Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09411
Subject:
XM_006529700.2
Aligned Length:
2379
Identities:
2064
Gaps:
15

Alignment

Query    1  ATGAGCCAGCCCAGGCCCCGCTACGTGGTAGACAGAGCCGCATACTCCCTTACCCTCTTCGACGATGAGTTTGA  74
            ||||.|||||||||||||||||||||||||||||||||.||.||||||||..||||||||||.|||||||||||
Sbjct    1  ATGAACCAGCCCAGGCCCCGCTACGTGGTAGACAGAGCTGCGTACTCCCTCTCCCTCTTCGATGATGAGTTTGA  74

Query   75  GAAGAAGGACCGGACATACCCAGTGGGAGAGAAACTTCGCAATGCCTTCAGATGTTCCTCAGCCAAGATCAAAG  148
            ||||||||||||..|.|||||.|||||||||||.||||||||..|.|||||.||.||||||||||||.||||||
Sbjct   75  GAAGAAGGACCGTGCCTACCCGGTGGGAGAGAAGCTTCGCAACACTTTCAGGTGCTCCTCAGCCAAGTTCAAAG  148

Query  149  CTGTGGTGTTTGGGCTGCTGCCTGTGCTCTCCTGGCTCCCCAACTACAAGATTAAAGACTACATCATTCCTGAC  222
            |..|.||||||||||||.||||||||||||||||||||||.||.||||||||.||||||||||||||.||||||
Sbjct  149  CCTTTGTGTTTGGGCTGTTGCCTGTGCTCTCCTGGCTCCCTAAATACAAGATCAAAGACTACATCATCCCTGAC  222

Query  223  CTGCTCGGTGGACTCAGCGGGGGATCCATCCAGGTCCCACAAGGCATGGCATTTGCTCTGCTGGCCAACCTTCC  296
            .||||.|||||||||||.||.||.|..||||||||.||||||||||||||||||||..||||||||||||||||
Sbjct  223  TTGCTGGGTGGACTCAGTGGAGGGTGTATCCAGGTGCCACAAGGCATGGCATTTGCATTGCTGGCCAACCTTCC  296

Query  297  TGCAGTCAATGGCCTCTACTCCTCCTTCTTCCCCCTCCTGACCTACTTCTTCCTGGGGGGTGTTCACCAGATGG  370
            |||.|||||.||.||||||||||||||||||||||||||||||||.||||||.|.||||||.||||||||||||
Sbjct  297  TGCTGTCAACGGTCTCTACTCCTCCTTCTTCCCCCTCCTGACCTATTTCTTCTTAGGGGGTATTCACCAGATGG  370

Query  371  TGCCAGGTACCTTTGCCGTTATCAGCATCCTGGTGGGTAACATCTGTCTGCAGCTGGCCCCAGAGTCGAAATTC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGCCAGGTACCTTTGCCGTTATCAGCATCCTGGTGGGTAACATCTGTCTGCAGCTGGCCCCAGAGTCGAAATTC  444

Query  445  CAGGTCTTCAACAATGCCACCAATGAGAGCTATGTGGACACAGCAGCCATGGAGGCTGAGAGGCTGCACGTGTC  518
            |||.||||||||||||.|||||||||||.|||.|||||||||||||||||||||||.||.||.|||||.|||||
Sbjct  445  CAGATCTTCAACAATGTCACCAATGAGACCTACGTGGACACAGCAGCCATGGAGGCAGAAAGACTGCATGTGTC  518

Query  519  AGCTACGCTAGCCTGCCTCACCGCCATCATCCAGATGGGTCTGGGCTTCATGCAGTTTGGCTTTGTGGCCATCT  592
            .||.||.||.||||||||.||.||..||||||||||||...|||||||||||||||||||||||||.|||||||
Sbjct  519  TGCGACACTTGCCTGCCTGACTGCTGTCATCCAGATGGCCTTGGGCTTCATGCAGTTTGGCTTTGTTGCCATCT  592

