTCTGTGCCGCCTCCTCTGCCACGGTCCAACAGCCTTCCACATTCAGCAGTCTCAAATG  1327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1074  TACAACACCCGGGAACTCTGTGCCGCCTCCTCTGCCACGGTCCAACAGCCTTCCACATTCAGCAGTCTCAAATG  1147

Query 1328  CTGGCAGCAAAAGCAGTGTCATGGACGGGGCCATTGCTTCTGGGGTCAGCAAATTTGCAACACTTTCACTACAT  1401
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148  CTGGCAGCAAAAGCAGTGTCATGGACGGGGCCATTGCTTCTGGGGTCAGCAAATTTGCAACACTTTCACTACAT  1221

Query 1402  GACCGGAAGGAGAGGCACCACGAGAAAGATCACAAGCGAAATCATAGCATGGGACACATTTCTAGCAAGAGCAG  1475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1222  GACCGGAAGGAGAGGCACCACGAGAAAGATCACAAGCGAAATCATAGCATGGGACACATTTCTAGCAAGAGCAG  1295

Query 1476  TGACAAACTGAATCTAGTTACCAAAACCAAAACGGACCCTGCTAAAACTCTGGGAACGCCCCTGTGTCCTCGAA  1549
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1296  TGACAAACTGAATCTAGTTACCAAAACCAAAACGGACCCTGCTAAAACTCTGGGAACGCCCCTGTGTCCTCGAA  1369

Query 1550  TGGAAGATGTTCCCTTGTTAGAGCCGCTGATATGTAAAAAGATAGCACATGAGAGACTGACTGTACTAATATTT  1623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1370  TGGAAGATGTTCCCTTGTTAGAGCCGCTGATATGTAAAAAGATAGCACATGAGAGACTGACTGTACTAATATTT  1443

Query 1624  CTTGAAGACTGTATAGTCACTGCTTGTCAGGAGGGATTTATTTGCACATGGGGAAGGCCTGGTAAAGTGGTAAG  1697
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1444  CTTGAAGACTGTATAGTCACTGCTTGTCAGGAGGGATTTATTTGCACATGGGGAAGGCCTGGTAAAGTGGTAAG  1517

Query 1698  TTTTAATCCT----------------------------------------------------------------  1707
            ||||||||||                                                                
Sbjct 1518  TTTTAATCCTTAATGCTGCACCAGATCTAGAACTTGAATAGGTAGTGACTTTTTTCTTTTTCGTGGGAGGGGTG  1591

Query 1708  --------------------------------------------------------------------------  1707
                                                                                      
Sbjct 1592  GGGTGTACAATGAATGTGAATGACACTTCTTATTCTTAATGTAAATCTCAATGCATCAGAGCCATAATTTTGGA  1665

Query 1708  --------------------------------------------------------------------------  1707
                                                                                      
Sbjct 1666  TACTGCATGCCATGTAATTCTGAATCATTTGATAATTTACCTTAGAGCATTTAAAAAAATATAATCAAACTAAT  1739

Query 1708  --------------------------------------------------------------------------  1707
                                                                                      
Sbjct 1740  TGCCAGCCAAGTCAGTCATCCTCCTGGGAGTATATAGAGTCCCAAGGTTAGCGCTCCTGTATTAGACTATTTCA  1813

Query 1708  --------------------------------------------------------------------------  1707
                                                                                      
Sbjct 1814  ATTTTAGGAAAATCATGACCATGTGGGGAAACAATGACTTTAAAATGCTGAAATTAAAATTTATGCTTTAACTG  1887

Query 1708  --------------------------------------------------------------------------  1707
                                                                                      
Sbjct 1888  GAATATTTTTTGCTTAACTACTCAATTAGAATATTGTACACCTGATCAATGTGTGTTCAGCACAGATGGCCATG  1961

Query 1708  --------------------------------------------------------------------------  1707
                                                                                      
Sbjct 1962  AATTGTCATTTATAGTCCAATTTTTTATCTTAATCATAAAATGTTTAGGAATCTATGAAATTTAACTTTAGGAA  2035

Query 1708  --------------------------------------------------------------------------  1707
                                                                                      
Sbjct 2036  CAAAACGTTTAGCAGGGTTGATTGATATTATTTTTACATTGTTCTGGCAATCCACAGAAAGAGAAGAGCCTTAA  2109

Query 1708  --------------------------------------------------------------------  1707
                                                                                
Sbjct 2110  TTTTTAAAACCCATTTTAGTCATTTTATGACAATTAAAGTTGTTTAATAAACATCTTTTTTCAAAGAA  2177

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