Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_09418
• Subject: NM_014513.2
• Aligned Length: 1287
• Identities: 753
• Gaps: 432

Alignment

Query    1  ATGTCGCTCATGGTCGTCAGCATGGCGTGTGTTGGGTTCTTCTTGCTGGAGGGGCCCTGGCCACATGTGGGTGG  74
            |||||||||||||||.||||||||||||||||||.|||||||||||||.|||||.||||||||||||.|||   
Sbjct    1  ATGTCGCTCATGGTCATCAGCATGGCGTGTGTTGCGTTCTTCTTGCTGCAGGGGGCCTGGCCACATGAGGG---  71

Query   75  TCAGGACAAGCCCTTCCTCTCTGCCTGGCCCGGCACTGTGGTGTCTGAAGGACAACATGTGACTCTTCAGTGTC  148
                                                                                      
Sbjct   72  --------------------------------------------------------------------------  71

Query  149  GCTCTCATCTTGGGTTTAACGAATTCAGTCTGTCCAAAGAAGACGGGATGCCTGTCCCTGAGCTCTACAACAGA  222
                                                                                      
Sbjct   72  --------------------------------------------------------------------------  71

Query  223  ATATTCCGGAACAGCTTTCTCATGGGCCCTGTGACCCCAGCACATGCAGGGACCTACAGATGTTGCAGTTCACA  296
              ||||||                                                                  
Sbjct   72  --ATTCCG------------------------------------------------------------------  77

Query  297  CCCACACTCCCCCACTGGGTGGTCGGCACCCAGCAACCCTGTGGTGATCATGGTCACAGGAGTCCACAGAAAAC  370
                                                                              ||||||||
Sbjct   78  ------------------------------------------------------------------CAGAAAAC  85

Query  371  CTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCGGGAGAGACGGTCATCCTGCAATGTTGGTCAGATGTC  444
            |||||||||||||||||||||||||||||||||||||.|.||||||.|||||||||||||||||||||||||||
Sbjct   86  CTTCCCTCCTGGCCCACCCAGGTCCCCTGGTGAAATCAGAAGAGACAGTCATCCTGCAATGTTGGTCAGATGTC  159

Query  445  AGGTTTGAGCGCTTCCTTCTGCACAGAGAGGGGA----TCACTGAGGACCCCTTGCGCCTCGTTGGACAGCTCC  514
            |.||||||||.|||||||||||||||||||||||    |.||    .||.|.|||||||||.|||||.|||.|.
Sbjct  160  ATGTTTGAGCACTTCCTTCTGCACAGAGAGGGGACGTTTAAC----CACACTTTGCGCCTCATTGGAGAGCACA  229

Query  515  ACGATGCGGGT-TCCCAGGTCAACTATTCCATGGGTCCCATGACACCTGCCCTTGCAGGGACCTACAGATGCTT  587
            ..|||| |||| |||.|||.|||||..|||||.||||.||||||||..|.|||.|||||||||||||||||||.
Sbjct  230  TTGATG-GGGTCTCCAAGGGCAACTTCTCCATCGGTCGCATGACACAAGACCTGGCAGGGACCTACAGATGCTA  302

Query  588  TGGTTCTGTCACTCACTTACCCTATGAGTTGTCGGCTCCCAGTGACCCTCTGGACATCGTGGTCGTAGGTCTAT  661
            .||||||||.|||||||..||||||.|||||||.||.||||||||||||||||||||||||.||..||||||||
Sbjct  303  CGGTTCTGTTACTCACTCCCCCTATCAGTTGTCAGCGCCCAGTGACCCTCTGGACATCGTGATCACAGGTCTAT  376

Query  662  ATGGGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCAGGCAGGAGAGAATGTGACCTTGTCCTGCAGC  735
            |||.||||||||||||||||||||||||||||||||||||||.|||||||||||..||||||||||||||||||
Sbjct  377  ATGAGAAACCTTCTCTCTCAGCCCAGCCGGGCCCCACGGTTCTGGCAGGAGAGAGCGTGACCTTGTCCTGCAGC  450

Query  736  TCCCGGAGCTTGTTTGACATTTACCATCTATCCAGGGAGGCAGAGGCCGGTGAACTTAGGCTCACTGCGGTGCT  809
            ||||||||||..|.||||||.|||||||||||||||||.|..||||||..|||||.|||||||.||||.|.||.
Sbjct  451  TCCCGGAGCTCCTATGACATGTACCATCTATCCAGGGAAGGGGAGGCCCATGAACGTAGGCTCCCTGCAGGGCC  524

Query  810  GAGGGTCAATGGAACATTCCAGGCCAACTTCCCTCTGGGCCCTGTGACCCACGGAGGGAACTACAGATGCTTCG  883
            .|.||||||..||||||||||||||.||||.|||||||.|||||..|||||||||||||.||||||||||||||
Sbjct  525  CAAGGTCAACAGAACATTCCAGGCCGACTTTCCTCTGGACCCTGCCACCCACGGAGGGACCTACAGATGCTTCG  598

Query  884  GCTCTTTCCGTG-CCCTGCCCCACGCGTGGTCAGACCCGAGTGACCCACTGCCCGTTTCTGTCACA--------  948
            |||||||||||| |.|| ||..|||.|||||||.|..|.|||||||||||||..||||||||||||        
Sbjct  599  GCTCTTTCCGTGACTCT-CCATACGAGTGGTCAAAGTCAAGTGACCCACTGCTTGTTTCTGTCACAGGAAACTC  671

Query  949  -------------------------------------------GGTAACTCCAGATACCTGCACGCTCTGATTG  979
                                                       ||||||.|||||.||||.||||.||||||||
Sbjct  672  TTCAAATAGTTGGCCTTCACCCACTGAACCAAGCTCCGAAACCGGTAACCCCAGACACCTACACGTTCTGATTG  745

Query  980  GGACCTCAGTGGTCATCATCCCCTTTGCTATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGTGCCAACAAAAAG  1053
            |||||||||||||||...||||.||..|.||||||||||||||||||||||||||||||||..||||||||||.
Sbjct  746  GGACCTCAGTGGTCAAACTCCCTTTCACCATCCTCCTCTTCTTTCTCCTTCATCGCTGGTGCTCCAACAAAAAA  819

Query 1054  AATGCTGTTGTAATGGACCAAGAGCCTGCAGGGAACAGAACAGTGAACAGGGAGGACTCTGATGAACAAGACCC  1127
            |||||...||||||||||||||.||||||.||||||||||||||||||||||||||.|||||||||||.||||.
Sbjct  820  AATGCATCTGTAATGGACCAAGGGCCTGCGGGGAACAGAACAGTGAACAGGGAGGATTCTGATGAACAGGACCA  893

Query 1128  TCAGGAGGTGACATACGCACAGTTGAATCACTGCGTTTTCACACAGAGAAAAATCACTCGCCCTTCTCAGAGGC  1201
            ||||||||||.||||||||                                                       
Sbjct  894  TCAGGAGGTGTCATACGCA-------------------------------------------------------  912

Query 1202  CCAAGACACCCCCAACAGATACCAGCGTG  1230
                                         
Sbjct  913  -----------------------------  912