Query  593  ACCTCTCCGAGTCCTTCATCCGGGGCTTCATGACGGCCGCCGGCCTGCAGATCCTGATTTCGGTGCTCAAGTAC  666
            |||||||.||||||||.|||||||||||||||||.|||||.|||||||||||.||.||.||.||||||||||||
Sbjct  593  ACCTCTCTGAGTCCTTTATCCGGGGCTTCATGACAGCCGCTGGCCTGCAGATTCTCATCTCTGTGCTCAAGTAC  666

Query  667  ATCTTCGGACTGACCATCCCCTCCTACACAGGCCCAGGGTCCATCGTCTTTACCTTCATTGACATTTGCAAAAA  740
            |||||.||.||||||||.||||||||.||||||||.||.|||||||||||||||||||||||||||||||||||
Sbjct  667  ATCTTTGGTCTGACCATTCCCTCCTATACAGGCCCTGGCTCCATCGTCTTTACCTTCATTGACATTTGCAAAAA  740

Query  741  CCTCCCCCACACCAACATCGCCTCGCTCATCTTCGCTCTCATCAGCGGTGCCTTCCTGGTGCTGGTGAAGGAGC  814
            |||||||||||||||||||||||||||||||||.||.||..|||||||||.|||||||||||||||||||||.|
Sbjct  741  CCTCCCCCACACCAACATCGCCTCGCTCATCTTTGCCCTGGTCAGCGGTGTCTTCCTGGTGCTGGTGAAGGAAC  814

Query  815  TCAATGCTCGCTACATGCACAAGATTCGCTTCCCCATCCCTACAGAGATGATTGTGGTGGTGGTGGCAACAGCT  888
            ||||.|||||.||||||||||||||.|.|||||||||||||||||||||||||||||||||.||.|||||.|||
Sbjct  815  TCAACGCTCGGTACATGCACAAGATCCACTTCCCCATCCCTACAGAGATGATTGTGGTGGTAGTTGCAACCGCT  888

Query  889  ATCTCCGGGGGCTGTAAGATGCCCAAAAAGTATCACATGCAGATCGTGGGAGAAATCCAACGCGGGTTCCCCAC  962
            |||||.|||.||||.||||||||.|||||.||.|||||||||||.|||||.||.||||.||..|||||.|||||
Sbjct  889  ATCTCTGGGAGCTGCAAGATGCCAAAAAAATACCACATGCAGATTGTGGGGGAGATCCGACAAGGGTTTCCCAC  962

Query  963  CCCGGTGTCGCCTGTGGTCTCACAGTGGAAGGACATGATAGGCACAGCCTTCTCCCTAGCCATCGTGAGCTACG  1036
            .||||||.|.||..||||.||.|||||||||||||||.|.|||||||||||||||||.||.||.|||.||||.|
Sbjct  963  TCCGGTGGCACCGATGGTTTCGCAGTGGAAGGACATGGTGGGCACAGCCTTCTCCCTGGCAATTGTGGGCTATG  1036

Query 1037  TCATCAACCTGGCTATGGGCCGGACCCTGGCCAACAAGCACGGCTACGACGTGGATTCGAACCAGGAGATGATC  1110
            |||||||.||||||||||||||.||||||||||.||||||.|||||.||.||||||||.||||||||||||||.
Sbjct 1037  TCATCAATCTGGCTATGGGCCGCACCCTGGCCAGCAAGCATGGCTATGATGTGGATTCTAACCAGGAGATGATT  1110

Query 1111  GCTCTCGGCTGCAGCAACTTCTTTGGCTCCTTCTTTAAAATTCATGTCATTTGCTGTGCGCTTTCTGTCACTCT  1184
            ||.||.|||||.|||||||||||.||||||||.||.||.||.||.|||||||||||.||.||.||.|||||.||
Sbjct 1111  GCCCTGGGCTGTAGCAACTTCTTCGGCTCCTTTTTCAAGATCCACGTCATTTGCTGCGCTCTCTCAGTCACACT  1184

Query 1185  GGCTGTGGATGGAGCTGGAGGAAAATCCCAGGTGGCCAGCCTGTGTGTGTCTCTGGTGGTGATGATCACCATGC  1258
            ||||||||||||.||||||||.||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1185  GGCTGTGGATGGGGCTGGAGGGAAATCCCAGGTGGCCAGCTTGTGTGTGTCTCTGGTGGTGATGATCACCATGC  1258

Query 1259  TGGTCCTGGGGAT-CTATCTGTATCCTCTCCCTAAGTCTGTGCTAGGAGCCCTGATCGCTGTCAATCTCAAGAA  1331
            ||||||| ||||| |||||||||.||||||||.|||.||||||||||.||||||||||||||||||||||||||
Sbjct 1259  TGGTCCT-GGGATCCTATCTGTACCCTCTCCCCAAGGCTGTGCTAGGTGCCCTGATCGCTGTCAATCTCAAGAA  1331

Query 1332  CTCCCTCAAGCAACTCACCGACCCCTACTACCTGTGGAGGAAGAGCAAGCTGGACTGTTGCATCTGGGTAGTGA  1405
            ||||||.|||||.|||||.||||||||||||||.|||||||||||.|||||.||||||||..|||||||.||||
Sbjct 1332  CTCCCTGAAGCAGCTCACTGACCCCTACTACCTCTGGAGGAAGAGTAAGCTAGACTGTTGTGTCTGGGTGGTGA  1405

Query 1406  GCTTCCTCTCCTCCTTCTTCCTCAGCCTGCCCTATGGTGTGGCAGTGGGTGTCGCCTTCTCCGTCCTGGTCGTG  1479
            |||||||||||||.||||||||.|||||||||||.|||||.|||||||||||.|||||||||.|||||||.|||
Sbjct 1406  GCTTCCTCTCCTCGTTCTTCCTGAGCCTGCCCTACGGTGTCGCAGTGGGTGTAGCCTTCTCCATCCTGGTTGTG  1479

Query 1480  GTCTTCCAGACTCAGTTTCGAAATGGCTATGCACTGGCCCAGGTCATGGACACTGACATTTATGTGAATCCCAA  1553
            .||||||||||.||||||||||||||||...||||||||||||||||||||||.|||||.||||||||.|||||
Sbjct 1480  ATCTTCCAGACCCAGTTTCGAAATGGCTCCACACTGGCCCAGGTCATGGACACGGACATCTATGTGAACCCCAA  1553

Query 1554  GACCTATAATAGGGCCCAGGATATCCAGGGGATTAAAATCATCACGTACTGCTCCCCTCTCTACTTTGCCAACT  1627
            ||||||.||.|||||||||||.||...|||..||||.||..||||.||||||||||||||||||||||||||||
Sbjct 1554  GACCTACAACAGGGCCCAGGAAATTGCGGGAGTTAAGATTGTCACTTACTGCTCCCCTCTCTACTTTGCCAACT  1627

Query 1628  CAGAGATCTTCAGGCAAAAGGTCATCGCCAAGACAGGCATGGACCCCCAGAAAGTATTACTAGCCAAGCAAAAA  1701
            |||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||.||||||||.|||
Sbjct 1628  CAGAGATCTTCAGGCAAAAAGTCATTGCCAAGACAGGTATGGACCCCCAGAAAGTATTACTCGCCAAGCAGAAA  1701

Query 1702  TACCTCAAGAAGCAGGAGAAGCGGAGAATGAGGCCCACACAACAGAGGAGGTCTCTATTCATGAAAACCAAGAC  1775
            ||.|||..|||||||||||||.|||....||..||||||||.|||||.|.|||.||.|||||||||||||||||
Sbjct 1702  TATCTCCGGAAGCAGGAGAAGAGGACGGCGATACCCACACAGCAGAGAAAGTCCCTCTTCATGAAAACCAAGAC  1775

Query 1776  TGTCTCCCTGCAGGAGCTGCAGCAGGACTTTGAGAATGCGCCCCCCACCGACCCCAACAACAACCAGACCC---  1846
            .|||||.||.|||||.||.||.|||||||||||.|.|||.|||.|.||.|||||||||||||||||..|.|   
Sbjct 1776  GGTCTCTCTACAGGAACTCCAACAGGACTTTGAAAGTGCTCCCTCTACTGACCCCAACAACAACCAAGCTCCTG  1849

Query 1847  CGGCTAACGGCAC-CAGCGTGTCCTATATCACCTTCAGCCCTGACAGCTCCTCACCTGC-CCAGAGTGAGCCAC  1918
            |||||.| |||.| ||   |.|||||.|||||||||||.||.|||..||||.||.|||| .|| .||||||..|
Sbjct 1850  CGGCTGA-GGCTCACA---TATCCTACATCACCTTCAGTCCAGACGCCTCCACAGCTGCTGCA-TGTGAGCTGC  1918

Query 1919  CAGCCTCCGCTGAGGCCCCCGGCGAGCCCAGTGACATGCTGGCCAGCGTCCCACCCTTCGTCACCTTCCACACC  1992
            |.||||||.||..|.|||||...|||.|.|||||||..||.|||||.||.||.|||||.||||||||||||||.
Sbjct 1919  CCGCCTCCACTCGGTCCCCCCAGGAGGCTAGTGACACTCTAGCCAGTGTGCCGCCCTTTGTCACCTTCCACACT  1992

Query 1993  CTCATCCTGGACATGAGTGGAGTCAGCTTCGTGGACTTGATGGGCATCAAGGCCCTGGCCAAGCTGAGCTCCAC  2066
            ||||||||.||||||||||||||||||||.|||||.||||||||||||||.||.||.||||||||.||||||||
Sbjct 1993  CTCATCCTTGACATGAGTGGAGTCAGCTTTGTGGATTTGATGGGCATCAAAGCTCTCGCCAAGCTAAGCTCCAC  2066

Query 2067  CTATGGGAAGATCGGCGTGAAGGTCTTCTTGGTGAACATCCATGCCCAGGTGTACAATGACATTAGCCATGGAG  2140
            |||||.|||||||||.||..||.||||..||||.||||||||.|||||||||||.||||||||.|||||.||||
Sbjct 2067  CTATGAGAAGATCGGAGTCCAGATCTTTCTGGTAAACATCCACGCCCAGGTGTATAATGACATCAGCCACGGAG  2140

Query 2141  GCGTCTTTGAGGATGGGAGTCTAGAATGCAAGCACGTCTTTCCCAGCATACATGACGCAGTCCTCTTTGCCCAG  2214
            |.||||||||.||||||.||.||.|..|||..|||||.||.||||||||.||.||.|||||||||||||||||.
Sbjct 2141  GTGTCTTTGAAGATGGGTGTGTACAGCGCAGTCACGTGTTCCCCAGCATCCACGATGCAGTCCTCTTTGCCCAA  2214

Query 2215  GCAAATGCTAGAGACGTGACCCCAGGACACAACTTCCAAGGGGCTCCAGGGGATGCTGAGCTCTCCTTGTACGA  2288
            ||||||||||||||.|   ||||||..|.|||||||||.|||||||||||||||.|||||.||||||||||.||
Sbjct 2215  GCAAATGCTAGAGAAG---CCCCAGACCGCAACTTCCATGGGGCTCCAGGGGATACTGAGTTCTCCTTGTATGA  2285

Query 2289  CTCAGAGGAGGACATTCGCAGCTACTGGGACTTAGAGCAGGAGATGTTCGGGAGCATGTTTCACGCAGAGACCC  2362
            ||||||.|||||...||.||||||.|||||||||||.||||||||||||||||.||||||||||.|||||||||
Sbjct 2286  CTCAGAAGAGGAAGGTCCCAGCTATTGGGACTTAGAACAGGAGATGTTCGGGACCATGTTTCACACAGAGACCC  2359

Query 2363  TGACCGCCCTG  2373
            ||||.||||||
Sbjct 2360  TGACTGCCCTG  2370

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